RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 NFATC2IPQ8NCF5 419 aa22.5■■□□□ 1.19
PSEN1-224ENST00000559361 RRAGCQ9HB90 399 aa22.5■■□□□ 1.19
PSEN1-224ENST00000559361 TJP1Q07157 1748 aa22.5■■□□□ 1.19
PSEN1-224ENST00000559361 POLRMTO00411 1230 aaKnown RBP22.49■■□□□ 1.19
PSEN1-224ENST00000559361 CHRNA5P30532 468 aa22.49■■□□□ 1.19
PSEN1-224ENST00000559361 MTHFSP49914 203 aa22.49■■□□□ 1.19
PSEN1-224ENST00000559361 INTS5Q6P9B9 1019 aaKnown RBP22.49■■□□□ 1.19
PSEN1-224ENST00000559361 PPP2R1AP30153 589 aa22.48■■□□□ 1.19
PSEN1-224ENST00000559361 CNGB1Q14028 1251 aaPredicted RBP22.48■■□□□ 1.19
PSEN1-224ENST00000559361 ZC3H4Q9UPT8 1303 aaKnown RBP22.46■■□□□ 1.19
PSEN1-224ENST00000559361 SCN11AQ9UI33 1791 aa22.45■■□□□ 1.19
PSEN1-224ENST00000559361 AEBP1Q8IUX7 1158 aa22.45■■□□□ 1.18
PSEN1-224ENST00000559361 SMC1BQ8NDV3 1235 aa22.45■■□□□ 1.18
PSEN1-224ENST00000559361 AFDNP55196 1824 aaKnown RBP22.45■■□□□ 1.18
PSEN1-224ENST00000559361 C1orf141Q5JVX7 400 aa22.44■■□□□ 1.18
PSEN1-224ENST00000559361 CFAP53Q96M91 514 aa22.44■■□□□ 1.18
PSEN1-224ENST00000559361 NRXN2Q9P2S2 1712 aa22.43■■□□□ 1.18
PSEN1-224ENST00000559361 PRELPP51888 382 aa22.42■■□□□ 1.18
PSEN1-224ENST00000559361 CCDC88AQ3V6T2 1871 aa22.41■■□□□ 1.18
PSEN1-224ENST00000559361 SOS1Q07889 1333 aaPredicted RBP22.41■■□□□ 1.18
PSEN1-224ENST00000559361 USPL1Q5W0Q7 1092 aa22.41■■□□□ 1.18
PSEN1-224ENST00000559361 GLTPD2A6NH11 291 aa22.4■■□□□ 1.18
PSEN1-224ENST00000559361 ZPR1O75312 459 aa22.4■■□□□ 1.18
PSEN1-224ENST00000559361 RASSF7Q02833 373 aa22.4■■□□□ 1.18
PSEN1-224ENST00000559361 DNAJC10Q8IXB1 793 aa22.4■■□□□ 1.18
PSEN1-224ENST00000559361 DLEC1Q9Y238 1755 aa22.4■■□□□ 1.18
PSEN1-224ENST00000559361 LMNB1P20700 586 aa22.39■■□□□ 1.17
PSEN1-224ENST00000559361 NFIXQ14938 502 aa22.39■■□□□ 1.17
PSEN1-224ENST00000559361 SULT6B1Q6IMI4 303 aa22.39■■□□□ 1.17
PSEN1-224ENST00000559361 CYP19A1P11511 503 aaPredicted RBP22.38■■□□□ 1.17
PSEN1-224ENST00000559361 VEGFAP15692 232 aaPredicted RBP22.38■■□□□ 1.17
PSEN1-224ENST00000559361 NARFQ9UHQ1 456 aa22.38■■□□□ 1.17
PSEN1-224ENST00000559361 TNS4Q8IZW8 715 aa22.37■■□□□ 1.17
PSEN1-224ENST00000559361 SLC52A2Q9HAB3 445 aa22.37■■□□□ 1.17
PSEN1-224ENST00000559361 IL13P35225 146 aa22.36■■□□□ 1.17
PSEN1-224ENST00000559361 AKAP4Q5JQC9 854 aa22.36■■□□□ 1.17
PSEN1-224ENST00000559361 BCL2L12Q9HB09 334 aa22.36■■□□□ 1.17
PSEN1-224ENST00000559361 TTLL6Q8N841 843 aa22.35■■□□□ 1.17
PSEN1-224ENST00000559361 LGR6Q9HBX8 967 aa22.35■■□□□ 1.17
PSEN1-224ENST00000559361 VIRMAQ69YN4 1812 aaKnown RBP22.34■■□□□ 1.17
PSEN1-224ENST00000559361 POTECB2RU33 542 aa22.34■■□□□ 1.17
PSEN1-224ENST00000559361 DIAPH1O60610 1272 aaKnown RBP22.34■■□□□ 1.17
PSEN1-224ENST00000559361 SERPINB2P05120 415 aa22.34■■□□□ 1.17
PSEN1-224ENST00000559361 NUDCQ9Y266 331 aa22.34■■□□□ 1.17
PSEN1-224ENST00000559361 COL3A1P02461 1466 aaPredicted RBP22.34■■□□□ 1.17
PSEN1-224ENST00000559361 MRC1P22897 1456 aa22.34■■□□□ 1.17
PSEN1-224ENST00000559361 CCER2I3L3R5 266 aa22.33■■□□□ 1.17
PSEN1-224ENST00000559361 COL15A1P39059 1388 aa22.33■■□□□ 1.17
PSEN1-224ENST00000559361 NFKBIEO00221 500 aa22.32■■□□□ 1.16
PSEN1-224ENST00000559361 ZBTB1Q9Y2K1 713 aa22.32■■□□□ 1.16
PSEN1-224ENST00000559361 TIAM2Q8IVF5 1701 aa22.31■■□□□ 1.16
PSEN1-224ENST00000559361 RNMTO43148 476 aaKnown RBP22.31■■□□□ 1.16
PSEN1-224ENST00000559361 CAPN15O75808 1086 aa22.31■■□□□ 1.16
PSEN1-224ENST00000559361 HSPA1AP0DMV8 641 aaKnown RBP22.31■■□□□ 1.16
PSEN1-224ENST00000559361 HSPA1BP0DMV9 641 aaKnown RBP22.31■■□□□ 1.16
PSEN1-224ENST00000559361 SLC39A6Q13433 755 aa22.31■■□□□ 1.16
PSEN1-224ENST00000559361 DICER1Q9UPY3 1922 aaKnown RBP22.31■■□□□ 1.16
PSEN1-224ENST00000559361 VSIG10Q8N0Z9 540 aa22.3■■□□□ 1.16
PSEN1-224ENST00000559361 C2CD5Q86YS7 1000 aa22.29■■□□□ 1.16
PSEN1-224ENST00000559361 CARMIL3Q8ND23 1372 aa22.28■■□□□ 1.16
PSEN1-224ENST00000559361 H0YIN7 160 aa22.28■■□□□ 1.16
PSEN1-224ENST00000559361 FER1L6Q2WGJ9 1857 aa22.28■■□□□ 1.16
PSEN1-224ENST00000559361 ANKRD31Q8N7Z5 1873 aa22.27■■□□□ 1.16
PSEN1-224ENST00000559361 MRS2Q9HD23 443 aa22.27■■□□□ 1.16
PSEN1-224ENST00000559361 UBR2Q8IWV8 1755 aa22.27■■□□□ 1.16
PSEN1-224ENST00000559361 EIF5P55010 431 aaKnown RBP22.26■■□□□ 1.15
PSEN1-224ENST00000559361 DPY19L2Q6NUT2 758 aa22.25■■□□□ 1.15
PSEN1-224ENST00000559361 MIER1Q8N108 512 aa22.24■■□□□ 1.15
PSEN1-224ENST00000559361 PDZRN3Q9UPQ7 1066 aa22.24■■□□□ 1.15
PSEN1-224ENST00000559361 WDR43Q15061 677 aaKnown RBP eCLIP22.23■■□□□ 1.15
PSEN1-224ENST00000559361 CANXP27824 592 aaKnown RBP22.22■■□□□ 1.15
PSEN1-224ENST00000559361 MTHFSDQ2M296 383 aaKnown RBP22.22■■□□□ 1.15
PSEN1-224ENST00000559361 BRIP1Q9BX63 1249 aa22.22■■□□□ 1.15
PSEN1-224ENST00000559361 U2SURPO15042 1029 aaKnown RBP22.21■■□□□ 1.15
PSEN1-224ENST00000559361 TBC1D9BQ66K14 1250 aa22.21■■□□□ 1.15
PSEN1-224ENST00000559361 PNNQ9H307 717 aaKnown RBP22.21■■□□□ 1.15
PSEN1-224ENST00000559361 CREBZFQ9NS37 354 aa22.21■■□□□ 1.15
PSEN1-224ENST00000559361 LTBP3Q9NS15 1303 aa22.21■■□□□ 1.15
PSEN1-224ENST00000559361 A0A087WZG4 1122 aa22.2■■□□□ 1.14
PSEN1-224ENST00000559361 STARD3NLO95772 234 aa22.2■■□□□ 1.14
PSEN1-224ENST00000559361 HMOX1P09601 288 aa22.2■■□□□ 1.14
PSEN1-224ENST00000559361 PDE6BP35913 854 aa22.2■■□□□ 1.14
PSEN1-224ENST00000559361 ERFEQ4G0M1 354 aa22.2■■□□□ 1.14
PSEN1-224ENST00000559361 BICDL1Q6ZP65 573 aa22.2■■□□□ 1.14
PSEN1-224ENST00000559361 COL11A2P13942 1736 aaPredicted RBP22.2■■□□□ 1.14
PSEN1-224ENST00000559361 C21orf2O43822 256 aa22.19■■□□□ 1.14
PSEN1-224ENST00000559361 U2AF1L5P0DN76 240 aaPredicted RBP22.19■■□□□ 1.14
PSEN1-224ENST00000559361 U2AF1Q01081 240 aaKnown RBP eCLIP22.19■■□□□ 1.14
PSEN1-224ENST00000559361 PRR5LQ6MZQ0 368 aa22.19■■□□□ 1.14
PSEN1-224ENST00000559361 ZNF622Q969S3 477 aaKnown RBP eCLIP22.19■■□□□ 1.14
PSEN1-224ENST00000559361 SLX4Q8IY92 1834 aa22.18■■□□□ 1.14
PSEN1-224ENST00000559361 CHADLQ6NUI6 762 aa22.18■■□□□ 1.14
PSEN1-224ENST00000559361 PNISRQ8TF01 805 aaKnown RBP22.17■■□□□ 1.14
PSEN1-224ENST00000559361 SCN7AQ01118 1682 aa22.17■■□□□ 1.14
PSEN1-224ENST00000559361 POTEIP0CG38 1075 aa22.16■■□□□ 1.14
PSEN1-224ENST00000559361 POTEJP0CG39 1038 aa22.16■■□□□ 1.14
PSEN1-224ENST00000559361 CCDC184Q52MB2 194 aa22.16■■□□□ 1.14
PSEN1-224ENST00000559361 ZNF496Q96IT1 587 aaPredicted RBP22.16■■□□□ 1.14
PSEN1-224ENST00000559361 TEX13AQ9BXU3 409 aaPredicted RBP22.15■■□□□ 1.14
PSEN1-224ENST00000559361 TAOK3Q9H2K8 898 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms