RNA–Protein interactions for RNA: ENST00000559670.5

LRRC49-218, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-218ENST00000559670 HS6ST3Q8IZP7 471 aa10.6□□□□□ -0.71
LRRC49-218ENST00000559670 SPRYD3Q8NCJ5 442 aa10.6□□□□□ -0.71
LRRC49-218ENST00000559670 A0A0G2JLW4 131 aa10.59□□□□□ -0.71
LRRC49-218ENST00000559670 CCDC85CA6NKD9 419 aa10.59□□□□□ -0.71
LRRC49-218ENST00000559670 LBX1P52954 281 aa10.59□□□□□ -0.71
LRRC49-218ENST00000559670 AK7Q96M32 723 aa10.59□□□□□ -0.71
LRRC49-218ENST00000559670 PDE4DIPQ5VU43 2346 aa10.59□□□□□ -0.71
LRRC49-218ENST00000559670 SBF1O95248 1867 aa10.58□□□□□ -0.72
LRRC49-218ENST00000559670 PHF14O94880 888 aa10.58□□□□□ -0.72
LRRC49-218ENST00000559670 VEGFAP15692 232 aaPredicted RBP10.58□□□□□ -0.72
LRRC49-218ENST00000559670 CABP1Q9NZU7 370 aa10.58□□□□□ -0.72
LRRC49-218ENST00000559670 TTC21BQ7Z4L5 1316 aa10.58□□□□□ -0.72
LRRC49-218ENST00000559670 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.72
LRRC49-218ENST00000559670 LTN1O94822 1766 aa10.57□□□□□ -0.72
LRRC49-218ENST00000559670 CNTNAP1P78357 1384 aa10.57□□□□□ -0.72
LRRC49-218ENST00000559670 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.57□□□□□ -0.72
LRRC49-218ENST00000559670 SSFA2P28290 1259 aa10.57□□□□□ -0.72
LRRC49-218ENST00000559670 TMEM92Q6UXU6 159 aa10.57□□□□□ -0.72
LRRC49-218ENST00000559670 AMIGO3Q86WK7 504 aa10.57□□□□□ -0.72
LRRC49-218ENST00000559670 ANKRD24Q8TF21 1146 aa10.57□□□□□ -0.72
LRRC49-218ENST00000559670 KDM2AQ9Y2K7 1162 aa10.57□□□□□ -0.72
LRRC49-218ENST00000559670 TTC21AQ8NDW8 1320 aa10.57□□□□□ -0.72
LRRC49-218ENST00000559670 FAM208AQ9UK61 1670 aaKnown RBP10.57□□□□□ -0.72
LRRC49-218ENST00000559670 POTEB3A0JP26 581 aa10.56□□□□□ -0.72
LRRC49-218ENST00000559670 MMP10P09238 476 aa10.56□□□□□ -0.72
LRRC49-218ENST00000559670 DPEP1P16444 411 aa10.56□□□□□ -0.72
LRRC49-218ENST00000559670 POTEBQ6S5H4 581 aa10.56□□□□□ -0.72
LRRC49-218ENST00000559670 SMIM5Q71RC9 77 aa10.56□□□□□ -0.72
LRRC49-218ENST00000559670 PALLDQ8WX93 1383 aa10.55□□□□□ -0.72
LRRC49-218ENST00000559670 DCAF11Q8TEB1 546 aa10.55□□□□□ -0.72
LRRC49-218ENST00000559670 STAC3Q96MF2 364 aa10.55□□□□□ -0.72
LRRC49-218ENST00000559670 HS3ST6Q96QI5 342 aa10.55□□□□□ -0.72
LRRC49-218ENST00000559670 WBP1LQ9NX94 342 aa10.55□□□□□ -0.72
LRRC49-218ENST00000559670 VIRMAQ69YN4 1812 aaKnown RBP10.54□□□□□ -0.72
LRRC49-218ENST00000559670 HSPA8P11142 646 aaKnown RBP10.54□□□□□ -0.72
LRRC49-218ENST00000559670 FBXO22Q8NEZ5 403 aa10.54□□□□□ -0.72
LRRC49-218ENST00000559670 DCAF5Q96JK2 942 aa10.54□□□□□ -0.72
LRRC49-218ENST00000559670 STK24Q9Y6E0 443 aa10.54□□□□□ -0.72
LRRC49-218ENST00000559670 FAM205CA6NFA0 338 aa10.53□□□□□ -0.72
LRRC49-218ENST00000559670 GLTPD2A6NH11 291 aa10.53□□□□□ -0.72
LRRC49-218ENST00000559670 DOK7Q18PE1 504 aa10.53□□□□□ -0.72
LRRC49-218ENST00000559670 VSIG10Q8N0Z9 540 aa10.53□□□□□ -0.72
LRRC49-218ENST00000559670 ZCRB1Q8TBF4 217 aaKnown RBP10.53□□□□□ -0.72
LRRC49-218ENST00000559670 CCDC87Q9NVE4 849 aa10.53□□□□□ -0.72
LRRC49-218ENST00000559670 PIM2Q9P1W9 311 aa10.53□□□□□ -0.72
LRRC49-218ENST00000559670 TNRC18O15417 2968 aaPredicted RBP10.52□□□□□ -0.73
LRRC49-218ENST00000559670 C4AP0C0L4 1744 aa10.52□□□□□ -0.73
LRRC49-218ENST00000559670 KDM6AO15550 1401 aaPredicted RBP10.51□□□□□ -0.73
LRRC49-218ENST00000559670 TIAM2Q8IVF5 1701 aa10.51□□□□□ -0.73
LRRC49-218ENST00000559670 STK25O00506 426 aa10.51□□□□□ -0.73
LRRC49-218ENST00000559670 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
LRRC49-218ENST00000559670 KCNA3P22001 575 aa10.51□□□□□ -0.73
LRRC49-218ENST00000559670 VEGFBP49765 207 aa10.51□□□□□ -0.73
LRRC49-218ENST00000559670 DALRD3Q5D0E6 543 aaKnown RBP10.51□□□□□ -0.73
LRRC49-218ENST00000559670 ZNF710Q8N1W2 664 aa10.51□□□□□ -0.73
LRRC49-218ENST00000559670 MFRPQ9BY79 579 aa10.51□□□□□ -0.73
LRRC49-218ENST00000559670 SPNS2Q8IVW8 549 aa10.5□□□□□ -0.73
LRRC49-218ENST00000559670 SMARCC1Q92922 1105 aaPredicted RBP10.5□□□□□ -0.73
LRRC49-218ENST00000559670 CENPJQ9HC77 1338 aaPredicted RBP10.5□□□□□ -0.73
LRRC49-218ENST00000559670 NLGN1Q8N2Q7 840 aa10.49□□□□□ -0.73
LRRC49-218ENST00000559670 KRTAP3-3Q9BYR6 98 aa10.49□□□□□ -0.73
LRRC49-218ENST00000559670 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
LRRC49-218ENST00000559670 USP31Q70CQ4 1352 aa10.49□□□□□ -0.73
LRRC49-218ENST00000559670 MEGF6O75095 1541 aa10.48□□□□□ -0.73
LRRC49-218ENST00000559670 GNPATO15228 680 aa10.48□□□□□ -0.73
LRRC49-218ENST00000559670 LMNB1P20700 586 aa10.48□□□□□ -0.73
LRRC49-218ENST00000559670 PPARGC1BQ86YN6 1023 aaKnown RBP10.48□□□□□ -0.73
LRRC49-218ENST00000559670 MAP2P11137 1827 aaKnown RBP10.47□□□□□ -0.73
LRRC49-218ENST00000559670 POTECB2RU33 542 aa10.47□□□□□ -0.73
LRRC49-218ENST00000559670 TMF1P82094 1093 aa10.47□□□□□ -0.73
LRRC49-218ENST00000559670 MAP2K1Q02750 393 aaPredicted RBP10.47□□□□□ -0.73
LRRC49-218ENST00000559670 RASSF7Q02833 373 aa10.47□□□□□ -0.73
LRRC49-218ENST00000559670 MMRN1Q13201 1228 aa10.47□□□□□ -0.73
LRRC49-218ENST00000559670 NKX1-1Q15270 411 aaPredicted RBP10.47□□□□□ -0.73
LRRC49-218ENST00000559670 MPRIPQ6WCQ1 1025 aa10.47□□□□□ -0.73
LRRC49-218ENST00000559670 LINC00116Q8NCU8 138 aa10.47□□□□□ -0.73
LRRC49-218ENST00000559670 PARP3Q9Y6F1 533 aa10.47□□□□□ -0.73
LRRC49-218ENST00000559670 KTN1Q86UP2 1357 aaKnown RBP10.47□□□□□ -0.73
LRRC49-218ENST00000559670 MON2Q7Z3U7 1717 aa10.47□□□□□ -0.73
LRRC49-218ENST00000559670 PRPF38BQ5VTL8 546 aaKnown RBP10.46□□□□□ -0.73
LRRC49-218ENST00000559670 LTV1Q96GA3 475 aaPredicted RBP10.46□□□□□ -0.73
LRRC49-218ENST00000559670 ITGB4P16144 1822 aa10.46□□□□□ -0.74
LRRC49-218ENST00000559670 CCDC88AQ3V6T2 1871 aa10.45□□□□□ -0.74
LRRC49-218ENST00000559670 RGPD2P0DJD1 1756 aa10.45□□□□□ -0.74
LRRC49-218ENST00000559670 CGNL1Q0VF96 1302 aa10.45□□□□□ -0.74
LRRC49-218ENST00000559670 PASKQ96RG2 1323 aa10.45□□□□□ -0.74
LRRC49-218ENST00000559670 TMEM88BA6NKF7 163 aa10.45□□□□□ -0.74
LRRC49-218ENST00000559670 RIMBP2O15034 1052 aa10.45□□□□□ -0.74
LRRC49-218ENST00000559670 IP6K1Q92551 441 aa10.45□□□□□ -0.74
LRRC49-218ENST00000559670 TSHZ2Q9NRE2 1034 aa10.45□□□□□ -0.74
LRRC49-218ENST00000559670 EVC2Q86UK5 1308 aa10.44□□□□□ -0.74
LRRC49-218ENST00000559670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.44□□□□□ -0.74
LRRC49-218ENST00000559670 LOC102724428A0A0B4J2F2 783 aa10.43□□□□□ -0.74
LRRC49-218ENST00000559670 SIK1P57059 783 aa10.43□□□□□ -0.74
LRRC49-218ENST00000559670 TRAPPC3LQ5T215 181 aa10.43□□□□□ -0.74
LRRC49-218ENST00000559670 MCOLN1Q9GZU1 580 aa10.43□□□□□ -0.74
LRRC49-218ENST00000559670 PCDH11XQ9BZA7 1347 aa10.42□□□□□ -0.74
LRRC49-218ENST00000559670 PCDH11YQ9BZA8 1340 aa10.42□□□□□ -0.74
LRRC49-218ENST00000559670 RASSF10A6NK89 507 aa10.42□□□□□ -0.74
LRRC49-218ENST00000559670 GTPBP6O43824 516 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms