RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 HNRNPMP52272 730 aaKnown RBP eCLIP10.15□□□□□ -0.787e-6■■■■□ 22.9
ZEB1-216ENST00000559496 POLMQ9NP87 494 aaPredicted RBP10.15□□□□□ -0.78
ZEB1-216ENST00000559496 CEP126Q9P2H0 1117 aa10.15□□□□□ -0.78
ZEB1-216ENST00000559496 ADGBQ8N7X0 1667 aa10.15□□□□□ -0.78
ZEB1-216ENST00000559496 ABCC1P33527 1531 aa10.15□□□□□ -0.78
ZEB1-216ENST00000559496 FANCAO15360 1455 aa10.15□□□□□ -0.78
ZEB1-216ENST00000559496 CCDC141Q6ZP82 1450 aa10.15□□□□□ -0.78
ZEB1-216ENST00000559496 SHANK2Q9UPX8 1470 aa10.15□□□□□ -0.78
ZEB1-216ENST00000559496 NAIPQ13075 1403 aa10.15□□□□□ -0.79
ZEB1-216ENST00000559496 CD109Q6YHK3 1445 aa10.15□□□□□ -0.79
ZEB1-216ENST00000559496 ERVK-9P63128 1117 aa10.14□□□□□ -0.79
ZEB1-216ENST00000559496 IRF5Q13568 498 aa10.14□□□□□ -0.79
ZEB1-216ENST00000559496 CC2D2BQ6DHV5 1058 aa10.14□□□□□ -0.79
ZEB1-216ENST00000559496 RNF217Q8TC41 542 aa10.14□□□□□ -0.79
ZEB1-216ENST00000559496 RRP7BPQ9NSQ0 103 aa10.14□□□□□ -0.79
ZEB1-216ENST00000559496 GCC2Q8IWJ2 1684 aa10.14□□□□□ -0.79
ZEB1-216ENST00000559496 C9orf84Q5VXU9 1444 aa10.14□□□□□ -0.79
ZEB1-216ENST00000559496 ATP5J2-PTCD1G3V325 749 aa10.14□□□□□ -0.79
ZEB1-216ENST00000559496 EIF4G2P78344 907 aaKnown RBP eCLIP10.14□□□□□ -0.79
ZEB1-216ENST00000559496 GLI2P10070 1586 aa10.13□□□□□ -0.79
ZEB1-216ENST00000559496 ADGRL2O95490 1459 aa10.13□□□□□ -0.79
ZEB1-216ENST00000559496 CFAP74Q9C0B2 1584 aa10.13□□□□□ -0.79
ZEB1-216ENST00000559496 DIP2BQ9P265 1576 aa10.13□□□□□ -0.79
ZEB1-216ENST00000559496 TSPY4P0CV99 314 aa10.13□□□□□ -0.79
ZEB1-216ENST00000559496 TSPY10P0CW01 314 aa10.13□□□□□ -0.79
ZEB1-216ENST00000559496 FOXD4L5Q5VV16 416 aaPredicted RBP10.13□□□□□ -0.79
ZEB1-216ENST00000559496 ZSCAN1Q8NBB4 408 aa10.13□□□□□ -0.79
ZEB1-216ENST00000559496 GDPD2Q9HCC8 539 aa10.13□□□□□ -0.79
ZEB1-216ENST00000559496 PCDHB11Q9Y5F2 797 aa10.13□□□□□ -0.79
ZEB1-216ENST00000559496 ANKRD30AQ9BXX3 1397 aa10.12□□□□□ -0.79
ZEB1-216ENST00000559496 ARHGEF12Q9NZN5 1544 aa10.12□□□□□ -0.79
ZEB1-216ENST00000559496 SLC35F4A4IF30 521 aa10.12□□□□□ -0.79
ZEB1-216ENST00000559496 MCM6Q14566 821 aa10.12□□□□□ -0.79
ZEB1-216ENST00000559496 NCOA1Q15788 1441 aa10.11□□□□□ -0.79
ZEB1-216ENST00000559496 MAP3K4Q9Y6R4 1608 aa10.11□□□□□ -0.79
ZEB1-216ENST00000559496 ADGRL1O94910 1474 aa10.11□□□□□ -0.79
ZEB1-216ENST00000559496 FAM69CQ0P6D2 419 aa10.11□□□□□ -0.79
ZEB1-216ENST00000559496 CCDC155Q8N6L0 562 aa10.11□□□□□ -0.79
ZEB1-216ENST00000559496 ESF1Q9H501 851 aaKnown RBP10.11□□□□□ -0.79
ZEB1-216ENST00000559496 GTF3C3Q9Y5Q9 886 aa10.11□□□□□ -0.79
ZEB1-216ENST00000559496 MAST1Q9Y2H9 1570 aa10.1□□□□□ -0.79
ZEB1-216ENST00000559496 DHX57Q6P158 1386 aaKnown RBP10.1□□□□□ -0.79
ZEB1-216ENST00000559496 ABL2P42684 1182 aa10.1□□□□□ -0.79
ZEB1-216ENST00000559496 RNF144AP50876 292 aaPredicted RBP10.1□□□□□ -0.79
ZEB1-216ENST00000559496 WASHC4Q2M389 1173 aa10.1□□□□□ -0.79
ZEB1-216ENST00000559496 NANOS1Q8WY41 292 aaKnown RBP10.1□□□□□ -0.79
ZEB1-216ENST00000559496 TRAPPC8Q9Y2L5 1435 aa10.1□□□□□ -0.79
ZEB1-216ENST00000559496 SCTRP47872 440 aa10.09□□□□□ -0.79
ZEB1-216ENST00000559496 ANP32EQ9BTT0 268 aa10.09□□□□□ -0.79
ZEB1-216ENST00000559496 SCAPERQ9BY12 1400 aa10.09□□□□□ -0.79
ZEB1-216ENST00000559496 NEO1Q92859 1461 aa10.08□□□□□ -0.8
ZEB1-216ENST00000559496 A0A1W2PRU2 124 aa10.08□□□□□ -0.8
ZEB1-216ENST00000559496 VAC14Q08AM6 782 aa10.08□□□□□ -0.8
ZEB1-216ENST00000559496 NEUROD1Q13562 356 aa10.08□□□□□ -0.8
ZEB1-216ENST00000559496 CYP2U1Q7Z449 544 aa10.08□□□□□ -0.8
ZEB1-216ENST00000559496 KIF15Q9NS87 1388 aa10.08□□□□□ -0.8
ZEB1-216ENST00000559496 KDM6BO15054 1643 aa10.08□□□□□ -0.8
ZEB1-216ENST00000559496 SENP3-EIF4A1A0A087X0R7 540 aa10.07□□□□□ -0.8
ZEB1-216ENST00000559496 TRAK2O60296 914 aa10.07□□□□□ -0.8
ZEB1-216ENST00000559496 GPC1P35052 558 aa10.07□□□□□ -0.8
ZEB1-216ENST00000559496 LYSMD3Q7Z3D4 306 aa10.07□□□□□ -0.8
ZEB1-216ENST00000559496 PHTF2Q8N3S3 785 aa10.07□□□□□ -0.8
ZEB1-216ENST00000559496 GPR161Q8N6U8 529 aaKnown RBP10.07□□□□□ -0.8
ZEB1-216ENST00000559496 OSBPL3Q9H4L5 887 aa10.07□□□□□ -0.8
ZEB1-216ENST00000559496 PLXNC1O60486 1568 aa10.07□□□□□ -0.8
ZEB1-216ENST00000559496 SPAG9O60271 1321 aaKnown RBP10.06□□□□□ -0.8
ZEB1-216ENST00000559496 FAM181BA6NEQ2 426 aa10.06□□□□□ -0.8
ZEB1-216ENST00000559496 MEN1O00255 615 aa10.06□□□□□ -0.8
ZEB1-216ENST00000559496 CCDC85AQ96PX6 553 aaPredicted RBP10.06□□□□□ -0.8
ZEB1-216ENST00000559496 ANKRD50Q9ULJ7 1429 aa10.06□□□□□ -0.8
ZEB1-216ENST00000559496 KIF13AQ9H1H9 1805 aa10.05□□□□□ -0.8
ZEB1-216ENST00000559496 ITGA6P23229 1130 aa10.05□□□□□ -0.8
ZEB1-216ENST00000559496 KRT76Q01546 638 aa10.05□□□□□ -0.8
ZEB1-216ENST00000559496 SLFNL1Q499Z3 407 aa10.05□□□□□ -0.8
ZEB1-216ENST00000559496 AFAP1Q8N556 730 aa10.05□□□□□ -0.8
ZEB1-216ENST00000559496 NLRP3Q96P20 1036 aa10.05□□□□□ -0.8
ZEB1-216ENST00000559496 ZNF518AQ6AHZ1 1483 aa10.05□□□□□ -0.8
ZEB1-216ENST00000559496 TSPOAP1O95153 1857 aa10.05□□□□□ -0.8
ZEB1-216ENST00000559496 ZFYVE16Q7Z3T8 1539 aa10.05□□□□□ -0.8
ZEB1-216ENST00000559496 RTEL1-TNFRSF6BF6WH68 1400 aa10.05□□□□□ -0.8
ZEB1-216ENST00000559496 POGZQ7Z3K3 1410 aa10.05□□□□□ -0.8
ZEB1-216ENST00000559496 CLSPNQ9HAW4 1339 aa10.05□□□□□ -0.8
ZEB1-216ENST00000559496 TEX14Q8IWB6 1497 aa10.04□□□□□ -0.8
ZEB1-216ENST00000559496 MYCP01106 439 aaPredicted RBP10.04□□□□□ -0.8
ZEB1-216ENST00000559496 PRICKLE2Q7Z3G6 844 aa10.04□□□□□ -0.8
ZEB1-216ENST00000559496 CDCA7Q9BWT1 371 aaPredicted RBP10.04□□□□□ -0.8
ZEB1-216ENST00000559496 COG6Q9Y2V7 657 aa10.04□□□□□ -0.8
ZEB1-216ENST00000559496 PPRC1Q5VV67 1664 aaKnown RBP10.04□□□□□ -0.8
ZEB1-216ENST00000559496 INO80Q9ULG1 1556 aaPredicted RBP10.04□□□□□ -0.8
ZEB1-216ENST00000559496 DENND4BO75064 1496 aaPredicted RBP10.04□□□□□ -0.8
ZEB1-216ENST00000559496 GNRH1P01148 92 aa10.03□□□□□ -0.8
ZEB1-216ENST00000559496 CLN3Q13286 438 aa10.03□□□□□ -0.8
ZEB1-216ENST00000559496 ATP7AQ04656 1500 aa10.03□□□□□ -0.8
ZEB1-216ENST00000559496 DUOX2Q9NRD8 1548 aa10.02□□□□□ -0.8
ZEB1-216ENST00000559496 SOX11P35716 441 aa10.02□□□□□ -0.8
ZEB1-216ENST00000559496 USP4Q13107 963 aa10.02□□□□□ -0.8
ZEB1-216ENST00000559496 SEMA3FQ13275 785 aa10.02□□□□□ -0.8
ZEB1-216ENST00000559496 TSGA10IPQ3SY00 556 aa10.02□□□□□ -0.8
ZEB1-216ENST00000559496 RNF135Q8IUD6 432 aa10.02□□□□□ -0.8
ZEB1-216ENST00000559496 KDM5CP41229 1560 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms