RNA–Protein interactions for RNA: ENST00000560333.1

PDE8A-212, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-212ENST00000560333 SALL2Q9Y467 1007 aaPredicted RBP14.64□□□□□ -0.07
PDE8A-212ENST00000560333 CLTCL1P53675 1640 aa14.63□□□□□ -0.07
PDE8A-212ENST00000560333 NEUROD1Q13562 356 aa14.62□□□□□ -0.07
PDE8A-212ENST00000560333 CABLES1Q8TDN4 633 aa14.62□□□□□ -0.07
PDE8A-212ENST00000560333 MINK1Q8N4C8 1332 aaPredicted RBP14.62□□□□□ -0.07
PDE8A-212ENST00000560333 TIMELESSQ9UNS1 1208 aa14.61□□□□□ -0.07
PDE8A-212ENST00000560333 PKDCCQ504Y2 493 aa14.6□□□□□ -0.07
PDE8A-212ENST00000560333 BRICD5Q6PL45 260 aa14.6□□□□□ -0.07
PDE8A-212ENST00000560333 FAM160A2Q8N612 972 aaPredicted RBP14.6□□□□□ -0.07
PDE8A-212ENST00000560333 NRAPQ86VF7 1730 aa14.6□□□□□ -0.07
PDE8A-212ENST00000560333 GDF9O60383 454 aa14.59□□□□□ -0.07
PDE8A-212ENST00000560333 DGAT1O75907 488 aa14.59□□□□□ -0.07
PDE8A-212ENST00000560333 ROBO2Q9HCK4 1378 aa14.59□□□□□ -0.07
PDE8A-212ENST00000560333 ZBTB7AO95365 584 aa14.58□□□□□ -0.08
PDE8A-212ENST00000560333 CD46P15529 392 aa14.58□□□□□ -0.08
PDE8A-212ENST00000560333 SPATA31A3Q5VYP0 1347 aa14.58□□□□□ -0.08
PDE8A-212ENST00000560333 THSD7AQ9UPZ6 1657 aa14.58□□□□□ -0.08
PDE8A-212ENST00000560333 SPATA31E1Q6ZUB1 1445 aa14.58□□□□□ -0.08
PDE8A-212ENST00000560333 TNFRSF10AO00220 468 aa14.57□□□□□ -0.08
PDE8A-212ENST00000560333 RPIAP49247 311 aa14.57□□□□□ -0.08
PDE8A-212ENST00000560333 FHDC1Q9C0D6 1143 aaPredicted RBP14.57□□□□□ -0.08
PDE8A-212ENST00000560333 FCF1Q9Y324 198 aaKnown RBP14.57□□□□□ -0.08
PDE8A-212ENST00000560333 ABCA3Q99758 1704 aa14.57□□□□□ -0.08
PDE8A-212ENST00000560333 LRPPRCP42704 1394 aaKnown RBP14.57□□□□□ -0.08
PDE8A-212ENST00000560333 MDM2Q00987 491 aaPredicted RBP14.56□□□□□ -0.08
PDE8A-212ENST00000560333 L3MBTL2Q969R5 705 aa14.56□□□□□ -0.08
PDE8A-212ENST00000560333 SYT17Q9BSW7 474 aa14.56□□□□□ -0.08
PDE8A-212ENST00000560333 KIF1BO60333 1816 aa14.56□□□□□ -0.08
PDE8A-212ENST00000560333 CCDC144AA2RUR9 1427 aa14.56□□□□□ -0.08
PDE8A-212ENST00000560333 SHANK3Q9BYB0 1731 aa14.55□□□□□ -0.08
PDE8A-212ENST00000560333 CASZ1Q86V15 1759 aa14.55□□□□□ -0.08
PDE8A-212ENST00000560333 CD2BP2O95400 341 aaKnown RBP14.55□□□□□ -0.08
PDE8A-212ENST00000560333 ZNF787Q6DD87 383 aa14.55□□□□□ -0.08
PDE8A-212ENST00000560333 Q3C1V9 767 aa14.54□□□□□ -0.08
PDE8A-212ENST00000560333 ZNF326Q5BKZ1 582 aaKnown RBP14.54□□□□□ -0.08
PDE8A-212ENST00000560333 FAM196AQ6ZSG2 479 aa14.54□□□□□ -0.08
PDE8A-212ENST00000560333 PDGFDQ9GZP0 370 aaPredicted RBP14.54□□□□□ -0.08
PDE8A-212ENST00000560333 BTG4Q9NY30 223 aa14.54□□□□□ -0.08
PDE8A-212ENST00000560333 DLC1Q96QB1 1528 aa14.54□□□□□ -0.08
PDE8A-212ENST00000560333 CDC42BPGQ6DT37 1551 aa14.53□□□□□ -0.08
PDE8A-212ENST00000560333 KDM4AO75164 1064 aa14.53□□□□□ -0.08
PDE8A-212ENST00000560333 MSS51Q4VC12 460 aa14.53□□□□□ -0.08
PDE8A-212ENST00000560333 LMOD2Q6P5Q4 547 aa14.53□□□□□ -0.08
PDE8A-212ENST00000560333 RNF19BQ6ZMZ0 732 aa14.53□□□□□ -0.08
PDE8A-212ENST00000560333 IFT172Q9UG01 1749 aa14.52□□□□□ -0.08
PDE8A-212ENST00000560333 TNS3Q68CZ2 1445 aa14.52□□□□□ -0.08
PDE8A-212ENST00000560333 TONSLQ96HA7 1378 aa14.52□□□□□ -0.08
PDE8A-212ENST00000560333 FAM83GA6ND36 823 aa14.52□□□□□ -0.09
PDE8A-212ENST00000560333 HSPA6P17066 643 aa14.52□□□□□ -0.09
PDE8A-212ENST00000560333 FOXC1Q12948 553 aa14.52□□□□□ -0.09
PDE8A-212ENST00000560333 FAM187AA6NFU0 413 aa14.51□□□□□ -0.09
PDE8A-212ENST00000560333 GPR162Q16538 588 aa14.51□□□□□ -0.09
PDE8A-212ENST00000560333 CCDC102AQ96A19 550 aa14.51□□□□□ -0.09
PDE8A-212ENST00000560333 PRDM9Q9NQV7 894 aa14.51□□□□□ -0.09
PDE8A-212ENST00000560333 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.5□□□□□ -0.09
PDE8A-212ENST00000560333 SPATA31A5Q5VU36 1347 aa14.49□□□□□ -0.09
PDE8A-212ENST00000560333 SPATA31A7Q8IWB4 1347 aa14.49□□□□□ -0.09
PDE8A-212ENST00000560333 USP46P62068 366 aa14.49□□□□□ -0.09
PDE8A-212ENST00000560333 KRT28Q7Z3Y7 464 aa14.49□□□□□ -0.09
PDE8A-212ENST00000560333 PKD2L1Q9P0L9 805 aa14.49□□□□□ -0.09
PDE8A-212ENST00000560333 NEXMIFQ5QGS0 1516 aa14.48□□□□□ -0.09
PDE8A-212ENST00000560333 ZBTB24O43167 697 aaPredicted RBP14.48□□□□□ -0.09
PDE8A-212ENST00000560333 PPLO60437 1756 aa14.47□□□□□ -0.09
PDE8A-212ENST00000560333 CLCN1P35523 988 aa14.47□□□□□ -0.09
PDE8A-212ENST00000560333 COL13A1Q5TAT6 717 aaPredicted RBP14.47□□□□□ -0.09
PDE8A-212ENST00000560333 KIF1AQ12756 1690 aa14.46□□□□□ -0.09
PDE8A-212ENST00000560333 KRI1Q8N9T8 703 aaKnown RBP14.46□□□□□ -0.09
PDE8A-212ENST00000560333 GPCPD1Q9NPB8 672 aa14.46□□□□□ -0.09
PDE8A-212ENST00000560333 COL14A1Q05707 1796 aaKnown RBP14.45□□□□□ -0.1
PDE8A-212ENST00000560333 PRELPP51888 382 aa14.44□□□□□ -0.1
PDE8A-212ENST00000560333 RGL3Q3MIN7 710 aa14.44□□□□□ -0.1
PDE8A-212ENST00000560333 TNS4Q8IZW8 715 aa14.44□□□□□ -0.1
PDE8A-212ENST00000560333 USB1Q9BQ65 265 aaKnown RBP14.44□□□□□ -0.1
PDE8A-212ENST00000560333 ATP10DQ9P241 1426 aa14.42□□□□□ -0.1
PDE8A-212ENST00000560333 TRPM1Q7Z4N2 1603 aa14.42□□□□□ -0.1
PDE8A-212ENST00000560333 MMP16P51512 607 aa14.42□□□□□ -0.1
PDE8A-212ENST00000560333 PDE3BQ13370 1112 aa14.42□□□□□ -0.1
PDE8A-212ENST00000560333 DCAF11Q8TEB1 546 aa14.42□□□□□ -0.1
PDE8A-212ENST00000560333 FAM217BQ9NTX9 383 aaPredicted RBP14.42□□□□□ -0.1
PDE8A-212ENST00000560333 NRXN1Q9ULB1 1477 aa14.42□□□□□ -0.1
PDE8A-212ENST00000560333 PRAG1Q86YV5 1406 aa14.41□□□□□ -0.1
PDE8A-212ENST00000560333 ARHGEF10O15013 1369 aa14.4□□□□□ -0.1
PDE8A-212ENST00000560333 HOXA2O43364 376 aa14.4□□□□□ -0.1
PDE8A-212ENST00000560333 CYP4X1Q8N118 509 aa14.4□□□□□ -0.1
PDE8A-212ENST00000560333 USP35Q9P2H5 1018 aa14.4□□□□□ -0.1
PDE8A-212ENST00000560333 ZNF526Q8TF50 670 aaPredicted RBP14.39□□□□□ -0.11
PDE8A-212ENST00000560333 HLA-CQ95604 372 aa14.39□□□□□ -0.11
PDE8A-212ENST00000560333 TECPR2O15040 1411 aa14.39□□□□□ -0.11
PDE8A-212ENST00000560333 SPATA31A1Q5TZJ5 1347 aa14.39□□□□□ -0.11
PDE8A-212ENST00000560333 RPGRIP1LQ68CZ1 1315 aa14.39□□□□□ -0.11
PDE8A-212ENST00000560333 GOLGB1Q14789 3259 aaKnown RBP14.38□□□□□ -0.11
PDE8A-212ENST00000560333 PSME1Q06323 249 aa14.38□□□□□ -0.11
PDE8A-212ENST00000560333 NUTM1Q86Y26 1132 aa14.38□□□□□ -0.11
PDE8A-212ENST00000560333 ARXQ96QS3 562 aa14.38□□□□□ -0.11
PDE8A-212ENST00000560333 GPBP1L1Q9HC44 474 aaPredicted RBP14.38□□□□□ -0.11
PDE8A-212ENST00000560333 STRN4Q9NRL3 753 aa14.38□□□□□ -0.11
PDE8A-212ENST00000560333 TOR4AQ9NXH8 423 aa14.38□□□□□ -0.11
PDE8A-212ENST00000560333 FMN2Q9NZ56 1722 aa14.38□□□□□ -0.11
PDE8A-212ENST00000560333 KIAA1210Q9ULL0 1709 aa14.38□□□□□ -0.11
PDE8A-212ENST00000560333 DXOO77932 396 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms