RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 GNAT3A8MTJ3 354 aa20.53■□□□□ 0.88
IRF9-204ENST00000559229 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
IRF9-204ENST00000559229 TTC5Q8N0Z6 440 aa20.53■□□□□ 0.88
IRF9-204ENST00000559229 COL15A1P39059 1388 aa20.53■□□□□ 0.88
IRF9-204ENST00000559229 COL3A1P02461 1466 aaPredicted RBP20.53■□□□□ 0.88
IRF9-204ENST00000559229 ADAMTS7Q9UKP4 1686 aa20.53■□□□□ 0.88
IRF9-204ENST00000559229 STARD3NLO95772 234 aa20.52■□□□□ 0.88
IRF9-204ENST00000559229 CHRNA5P30532 468 aa20.52■□□□□ 0.88
IRF9-204ENST00000559229 NFIXQ14938 502 aa20.52■□□□□ 0.88
IRF9-204ENST00000559229 IL17REQ8NFR9 667 aa20.52■□□□□ 0.88
IRF9-204ENST00000559229 TEFQ10587 303 aa20.51■□□□□ 0.87
IRF9-204ENST00000559229 BCL2L12Q9HB09 334 aa20.51■□□□□ 0.87
IRF9-204ENST00000559229 C9orf131Q5VYM1 1079 aa20.5■□□□□ 0.87
IRF9-204ENST00000559229 ZNF790Q6PG37 636 aa20.5■□□□□ 0.87
IRF9-204ENST00000559229 CANXP27824 592 aaKnown RBP20.49■□□□□ 0.87
IRF9-204ENST00000559229 EIF5P55010 431 aaKnown RBP20.49■□□□□ 0.87
IRF9-204ENST00000559229 ZNF496Q96IT1 587 aaPredicted RBP20.49■□□□□ 0.87
IRF9-204ENST00000559229 TEX13AQ9BXU3 409 aaPredicted RBP20.49■□□□□ 0.87
IRF9-204ENST00000559229 BRCA1P38398 1863 aaKnown RBP20.49■□□□□ 0.87
IRF9-204ENST00000559229 A0A087WZG4 1122 aa20.48■□□□□ 0.87
IRF9-204ENST00000559229 TOMM70O94826 608 aa20.48■□□□□ 0.87
IRF9-204ENST00000559229 SERPINB2P05120 415 aa20.48■□□□□ 0.87
IRF9-204ENST00000559229 CFAP53Q96M91 514 aa20.47■□□□□ 0.87
IRF9-204ENST00000559229 HEG1Q9ULI3 1381 aa20.46■□□□□ 0.87
IRF9-204ENST00000559229 PHACTR3Q96KR7 559 aa20.46■□□□□ 0.87
IRF9-204ENST00000559229 RSPH6AQ9H0K4 717 aa20.45■□□□□ 0.86
IRF9-204ENST00000559229 NMRK2Q9NPI5 230 aa20.45■□□□□ 0.86
IRF9-204ENST00000559229 NUDCQ9Y266 331 aa20.45■□□□□ 0.86
IRF9-204ENST00000559229 CEMIPQ8WUJ3 1361 aa20.45■□□□□ 0.86
IRF9-204ENST00000559229 ARFGEF1Q9Y6D6 1849 aa20.44■□□□□ 0.86
IRF9-204ENST00000559229 PRKAR2BP31323 418 aa20.44■□□□□ 0.86
IRF9-204ENST00000559229 FMNL2Q96PY5 1086 aa20.44■□□□□ 0.86
IRF9-204ENST00000559229 RNF181Q9P0P0 153 aa20.44■□□□□ 0.86
IRF9-204ENST00000559229 UBR2Q8IWV8 1755 aa20.44■□□□□ 0.86
IRF9-204ENST00000559229 VIRMAQ69YN4 1812 aaKnown RBP20.43■□□□□ 0.86
IRF9-204ENST00000559229 BTBD11A6QL63 1104 aa20.42■□□□□ 0.86
IRF9-204ENST00000559229 IL6STP40189 918 aaPredicted RBP20.42■□□□□ 0.86
IRF9-204ENST00000559229 BICDL1Q6ZP65 573 aa20.42■□□□□ 0.86
IRF9-204ENST00000559229 TTLL6Q8N841 843 aa20.42■□□□□ 0.86
IRF9-204ENST00000559229 H0YIN7 160 aa20.41■□□□□ 0.86
IRF9-204ENST00000559229 APLP1P51693 650 aa20.41■□□□□ 0.86
IRF9-204ENST00000559229 TBC1D9BQ66K14 1250 aa20.41■□□□□ 0.86
IRF9-204ENST00000559229 KDM2BQ8NHM5 1336 aa20.41■□□□□ 0.86
IRF9-204ENST00000559229 PPP2R1AP30153 589 aa20.4■□□□□ 0.86
IRF9-204ENST00000559229 C2CD5Q86YS7 1000 aa20.4■□□□□ 0.86
IRF9-204ENST00000559229 RBM46Q8TBY0 533 aaKnown RBP20.4■□□□□ 0.86
IRF9-204ENST00000559229 NRXN2Q9P2S2 1712 aa20.4■□□□□ 0.86
IRF9-204ENST00000559229 TBC1D2BQ9UPU7 963 aa20.4■□□□□ 0.86
IRF9-204ENST00000559229 KCNQ3O43525 872 aa20.39■□□□□ 0.85
IRF9-204ENST00000559229 A1BGP04217 495 aa20.39■□□□□ 0.85
IRF9-204ENST00000559229 U2AF1L5P0DN76 240 aaPredicted RBP20.39■□□□□ 0.85
IRF9-204ENST00000559229 U2AF1Q01081 240 aaKnown RBP eCLIP20.39■□□□□ 0.85
IRF9-204ENST00000559229 NPM2Q86SE8 214 aaKnown RBP20.39■□□□□ 0.85
IRF9-204ENST00000559229 PDZRN3Q9UPQ7 1066 aa20.39■□□□□ 0.85
IRF9-204ENST00000559229 ZNF330Q9Y3S2 320 aaPredicted RBP20.39■□□□□ 0.85
IRF9-204ENST00000559229 C16orf71Q8IYS4 520 aaPredicted RBP20.38■□□□□ 0.85
IRF9-204ENST00000559229 RTF1Q92541 710 aaKnown RBP20.38■□□□□ 0.85
IRF9-204ENST00000559229 BRIP1Q9BX63 1249 aa20.38■□□□□ 0.85
IRF9-204ENST00000559229 AFDNP55196 1824 aaKnown RBP20.38■□□□□ 0.85
IRF9-204ENST00000559229 CARMIL3Q8ND23 1372 aa20.37■□□□□ 0.85
IRF9-204ENST00000559229 ZC3H4Q9UPT8 1303 aaKnown RBP20.37■□□□□ 0.85
IRF9-204ENST00000559229 LMNB1P20700 586 aa20.37■□□□□ 0.85
IRF9-204ENST00000559229 PDE6BP35913 854 aa20.37■□□□□ 0.85
IRF9-204ENST00000559229 RASSF7Q02833 373 aa20.37■□□□□ 0.85
IRF9-204ENST00000559229 CAMTA2O94983 1202 aa20.36■□□□□ 0.85
IRF9-204ENST00000559229 RRAGCQ9HB90 399 aa20.36■□□□□ 0.85
IRF9-204ENST00000559229 USP16Q9Y5T5 823 aa20.36■□□□□ 0.85
IRF9-204ENST00000559229 SIPA1L3O60292 1781 aaPredicted RBP20.36■□□□□ 0.85
IRF9-204ENST00000559229 HTATSF1O43719 755 aaKnown RBP20.35■□□□□ 0.85
IRF9-204ENST00000559229 PRR5LQ6MZQ0 368 aa20.35■□□□□ 0.85
IRF9-204ENST00000559229 DNAJC5GQ8N7S2 189 aa20.35■□□□□ 0.85
IRF9-204ENST00000559229 SETDB2Q96T68 719 aa20.35■□□□□ 0.85
IRF9-204ENST00000559229 PRELPP51888 382 aa20.34■□□□□ 0.85
IRF9-204ENST00000559229 FSTL1Q12841 308 aa20.34■□□□□ 0.85
IRF9-204ENST00000559229 MCM10Q7L590 875 aa20.34■□□□□ 0.85
IRF9-204ENST00000559229 DZIP3Q86Y13 1208 aaKnown RBP20.34■□□□□ 0.85
IRF9-204ENST00000559229 CAPN15O75808 1086 aa20.33■□□□□ 0.85
IRF9-204ENST00000559229 SNRPA1P09661 255 aaKnown RBP20.33■□□□□ 0.85
IRF9-204ENST00000559229 ZNF622Q969S3 477 aaKnown RBP eCLIP20.33■□□□□ 0.85
IRF9-204ENST00000559229 NFKBIEO00221 500 aa20.32■□□□□ 0.84
IRF9-204ENST00000559229 CLEC4GQ6UXB4 293 aa20.32■□□□□ 0.84
IRF9-204ENST00000559229 CCDC24Q8N4L8 307 aa20.32■□□□□ 0.84
IRF9-204ENST00000559229 SBF1O95248 1867 aa20.31■□□□□ 0.84
IRF9-204ENST00000559229 PRAMEF22A3QJZ6 481 aa20.31■□□□□ 0.84
IRF9-204ENST00000559229 GLTPD2A6NH11 291 aa20.31■□□□□ 0.84
IRF9-204ENST00000559229 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
IRF9-204ENST00000559229 COL13A1Q5TAT6 717 aaPredicted RBP20.31■□□□□ 0.84
IRF9-204ENST00000559229 CNBD1Q8NA66 436 aa20.31■□□□□ 0.84
IRF9-204ENST00000559229 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
IRF9-204ENST00000559229 DLEC1Q9Y238 1755 aa20.3■□□□□ 0.84
IRF9-204ENST00000559229 SCN7AQ01118 1682 aa20.29■□□□□ 0.84
IRF9-204ENST00000559229 NPHP1O15259 732 aa20.29■□□□□ 0.84
IRF9-204ENST00000559229 C21orf2O43822 256 aa20.29■□□□□ 0.84
IRF9-204ENST00000559229 ST5P78524 1137 aa20.29■□□□□ 0.84
IRF9-204ENST00000559229 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
IRF9-204ENST00000559229 VEGFAP15692 232 aaPredicted RBP20.28■□□□□ 0.84
IRF9-204ENST00000559229 CNKSR1Q969H4 720 aa20.28■□□□□ 0.84
IRF9-204ENST00000559229 ZNF652Q9Y2D9 606 aa20.28■□□□□ 0.84
IRF9-204ENST00000559229 RGL2O15211 777 aa20.27■□□□□ 0.84
IRF9-204ENST00000559229 SRGNP10124 158 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms