RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 DHX9Q08211 1270 aaKnown RBP9.72□□□□□ -0.85
CRNDE-207ENST00000559598 EMILIN1Q9Y6C2 1016 aa9.72□□□□□ -0.85
CRNDE-207ENST00000559598 SPAG9O60271 1321 aaKnown RBP9.72□□□□□ -0.85
CRNDE-207ENST00000559598 KIAA1107Q9UPP5 1409 aa9.72□□□□□ -0.85
CRNDE-207ENST00000559598 DEPDC5O75140 1603 aa9.71□□□□□ -0.85
CRNDE-207ENST00000559598 GIGYF1O75420 1035 aaPredicted RBP9.71□□□□□ -0.86
CRNDE-207ENST00000559598 BMP1P13497 986 aa9.71□□□□□ -0.86
CRNDE-207ENST00000559598 PIP4K2BP78356 416 aa9.71□□□□□ -0.86
CRNDE-207ENST00000559598 INSM1Q01101 510 aaPredicted RBP9.71□□□□□ -0.86
CRNDE-207ENST00000559598 PPP1R26Q5T8A7 1209 aaPredicted RBP9.71□□□□□ -0.86
CRNDE-207ENST00000559598 TRIM46Q7Z4K8 759 aa9.71□□□□□ -0.86
CRNDE-207ENST00000559598 SEPT12Q8IYM1 358 aa9.71□□□□□ -0.86
CRNDE-207ENST00000559598 SLC16A10Q8TF71 515 aa9.71□□□□□ -0.86
CRNDE-207ENST00000559598 ITPKCQ96DU7 683 aa9.71□□□□□ -0.86
CRNDE-207ENST00000559598 CASKIN1Q8WXD9 1431 aa9.71□□□□□ -0.86
CRNDE-207ENST00000559598 VWDEQ8N2E2 1590 aa9.71□□□□□ -0.86
CRNDE-207ENST00000559598 ZIC2O95409 532 aaPredicted RBP9.7□□□□□ -0.86
CRNDE-207ENST00000559598 RAB15P59190 212 aa9.7□□□□□ -0.86
CRNDE-207ENST00000559598 A6NJR5 290 aa9.69□□□□□ -0.86
CRNDE-207ENST00000559598 MED14O60244 1454 aa9.69□□□□□ -0.86
CRNDE-207ENST00000559598 SOX11P35716 441 aa9.69□□□□□ -0.86
CRNDE-207ENST00000559598 IQGAP1P46940 1657 aa9.69□□□□□ -0.86
CRNDE-207ENST00000559598 PROSER2Q86WR7 435 aaPredicted RBP9.69□□□□□ -0.86
CRNDE-207ENST00000559598 NPAS3Q8IXF0 933 aa9.69□□□□□ -0.86
CRNDE-207ENST00000559598 FYCO1Q9BQS8 1478 aa9.69□□□□□ -0.86
CRNDE-207ENST00000559598 ZFAND3Q9H8U3 227 aa9.69□□□□□ -0.86
CRNDE-207ENST00000559598 PGPEP1Q9NXJ5 209 aa9.69□□□□□ -0.86
CRNDE-207ENST00000559598 CEP126Q9P2H0 1117 aa9.69□□□□□ -0.86
CRNDE-207ENST00000559598 ALKQ9UM73 1620 aa9.69□□□□□ -0.86
CRNDE-207ENST00000559598 ERVH48-1M5A8F1 160 aa9.68□□□□□ -0.86
CRNDE-207ENST00000559598 RNF20Q5VTR2 975 aa9.68□□□□□ -0.86
CRNDE-207ENST00000559598 FNBP4Q8N3X1 1017 aaPredicted RBP9.68□□□□□ -0.86
CRNDE-207ENST00000559598 NXF1Q9UBU9 619 aaKnown RBP9.68□□□□□ -0.86
CRNDE-207ENST00000559598 KDM5DQ9BY66 1539 aa9.67□□□□□ -0.86
CRNDE-207ENST00000559598 GPATCH8Q9UKJ3 1502 aaKnown RBP9.67□□□□□ -0.86
CRNDE-207ENST00000559598 PZPP20742 1482 aa9.67□□□□□ -0.86
CRNDE-207ENST00000559598 NLRP1Q9C000 1473 aa9.67□□□□□ -0.86
CRNDE-207ENST00000559598 TNRQ92752 1358 aa9.67□□□□□ -0.86
CRNDE-207ENST00000559598 SEMA3FQ13275 785 aa9.67□□□□□ -0.86
CRNDE-207ENST00000559598 SCARF1Q14162 830 aa9.67□□□□□ -0.86
CRNDE-207ENST00000559598 MRPL14Q6P1L8 145 aaKnown RBP9.66□□□□□ -0.86
CRNDE-207ENST00000559598 GGT6Q6P531 493 aa9.66□□□□□ -0.86
CRNDE-207ENST00000559598 CCDC125Q86Z20 511 aa9.66□□□□□ -0.86
CRNDE-207ENST00000559598 TMPRSS4Q9NRS4 437 aa9.66□□□□□ -0.86
CRNDE-207ENST00000559598 STK17AQ9UEE5 414 aa9.66□□□□□ -0.86
CRNDE-207ENST00000559598 RTEL1-TNFRSF6BF6WH68 1400 aa9.65□□□□□ -0.86
CRNDE-207ENST00000559598 POM121CA8CG34 1229 aa9.65□□□□□ -0.86
CRNDE-207ENST00000559598 ANKLE2Q86XL3 938 aa9.65□□□□□ -0.86
CRNDE-207ENST00000559598 ZNF784Q8NCA9 323 aaPredicted RBP9.65□□□□□ -0.86
CRNDE-207ENST00000559598 ZFP42Q96MM3 310 aa9.65□□□□□ -0.86
CRNDE-207ENST00000559598 ZNF777Q9ULD5 760 aaPredicted RBP9.65□□□□□ -0.86
CRNDE-207ENST00000559598 UGGT1Q9NYU2 1555 aa9.65□□□□□ -0.86
CRNDE-207ENST00000559598 NPHP4O75161 1426 aaPredicted RBP9.65□□□□□ -0.87
CRNDE-207ENST00000559598 ALG2Q9H553 416 aa9.64□□□□□ -0.87
CRNDE-207ENST00000559598 STRCP1A6NGW2 1772 aa9.63□□□□□ -0.87
CRNDE-207ENST00000559598 SLFNL1Q499Z3 407 aa9.63□□□□□ -0.87
CRNDE-207ENST00000559598 THEMISQ8N1K5 641 aaPredicted RBP9.63□□□□□ -0.87
CRNDE-207ENST00000559598 TRIM52Q96A61 297 aa9.63□□□□□ -0.87
CRNDE-207ENST00000559598 ZC3H13Q5T200 1668 aaKnown RBP9.63□□□□□ -0.87
CRNDE-207ENST00000559598 CCNB3Q8WWL7 1395 aa9.63□□□□□ -0.87
CRNDE-207ENST00000559598 LRRC7Q96NW7 1537 aa9.62□□□□□ -0.87
CRNDE-207ENST00000559598 HNRNPMP52272 730 aaKnown RBP eCLIP9.62□□□□□ -0.87
CRNDE-207ENST00000559598 CBLBQ13191 982 aa9.62□□□□□ -0.87
CRNDE-207ENST00000559598 Q6ZVU0 165 aa9.62□□□□□ -0.87
CRNDE-207ENST00000559598 PHTF2Q8N3S3 785 aa9.62□□□□□ -0.87
CRNDE-207ENST00000559598 MEIOBQ8N635 442 aa9.62□□□□□ -0.87
CRNDE-207ENST00000559598 IRF7Q92985 503 aa9.62□□□□□ -0.87
CRNDE-207ENST00000559598 CFDP1Q9UEE9 299 aaPredicted RBP9.62□□□□□ -0.87
CRNDE-207ENST00000559598 DHX29Q7Z478 1369 aaKnown RBP9.62□□□□□ -0.87
CRNDE-207ENST00000559598 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.62□□□□□ -0.87
CRNDE-207ENST00000559598 LILRA1O75019 489 aa9.61□□□□□ -0.87
CRNDE-207ENST00000559598 RNF135Q8IUD6 432 aa9.61□□□□□ -0.87
CRNDE-207ENST00000559598 PCDHB11Q9Y5F2 797 aa9.61□□□□□ -0.87
CRNDE-207ENST00000559598 MIA2Q96PC5 1412 aa9.6□□□□□ -0.87
CRNDE-207ENST00000559598 ADAMTS19Q8TE59 1207 aa9.6□□□□□ -0.87
CRNDE-207ENST00000559598 CCDC85AQ96PX6 553 aaPredicted RBP9.6□□□□□ -0.87
CRNDE-207ENST00000559598 PURBQ96QR8 312 aaKnown RBP9.6□□□□□ -0.87
CRNDE-207ENST00000559598 CYLDQ9NQC7 956 aa9.6□□□□□ -0.87
CRNDE-207ENST00000559598 TIAM1Q13009 1591 aa9.59□□□□□ -0.87
CRNDE-207ENST00000559598 TRAK2O60296 914 aa9.59□□□□□ -0.87
CRNDE-207ENST00000559598 LCE2CQ5TA81 110 aa9.59□□□□□ -0.87
CRNDE-207ENST00000559598 HDGFL1Q5TGJ6 251 aa9.59□□□□□ -0.87
CRNDE-207ENST00000559598 MBD5Q9P267 1494 aa9.59□□□□□ -0.87
CRNDE-207ENST00000559598 XIRP1Q702N8 1843 aaKnown RBP9.59□□□□□ -0.88
CRNDE-207ENST00000559598 H3BM21 787 aa9.58□□□□□ -0.88
CRNDE-207ENST00000559598 UPP2O95045 317 aa9.58□□□□□ -0.88
CRNDE-207ENST00000559598 ADD1P35611 737 aaKnown RBP9.58□□□□□ -0.88
CRNDE-207ENST00000559598 ERVK-9P63128 1117 aa9.58□□□□□ -0.88
CRNDE-207ENST00000559598 TSGA10IPQ3SY00 556 aa9.58□□□□□ -0.88
CRNDE-207ENST00000559598 CC2D2BQ6DHV5 1058 aa9.58□□□□□ -0.88
CRNDE-207ENST00000559598 LINC00528Q8N1L1 170 aa9.58□□□□□ -0.88
CRNDE-207ENST00000559598 TSEN34Q9BSV6 310 aaKnown RBP9.58□□□□□ -0.88
CRNDE-207ENST00000559598 ZMYND15Q9H091 742 aa9.58□□□□□ -0.88
CRNDE-207ENST00000559598 CCDC141Q6ZP82 1450 aa9.58□□□□□ -0.88
CRNDE-207ENST00000559598 WASHC2CQ9Y4E1 1318 aa9.57□□□□□ -0.88
CRNDE-207ENST00000559598 EHBP1L1Q8N3D4 1523 aa9.57□□□□□ -0.88
CRNDE-207ENST00000559598 UBR1Q8IWV7 1749 aa9.57□□□□□ -0.88
CRNDE-207ENST00000559598 FAM181BA6NEQ2 426 aa9.57□□□□□ -0.88
CRNDE-207ENST00000559598 PIK3CDO00329 1044 aa9.57□□□□□ -0.88
CRNDE-207ENST00000559598 GLMNQ92990 594 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms