RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 NBPF14Q5TI25 921 aa18.46■□□□□ 0.55
SMAD6-204ENST00000559931 LINC00116Q8NCU8 138 aa18.46■□□□□ 0.55
SMAD6-204ENST00000559931 SOS1Q07889 1333 aaPredicted RBP18.46■□□□□ 0.55
SMAD6-204ENST00000559931 PSDA5PKW4 1024 aaPredicted RBP18.45■□□□□ 0.54
SMAD6-204ENST00000559931 TCERG1O14776 1098 aaKnown RBP18.45■□□□□ 0.54
SMAD6-204ENST00000559931 A1BGP04217 495 aa18.45■□□□□ 0.54
SMAD6-204ENST00000559931 CRKLP46109 303 aaKnown RBP18.45■□□□□ 0.54
SMAD6-204ENST00000559931 CCDC30Q5VVM6 783 aa18.45■□□□□ 0.54
SMAD6-204ENST00000559931 C5P01031 1676 aa18.44■□□□□ 0.54
SMAD6-204ENST00000559931 CANXP27824 592 aaKnown RBP18.44■□□□□ 0.54
SMAD6-204ENST00000559931 NPM2Q86SE8 214 aaKnown RBP18.44■□□□□ 0.54
SMAD6-204ENST00000559931 AK7Q96M32 723 aa18.44■□□□□ 0.54
SMAD6-204ENST00000559931 STK31Q9BXU1 1019 aa18.44■□□□□ 0.54
SMAD6-204ENST00000559931 CCDC87Q9NVE4 849 aa18.44■□□□□ 0.54
SMAD6-204ENST00000559931 ZNF330Q9Y3S2 320 aaPredicted RBP18.44■□□□□ 0.54
SMAD6-204ENST00000559931 TAF1LQ8IZX4 1826 aa18.44■□□□□ 0.54
SMAD6-204ENST00000559931 ZNF831Q5JPB2 1677 aa18.44■□□□□ 0.54
SMAD6-204ENST00000559931 TJP1Q07157 1748 aa18.43■□□□□ 0.54
SMAD6-204ENST00000559931 PIP4K2AP48426 406 aaPredicted RBP18.43■□□□□ 0.54
SMAD6-204ENST00000559931 R3HDM1Q15032 1099 aaKnown RBP18.43■□□□□ 0.54
SMAD6-204ENST00000559931 ANO8Q9HCE9 1232 aaPredicted RBP18.43■□□□□ 0.54
SMAD6-204ENST00000559931 CT47B1P0C2W7 299 aaPredicted RBP18.42■□□□□ 0.54
SMAD6-204ENST00000559931 MYL6BP14649 208 aa18.42■□□□□ 0.54
SMAD6-204ENST00000559931 RC3H1Q5TC82 1133 aaKnown RBP18.42■□□□□ 0.54
SMAD6-204ENST00000559931 ARXQ96QS3 562 aa18.42■□□□□ 0.54
SMAD6-204ENST00000559931 LAMB4A4D0S4 1761 aa18.41■□□□□ 0.54
SMAD6-204ENST00000559931 GNPATO15228 680 aa18.41■□□□□ 0.54
SMAD6-204ENST00000559931 INTS5Q6P9B9 1019 aaKnown RBP18.41■□□□□ 0.54
SMAD6-204ENST00000559931 STK32BQ9NY57 414 aa18.41■□□□□ 0.54
SMAD6-204ENST00000559931 TFCP2L1Q9NZI6 479 aa18.41■□□□□ 0.54
SMAD6-204ENST00000559931 CHPF2Q9P2E5 772 aa18.41■□□□□ 0.54
SMAD6-204ENST00000559931 DBF4Q9UBU7 674 aaPredicted RBP18.41■□□□□ 0.54
SMAD6-204ENST00000559931 ZBTB1Q9Y2K1 713 aa18.4■□□□□ 0.54
SMAD6-204ENST00000559931 RTCBQ9Y3I0 505 aaKnown RBP18.4■□□□□ 0.54
SMAD6-204ENST00000559931 CNTNAP4Q9C0A0 1308 aa18.4■□□□□ 0.54
SMAD6-204ENST00000559931 COL5A3P25940 1745 aaPredicted RBP18.4■□□□□ 0.54
SMAD6-204ENST00000559931 MYH14Q7Z406 1995 aaKnown RBP18.39■□□□□ 0.53
SMAD6-204ENST00000559931 ANXA1P04083 346 aa18.39■□□□□ 0.53
SMAD6-204ENST00000559931 SLC4A2P04920 1241 aa18.39■□□□□ 0.53
SMAD6-204ENST00000559931 ZNF428Q96B54 188 aa18.39■□□□□ 0.53
SMAD6-204ENST00000559931 DDX21Q9NR30 783 aaKnown RBP eCLIP18.39■□□□□ 0.53
SMAD6-204ENST00000559931 C4BP0C0L5 1744 aa18.39■□□□□ 0.53
SMAD6-204ENST00000559931 ERBB4Q15303 1308 aa18.39■□□□□ 0.53
SMAD6-204ENST00000559931 NBPF26B4DH59 902 aa18.38■□□□□ 0.53
SMAD6-204ENST00000559931 RPS6KA4O75676 772 aa18.38■□□□□ 0.53
SMAD6-204ENST00000559931 PHF14O94880 888 aa18.38■□□□□ 0.53
SMAD6-204ENST00000559931 SLC15A2Q16348 729 aa18.38■□□□□ 0.53
SMAD6-204ENST00000559931 ZNF827Q17R98 1081 aa18.38■□□□□ 0.53
SMAD6-204ENST00000559931 NBPF10Q6P3W6 841 aaKnown RBP18.38■□□□□ 0.53
SMAD6-204ENST00000559931 NBPF15Q8N660 670 aa18.38■□□□□ 0.53
SMAD6-204ENST00000559931 BCL2L13Q9BXK5 485 aa18.38■□□□□ 0.53
SMAD6-204ENST00000559931 HYPKQ9NX55 129 aa18.38■□□□□ 0.53
SMAD6-204ENST00000559931 MSH5O43196 834 aa18.37■□□□□ 0.53
SMAD6-204ENST00000559931 AIMP1Q12904 312 aaKnown RBP18.37■□□□□ 0.53
SMAD6-204ENST00000559931 PROSER3Q2NL68 480 aa18.37■□□□□ 0.53
SMAD6-204ENST00000559931 SSH1Q8WYL5 1049 aa18.37■□□□□ 0.53
SMAD6-204ENST00000559931 SMC4Q9NTJ3 1288 aa18.37■□□□□ 0.53
SMAD6-204ENST00000559931 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
SMAD6-204ENST00000559931 TUBGCP6Q96RT7 1819 aa18.37■□□□□ 0.53
SMAD6-204ENST00000559931 IL6STP40189 918 aaPredicted RBP18.36■□□□□ 0.53
SMAD6-204ENST00000559931 PDIA6Q15084 440 aa18.36■□□□□ 0.53
SMAD6-204ENST00000559931 ALDH1L2Q3SY69 923 aa18.36■□□□□ 0.53
SMAD6-204ENST00000559931 TRAPPC3LQ5T215 181 aa18.36■□□□□ 0.53
SMAD6-204ENST00000559931 SMIM5Q71RC9 77 aa18.36■□□□□ 0.53
SMAD6-204ENST00000559931 AKT1S1Q96B36 256 aa18.36■□□□□ 0.53
SMAD6-204ENST00000559931 RCAN3Q9UKA8 241 aa18.36■□□□□ 0.53
SMAD6-204ENST00000559931 CACNA1FO60840 1977 aa18.35■□□□□ 0.53
SMAD6-204ENST00000559931 A0A087WZG4 1122 aa18.35■□□□□ 0.53
SMAD6-204ENST00000559931 RARSP54136 660 aaKnown RBP18.35■□□□□ 0.53
SMAD6-204ENST00000559931 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.34■□□□□ 0.53
SMAD6-204ENST00000559931 EIF5P55010 431 aaKnown RBP18.34■□□□□ 0.53
SMAD6-204ENST00000559931 COPS6Q7L5N1 327 aa18.34■□□□□ 0.53
SMAD6-204ENST00000559931 XAGE3Q8WTP9 111 aa18.34■□□□□ 0.53
SMAD6-204ENST00000559931 RFC4P35249 363 aa18.33■□□□□ 0.52
SMAD6-204ENST00000559931 KIF6Q6ZMV9 814 aa18.33■□□□□ 0.52
SMAD6-204ENST00000559931 MRPL50Q8N5N7 158 aaKnown RBP18.33■□□□□ 0.52
SMAD6-204ENST00000559931 FLAD1Q8NFF5 587 aa18.33■□□□□ 0.52
SMAD6-204ENST00000559931 PHAXQ9H814 394 aaKnown RBP18.33■□□□□ 0.52
SMAD6-204ENST00000559931 TBC1D2BQ9UPU7 963 aa18.33■□□□□ 0.52
SMAD6-204ENST00000559931 ZPR1O75312 459 aa18.32■□□□□ 0.52
SMAD6-204ENST00000559931 BCAR3O75815 825 aa18.32■□□□□ 0.52
SMAD6-204ENST00000559931 SSFA2P28290 1259 aa18.32■□□□□ 0.52
SMAD6-204ENST00000559931 G2E3Q7L622 706 aa18.32■□□□□ 0.52
SMAD6-204ENST00000559931 DZIP3Q86Y13 1208 aaKnown RBP18.32■□□□□ 0.52
SMAD6-204ENST00000559931 ARHGEF1Q92888 912 aaKnown RBP18.32■□□□□ 0.52
SMAD6-204ENST00000559931 PDGFDQ9GZP0 370 aaPredicted RBP18.32■□□□□ 0.52
SMAD6-204ENST00000559931 COL15A1P39059 1388 aa18.31■□□□□ 0.52
SMAD6-204ENST00000559931 DDX58O95786 925 aaKnown RBP18.31■□□□□ 0.52
SMAD6-204ENST00000559931 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
SMAD6-204ENST00000559931 ADRA2BP18089 450 aa18.31■□□□□ 0.52
SMAD6-204ENST00000559931 FRAT1Q92837 279 aaPredicted RBP18.31■□□□□ 0.52
SMAD6-204ENST00000559931 UBR3Q6ZT12 1888 aa18.31■□□□□ 0.52
SMAD6-204ENST00000559931 FLIIQ13045 1269 aa18.3■□□□□ 0.52
SMAD6-204ENST00000559931 FKBP5Q13451 457 aaPredicted RBP18.3■□□□□ 0.52
SMAD6-204ENST00000559931 TTLL7Q6ZT98 887 aa18.3■□□□□ 0.52
SMAD6-204ENST00000559931 AMIGO3Q86WK7 504 aa18.3■□□□□ 0.52
SMAD6-204ENST00000559931 QSER1Q2KHR3 1735 aa18.29■□□□□ 0.52
SMAD6-204ENST00000559931 ANKRD13DQ6ZTN6 518 aa18.29■□□□□ 0.52
SMAD6-204ENST00000559931 RIC3Q7Z5B4 369 aa18.29■□□□□ 0.52
SMAD6-204ENST00000559931 COL23A1Q86Y22 540 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms