RNA–Protein interactions for RNA: ENST00000560321.5

KNSTRN-210, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-210ENST00000560321 TGFB2P61812 414 aa26.12■■□□□ 1.77
KNSTRN-210ENST00000560321 ZNF496Q96IT1 587 aaPredicted RBP26.11■■□□□ 1.77
KNSTRN-210ENST00000560321 COL15A1P39059 1388 aa26.1■■□□□ 1.77
KNSTRN-210ENST00000560321 CANXP27824 592 aaKnown RBP26.09■■□□□ 1.77
KNSTRN-210ENST00000560321 NARFQ9UHQ1 456 aa26.09■■□□□ 1.77
KNSTRN-210ENST00000560321 ZBTB1Q9Y2K1 713 aa26.09■■□□□ 1.77
KNSTRN-210ENST00000560321 MYBBP1AQ9BQG0 1328 aaKnown RBP26.09■■□□□ 1.77
KNSTRN-210ENST00000560321 MCM10Q7L590 875 aa26.08■■□□□ 1.77
KNSTRN-210ENST00000560321 SRP68Q9UHB9 627 aaKnown RBP26.08■■□□□ 1.77
KNSTRN-210ENST00000560321 YBX3P16989 372 aaKnown RBP eCLIP26.07■■□□□ 1.76
KNSTRN-210ENST00000560321 USPL1Q5W0Q7 1092 aa26.07■■□□□ 1.76
KNSTRN-210ENST00000560321 PNISRQ8TF01 805 aaKnown RBP26.07■■□□□ 1.76
KNSTRN-210ENST00000560321 TAF7Q15545 349 aaPredicted RBP26.06■■□□□ 1.76
KNSTRN-210ENST00000560321 FKBP8Q14318 412 aa26.05■■□□□ 1.76
KNSTRN-210ENST00000560321 N4BP2Q86UW6 1770 aaPredicted RBP26.05■■□□□ 1.76
KNSTRN-210ENST00000560321 C10orf71Q711Q0 1435 aa26.05■■□□□ 1.76
KNSTRN-210ENST00000560321 SNRPA1P09661 255 aaKnown RBP26.04■■□□□ 1.76
KNSTRN-210ENST00000560321 IL6STP40189 918 aaPredicted RBP26.03■■□□□ 1.76
KNSTRN-210ENST00000560321 NFE2L2Q16236 605 aa26.03■■□□□ 1.76
KNSTRN-210ENST00000560321 ZNF330Q9Y3S2 320 aaPredicted RBP26.03■■□□□ 1.76
KNSTRN-210ENST00000560321 EIF5P55010 431 aaKnown RBP26.02■■□□□ 1.76
KNSTRN-210ENST00000560321 ZNF784Q8NCA9 323 aaPredicted RBP26.02■■□□□ 1.76
KNSTRN-210ENST00000560321 PLEKHF1Q96S99 279 aa26.02■■□□□ 1.76
KNSTRN-210ENST00000560321 WDR43Q15061 677 aaKnown RBP eCLIP26.01■■□□□ 1.75
KNSTRN-210ENST00000560321 LMOD3Q0VAK6 560 aa26■■□□□ 1.75
KNSTRN-210ENST00000560321 DCTN1Q14203 1278 aa26■■□□□ 1.75
KNSTRN-210ENST00000560321 PXDNLA1KZ92 1463 aa25.99■■□□□ 1.75
KNSTRN-210ENST00000560321 TM4SF1P30408 202 aa25.99■■□□□ 1.75
KNSTRN-210ENST00000560321 AFDNP55196 1824 aaKnown RBP25.98■■□□□ 1.75
KNSTRN-210ENST00000560321 POLRMTO00411 1230 aaKnown RBP25.98■■□□□ 1.75
KNSTRN-210ENST00000560321 A0A0G2JLW4 131 aa25.97■■□□□ 1.75
KNSTRN-210ENST00000560321 BRCA1P38398 1863 aaKnown RBP25.97■■□□□ 1.75
KNSTRN-210ENST00000560321 KCNQ3O43525 872 aa25.96■■□□□ 1.75
KNSTRN-210ENST00000560321 DDR1Q08345 913 aa25.96■■□□□ 1.75
KNSTRN-210ENST00000560321 NFIXQ14938 502 aa25.96■■□□□ 1.75
KNSTRN-210ENST00000560321 PIM2Q9P1W9 311 aa25.96■■□□□ 1.75
KNSTRN-210ENST00000560321 WWC3Q9ULE0 1092 aa25.96■■□□□ 1.75
KNSTRN-210ENST00000560321 BCS1LQ9Y276 419 aa25.96■■□□□ 1.75
KNSTRN-210ENST00000560321 KIAA1551Q9HCM1 1747 aa25.96■■□□□ 1.75
KNSTRN-210ENST00000560321 UTRNP46939 3433 aa25.95■■□□□ 1.75
KNSTRN-210ENST00000560321 A1BGP04217 495 aa25.95■■□□□ 1.74
KNSTRN-210ENST00000560321 DPEP1P16444 411 aa25.95■■□□□ 1.74
KNSTRN-210ENST00000560321 ARFGEF1Q9Y6D6 1849 aa25.95■■□□□ 1.74
KNSTRN-210ENST00000560321 SCN7AQ01118 1682 aa25.94■■□□□ 1.74
KNSTRN-210ENST00000560321 ZNF652Q9Y2D9 606 aa25.94■■□□□ 1.74
KNSTRN-210ENST00000560321 LAMB4A4D0S4 1761 aa25.94■■□□□ 1.74
KNSTRN-210ENST00000560321 KDM3BQ7LBC6 1761 aa25.94■■□□□ 1.74
KNSTRN-210ENST00000560321 NPHP1O15259 732 aa25.93■■□□□ 1.74
KNSTRN-210ENST00000560321 SERPINB2P05120 415 aa25.93■■□□□ 1.74
KNSTRN-210ENST00000560321 RIPK4P57078 832 aa25.93■■□□□ 1.74
KNSTRN-210ENST00000560321 TBC1D2BQ9UPU7 963 aa25.93■■□□□ 1.74
KNSTRN-210ENST00000560321 USP16Q9Y5T5 823 aa25.93■■□□□ 1.74
KNSTRN-210ENST00000560321 DZIP3Q86Y13 1208 aaKnown RBP25.92■■□□□ 1.74
KNSTRN-210ENST00000560321 NRXN2Q9P2S2 1712 aa25.91■■□□□ 1.74
KNSTRN-210ENST00000560321 DALRD3Q5D0E6 543 aaKnown RBP25.91■■□□□ 1.74
KNSTRN-210ENST00000560321 BICDL1Q6ZP65 573 aa25.91■■□□□ 1.74
KNSTRN-210ENST00000560321 PRKRIP1Q9H875 184 aaPredicted RBP25.91■■□□□ 1.74
KNSTRN-210ENST00000560321 PDZRN3Q9UPQ7 1066 aa25.91■■□□□ 1.74
KNSTRN-210ENST00000560321 SETDB2Q96T68 719 aa25.9■■□□□ 1.74
KNSTRN-210ENST00000560321 BCL2L12Q9HB09 334 aa25.9■■□□□ 1.74
KNSTRN-210ENST00000560321 CARMIL3Q8ND23 1372 aa25.9■■□□□ 1.74
KNSTRN-210ENST00000560321 GOLGB1Q14789 3259 aaKnown RBP25.9■■□□□ 1.74
KNSTRN-210ENST00000560321 BCORQ6W2J9 1755 aa25.9■■□□□ 1.74
KNSTRN-210ENST00000560321 BABAM1Q9NWV8 329 aa25.89■■□□□ 1.74
KNSTRN-210ENST00000560321 RGL2O15211 777 aa25.88■■□□□ 1.73
KNSTRN-210ENST00000560321 TMPOP42166 694 aaKnown RBP25.88■■□□□ 1.73
KNSTRN-210ENST00000560321 CLEC4GQ6UXB4 293 aa25.88■■□□□ 1.73
KNSTRN-210ENST00000560321 RUNDC1Q96C34 613 aa25.88■■□□□ 1.73
KNSTRN-210ENST00000560321 MIS18AQ9NYP9 233 aa25.88■■□□□ 1.73
KNSTRN-210ENST00000560321 ARHGAP27Q6ZUM4 889 aa25.87■■□□□ 1.73
KNSTRN-210ENST00000560321 TSPYL4Q9UJ04 414 aa25.87■■□□□ 1.73
KNSTRN-210ENST00000560321 TBC1D9BQ66K14 1250 aa25.86■■□□□ 1.73
KNSTRN-210ENST00000560321 H0YIN7 160 aa25.85■■□□□ 1.73
KNSTRN-210ENST00000560321 CAMTA2O94983 1202 aa25.85■■□□□ 1.73
KNSTRN-210ENST00000560321 PDE6BP35913 854 aa25.85■■□□□ 1.73
KNSTRN-210ENST00000560321 THUMPD2Q9BTF0 503 aaKnown RBP25.85■■□□□ 1.73
KNSTRN-210ENST00000560321 DLEC1Q9Y238 1755 aa25.84■■□□□ 1.73
KNSTRN-210ENST00000560321 PRAMEF22A3QJZ6 481 aa25.84■■□□□ 1.73
KNSTRN-210ENST00000560321 GIGYF1O75420 1035 aaPredicted RBP25.84■■□□□ 1.73
KNSTRN-210ENST00000560321 EIF4A1P60842 406 aaKnown RBP25.84■■□□□ 1.73
KNSTRN-210ENST00000560321 ST5P78524 1137 aa25.84■■□□□ 1.73
KNSTRN-210ENST00000560321 KCNA3P22001 575 aa25.83■■□□□ 1.73
KNSTRN-210ENST00000560321 CNBD1Q8NA66 436 aa25.83■■□□□ 1.73
KNSTRN-210ENST00000560321 GPBP1L1Q9HC44 474 aaPredicted RBP25.83■■□□□ 1.73
KNSTRN-210ENST00000560321 CHRNA5P30532 468 aa25.82■■□□□ 1.72
KNSTRN-210ENST00000560321 NEUROD2Q15784 382 aa25.82■■□□□ 1.72
KNSTRN-210ENST00000560321 CCDC146Q8IYE0 955 aa25.82■■□□□ 1.72
KNSTRN-210ENST00000560321 BRIP1Q9BX63 1249 aa25.82■■□□□ 1.72
KNSTRN-210ENST00000560321 ATP10DQ9P241 1426 aa25.81■■□□□ 1.72
KNSTRN-210ENST00000560321 PIP4K2AP48426 406 aaPredicted RBP25.81■■□□□ 1.72
KNSTRN-210ENST00000560321 C2CD5Q86YS7 1000 aa25.81■■□□□ 1.72
KNSTRN-210ENST00000560321 ERBB4Q15303 1308 aa25.81■■□□□ 1.72
KNSTRN-210ENST00000560321 KIF6Q6ZMV9 814 aa25.8■■□□□ 1.72
KNSTRN-210ENST00000560321 TTLL6Q8N841 843 aa25.8■■□□□ 1.72
KNSTRN-210ENST00000560321 ADAMTS8Q9UP79 889 aa25.8■■□□□ 1.72
KNSTRN-210ENST00000560321 NBPF5PQ86XG9 351 aaPredicted RBP25.79■■□□□ 1.72
KNSTRN-210ENST00000560321 NBPF26B4DH59 902 aa25.78■■□□□ 1.72
KNSTRN-210ENST00000560321 NBPF10Q6P3W6 841 aaKnown RBP25.78■■□□□ 1.72
KNSTRN-210ENST00000560321 NBPF15Q8N660 670 aa25.78■■□□□ 1.72
KNSTRN-210ENST00000560321 ADCY9O60503 1353 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms