RNA–Protein interactions for RNA: ENST00000559880.5

SLTM-220, Transcript of SAFB like transcription modulator, humanhuman

TSL 3

Gene SLTM, Length 717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-220ENST00000559880 AMIGO3Q86WK7 504 aa14.04□□□□□ -0.16
SLTM-220ENST00000559880 RTF1Q92541 710 aaKnown RBP14.04□□□□□ -0.16
SLTM-220ENST00000559880 THUMPD2Q9BTF0 503 aaKnown RBP14.04□□□□□ -0.16
SLTM-220ENST00000559880 PNNQ9H307 717 aaKnown RBP14.04□□□□□ -0.16
SLTM-220ENST00000559880 MRS2Q9HD23 443 aa14.04□□□□□ -0.16
SLTM-220ENST00000559880 RRP7AQ9Y3A4 280 aaKnown RBP14.04□□□□□ -0.16
SLTM-220ENST00000559880 C4BP0C0L5 1744 aa14.04□□□□□ -0.16
SLTM-220ENST00000559880 KCNQ3O43525 872 aa14.03□□□□□ -0.16
SLTM-220ENST00000559880 TFCP2L1Q9NZI6 479 aa14.03□□□□□ -0.16
SLTM-220ENST00000559880 KCPQ6ZWJ8 1503 aa14.02□□□□□ -0.16
SLTM-220ENST00000559880 PNPLA7Q6ZV29 1317 aa14.02□□□□□ -0.17
SLTM-220ENST00000559880 ZBTB7AO95365 584 aa14.02□□□□□ -0.17
SLTM-220ENST00000559880 TMPOP42166 694 aaKnown RBP14.02□□□□□ -0.17
SLTM-220ENST00000559880 RIPK4P57078 832 aa14.02□□□□□ -0.17
SLTM-220ENST00000559880 NEUROD2Q15784 382 aa14.02□□□□□ -0.17
SLTM-220ENST00000559880 RASEFQ8IZ41 740 aa14.02□□□□□ -0.17
SLTM-220ENST00000559880 RUNDC1Q96C34 613 aa14.02□□□□□ -0.17
SLTM-220ENST00000559880 SENP3-EIF4A1A0A087X0R7 540 aa14.01□□□□□ -0.17
SLTM-220ENST00000559880 HTATSF1O43719 755 aaKnown RBP14.01□□□□□ -0.17
SLTM-220ENST00000559880 TJP1Q07157 1748 aa14.01□□□□□ -0.17
SLTM-220ENST00000559880 MYH14Q7Z406 1995 aaKnown RBP14□□□□□ -0.17
SLTM-220ENST00000559880 UBR3Q6ZT12 1888 aa14□□□□□ -0.17
SLTM-220ENST00000559880 ZNF790Q6PG37 636 aa14□□□□□ -0.17
SLTM-220ENST00000559880 DNAJC10Q8IXB1 793 aa14□□□□□ -0.17
SLTM-220ENST00000559880 PNISRQ8TF01 805 aaKnown RBP14□□□□□ -0.17
SLTM-220ENST00000559880 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
SLTM-220ENST00000559880 AK7Q96M32 723 aa14□□□□□ -0.17
SLTM-220ENST00000559880 MIS18AQ9NYP9 233 aa14□□□□□ -0.17
SLTM-220ENST00000559880 UBR2Q8IWV8 1755 aa14□□□□□ -0.17
SLTM-220ENST00000559880 COL5A3P25940 1745 aaPredicted RBP14□□□□□ -0.17
SLTM-220ENST00000559880 QSER1Q2KHR3 1735 aa14□□□□□ -0.17
SLTM-220ENST00000559880 ZNF831Q5JPB2 1677 aa14□□□□□ -0.17
SLTM-220ENST00000559880 BTBD11A6QL63 1104 aa13.99□□□□□ -0.17
SLTM-220ENST00000559880 PHF14O94880 888 aa13.99□□□□□ -0.17
SLTM-220ENST00000559880 COL23A1Q86Y22 540 aaPredicted RBP13.99□□□□□ -0.17
SLTM-220ENST00000559880 TTC5Q8N0Z6 440 aa13.99□□□□□ -0.17
SLTM-220ENST00000559880 APAF1O14727 1248 aa13.98□□□□□ -0.17
SLTM-220ENST00000559880 GNPATO15228 680 aa13.98□□□□□ -0.17
SLTM-220ENST00000559880 GALR2O43603 387 aaPredicted RBP13.98□□□□□ -0.17
SLTM-220ENST00000559880 FAM212AQ96EL1 285 aa13.98□□□□□ -0.17
SLTM-220ENST00000559880 CRKLP46109 303 aaKnown RBP13.97□□□□□ -0.17
SLTM-220ENST00000559880 TAF7Q15545 349 aaPredicted RBP13.97□□□□□ -0.17
SLTM-220ENST00000559880 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
SLTM-220ENST00000559880 LRP5O75197 1615 aa13.97□□□□□ -0.17
SLTM-220ENST00000559880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.96□□□□□ -0.17
SLTM-220ENST00000559880 PRAMEF22A3QJZ6 481 aa13.96□□□□□ -0.17
SLTM-220ENST00000559880 SPON1Q9HCB6 807 aa13.96□□□□□ -0.17
SLTM-220ENST00000559880 CICQ96RK0 1608 aaPredicted RBP13.96□□□□□ -0.17
SLTM-220ENST00000559880 HEG1Q9ULI3 1381 aa13.96□□□□□ -0.18
SLTM-220ENST00000559880 CNTNAP4Q9C0A0 1308 aa13.95□□□□□ -0.18
SLTM-220ENST00000559880 CYP19A1P11511 503 aaPredicted RBP13.95□□□□□ -0.18
SLTM-220ENST00000559880 RC3H1Q5TC82 1133 aaKnown RBP13.95□□□□□ -0.18
SLTM-220ENST00000559880 INTS5Q6P9B9 1019 aaKnown RBP13.95□□□□□ -0.18
SLTM-220ENST00000559880 SSFA2P28290 1259 aa13.94□□□□□ -0.18
SLTM-220ENST00000559880 PTGER2P43116 358 aa13.94□□□□□ -0.18
SLTM-220ENST00000559880 NUBP1P53384 320 aa13.94□□□□□ -0.18
SLTM-220ENST00000559880 MSL1Q68DK7 614 aa13.94□□□□□ -0.18
SLTM-220ENST00000559880 FAM9BQ8IZU0 186 aa13.94□□□□□ -0.18
SLTM-220ENST00000559880 VSIG10Q8N0Z9 540 aa13.94□□□□□ -0.18
SLTM-220ENST00000559880 FMNL2Q96PY5 1086 aa13.94□□□□□ -0.18
SLTM-220ENST00000559880 MTFR1LQ9H019 292 aa13.94□□□□□ -0.18
SLTM-220ENST00000559880 RTCBQ9Y3I0 505 aaKnown RBP13.94□□□□□ -0.18
SLTM-220ENST00000559880 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
SLTM-220ENST00000559880 RPS6KA4O75676 772 aa13.93□□□□□ -0.18
SLTM-220ENST00000559880 HMGB2P26583 209 aaKnown RBP13.93□□□□□ -0.18
SLTM-220ENST00000559880 LMOD3Q0VAK6 560 aa13.93□□□□□ -0.18
SLTM-220ENST00000559880 SGIP1Q9BQI5 828 aa13.93□□□□□ -0.18
SLTM-220ENST00000559880 CCDC87Q9NVE4 849 aa13.93□□□□□ -0.18
SLTM-220ENST00000559880 ZBTB1Q9Y2K1 713 aa13.93□□□□□ -0.18
SLTM-220ENST00000559880 DCAF8Q5TAQ9 597 aa13.92□□□□□ -0.18
SLTM-220ENST00000559880 DIEXFQ68CQ4 756 aaKnown RBP13.92□□□□□ -0.18
SLTM-220ENST00000559880 FLAD1Q8NFF5 587 aa13.92□□□□□ -0.18
SLTM-220ENST00000559880 SLC16A10Q8TF71 515 aa13.92□□□□□ -0.18
SLTM-220ENST00000559880 ARHGEF1Q92888 912 aaKnown RBP13.92□□□□□ -0.18
SLTM-220ENST00000559880 USP16Q9Y5T5 823 aa13.92□□□□□ -0.18
SLTM-220ENST00000559880 EIF4A1P60842 406 aaKnown RBP13.91□□□□□ -0.18
SLTM-220ENST00000559880 TRAPPC3LQ5T215 181 aa13.91□□□□□ -0.18
SLTM-220ENST00000559880 TSPYL4Q9UJ04 414 aa13.91□□□□□ -0.18
SLTM-220ENST00000559880 LAS1LQ9Y4W2 734 aaKnown RBP13.91□□□□□ -0.18
SLTM-220ENST00000559880 A1BGP04217 495 aa13.9□□□□□ -0.18
SLTM-220ENST00000559880 CANXP27824 592 aaKnown RBP13.9□□□□□ -0.18
SLTM-220ENST00000559880 PIP4K2AP48426 406 aaPredicted RBP13.9□□□□□ -0.18
SLTM-220ENST00000559880 C4AP0C0L4 1744 aa13.9□□□□□ -0.18
SLTM-220ENST00000559880 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
SLTM-220ENST00000559880 SOS1Q07889 1333 aaPredicted RBP13.9□□□□□ -0.19
SLTM-220ENST00000559880 STARD3NLO95772 234 aa13.89□□□□□ -0.19
SLTM-220ENST00000559880 SNRPA1P09661 255 aaKnown RBP13.89□□□□□ -0.19
SLTM-220ENST00000559880 MS4A3Q96HJ5 214 aa13.89□□□□□ -0.19
SLTM-220ENST00000559880 PPP1R1BQ9UD71 204 aaPredicted RBP13.89□□□□□ -0.19
SLTM-220ENST00000559880 SRP68Q9UHB9 627 aaKnown RBP13.89□□□□□ -0.19
SLTM-220ENST00000559880 SALL2Q9Y467 1007 aaPredicted RBP13.89□□□□□ -0.19
SLTM-220ENST00000559880 CHL1O00533 1208 aa13.88□□□□□ -0.19
SLTM-220ENST00000559880 GIGYF1O75420 1035 aaPredicted RBP13.88□□□□□ -0.19
SLTM-220ENST00000559880 RFC4P35249 363 aa13.88□□□□□ -0.19
SLTM-220ENST00000559880 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
SLTM-220ENST00000559880 TEX13AQ9BXU3 409 aaPredicted RBP13.88□□□□□ -0.19
SLTM-220ENST00000559880 COL15A1P39059 1388 aa13.87□□□□□ -0.19
SLTM-220ENST00000559880 KIF12Q96FN5 646 aa13.87□□□□□ -0.19
SLTM-220ENST00000559880 ZNF330Q9Y3S2 320 aaPredicted RBP13.87□□□□□ -0.19
SLTM-220ENST00000559880 GYS1P13807 737 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms