RNA–Protein interactions for RNA: ENST00000559145.1

RORA-209, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-209ENST00000559145 CCNL1Q9UK58 526 aaPredicted RBP13.12□□□□□ -0.31
RORA-209ENST00000559145 TJP1Q07157 1748 aa13.11□□□□□ -0.31
RORA-209ENST00000559145 PLIN1O60240 522 aa13.11□□□□□ -0.31
RORA-209ENST00000559145 MYL6BP14649 208 aa13.11□□□□□ -0.31
RORA-209ENST00000559145 SF3B2Q13435 895 aaKnown RBP13.11□□□□□ -0.31
RORA-209ENST00000559145 ZKSCAN2Q63HK3 967 aa13.11□□□□□ -0.31
RORA-209ENST00000559145 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
RORA-209ENST00000559145 DDX21Q9NR30 783 aaKnown RBP eCLIP13.11□□□□□ -0.31
RORA-209ENST00000559145 NOB1Q9ULX3 412 aaKnown RBP13.11□□□□□ -0.31
RORA-209ENST00000559145 ERBB4Q15303 1308 aa13.11□□□□□ -0.31
RORA-209ENST00000559145 ANXA1P04083 346 aa13.1□□□□□ -0.31
RORA-209ENST00000559145 ITPK1Q13572 414 aa13.1□□□□□ -0.31
RORA-209ENST00000559145 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
RORA-209ENST00000559145 LY75O60449 1722 aa13.09□□□□□ -0.31
RORA-209ENST00000559145 A1BGP04217 495 aa13.09□□□□□ -0.31
RORA-209ENST00000559145 CYP19A1P11511 503 aaPredicted RBP13.09□□□□□ -0.31
RORA-209ENST00000559145 PIP4K2AP48426 406 aaPredicted RBP13.09□□□□□ -0.31
RORA-209ENST00000559145 BRPF1P55201 1214 aaPredicted RBP13.09□□□□□ -0.31
RORA-209ENST00000559145 KCNQ4P56696 695 aa13.09□□□□□ -0.31
RORA-209ENST00000559145 FLIIQ13045 1269 aa13.09□□□□□ -0.31
RORA-209ENST00000559145 FKBP5Q13451 457 aaPredicted RBP13.09□□□□□ -0.31
RORA-209ENST00000559145 NPM2Q86SE8 214 aaKnown RBP13.09□□□□□ -0.31
RORA-209ENST00000559145 FTSJ3Q8IY81 847 aaKnown RBP13.09□□□□□ -0.31
RORA-209ENST00000559145 ZNF330Q9Y3S2 320 aaPredicted RBP13.09□□□□□ -0.31
RORA-209ENST00000559145 CICQ96RK0 1608 aaPredicted RBP13.09□□□□□ -0.31
RORA-209ENST00000559145 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.31
RORA-209ENST00000559145 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
RORA-209ENST00000559145 MS4A1P11836 297 aa13.08□□□□□ -0.32
RORA-209ENST00000559145 IRX6P78412 446 aaPredicted RBP13.08□□□□□ -0.32
RORA-209ENST00000559145 PROSER3Q2NL68 480 aa13.08□□□□□ -0.32
RORA-209ENST00000559145 ATF7IPQ6VMQ6 1270 aa13.08□□□□□ -0.32
RORA-209ENST00000559145 G2E3Q7L622 706 aa13.08□□□□□ -0.32
RORA-209ENST00000559145 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
RORA-209ENST00000559145 PHAXQ9H814 394 aaKnown RBP13.08□□□□□ -0.32
RORA-209ENST00000559145 CCDC87Q9NVE4 849 aa13.08□□□□□ -0.32
RORA-209ENST00000559145 PTPRCP08575 1304 aa13.08□□□□□ -0.32
RORA-209ENST00000559145 RNF123Q5XPI4 1314 aa13.08□□□□□ -0.32
RORA-209ENST00000559145 DDX58O95786 925 aaKnown RBP13.07□□□□□ -0.32
RORA-209ENST00000559145 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
RORA-209ENST00000559145 AIMP1Q12904 312 aaKnown RBP13.07□□□□□ -0.32
RORA-209ENST00000559145 SLC27A3Q5K4L6 730 aa13.07□□□□□ -0.32
RORA-209ENST00000559145 LINC00116Q8NCU8 138 aa13.07□□□□□ -0.32
RORA-209ENST00000559145 CLUAP1Q96AJ1 413 aa13.07□□□□□ -0.32
RORA-209ENST00000559145 ARXQ96QS3 562 aa13.07□□□□□ -0.32
RORA-209ENST00000559145 NBPF26B4DH59 902 aa13.06□□□□□ -0.32
RORA-209ENST00000559145 PLSCR1O15162 318 aa13.06□□□□□ -0.32
RORA-209ENST00000559145 TRIM27P14373 513 aa13.06□□□□□ -0.32
RORA-209ENST00000559145 HMGB2P26583 209 aaKnown RBP13.06□□□□□ -0.32
RORA-209ENST00000559145 BAG6P46379 1132 aa13.06□□□□□ -0.32
RORA-209ENST00000559145 PDIA6Q15084 440 aa13.06□□□□□ -0.32
RORA-209ENST00000559145 TXNRD1Q16881 649 aa13.06□□□□□ -0.32
RORA-209ENST00000559145 NBPF14Q5TI25 921 aa13.06□□□□□ -0.32
RORA-209ENST00000559145 NBPF10Q6P3W6 841 aaKnown RBP13.06□□□□□ -0.32
RORA-209ENST00000559145 DZIP1LQ8IYY4 767 aaKnown RBP13.06□□□□□ -0.32
RORA-209ENST00000559145 NBPF15Q8N660 670 aa13.06□□□□□ -0.32
RORA-209ENST00000559145 XAGE3Q8WTP9 111 aa13.06□□□□□ -0.32
RORA-209ENST00000559145 ARHGAP45Q92619 1136 aa13.06□□□□□ -0.32
RORA-209ENST00000559145 ZBTB1Q9Y2K1 713 aa13.06□□□□□ -0.32
RORA-209ENST00000559145 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
RORA-209ENST00000559145 COPS6Q7L5N1 327 aa13.05□□□□□ -0.32
RORA-209ENST00000559145 PANK1Q8TE04 598 aa13.05□□□□□ -0.32
RORA-209ENST00000559145 AK7Q96M32 723 aa13.05□□□□□ -0.32
RORA-209ENST00000559145 TNNQ9UQP3 1299 aa13.05□□□□□ -0.32
RORA-209ENST00000559145 CNTNAP4Q9C0A0 1308 aa13.05□□□□□ -0.32
RORA-209ENST00000559145 GNPATO15228 680 aa13.04□□□□□ -0.32
RORA-209ENST00000559145 IL6STP40189 918 aaPredicted RBP13.04□□□□□ -0.32
RORA-209ENST00000559145 PDE3AQ14432 1141 aa13.04□□□□□ -0.32
RORA-209ENST00000559145 C20orf194Q5TEA3 1177 aa13.04□□□□□ -0.32
RORA-209ENST00000559145 INTS5Q6P9B9 1019 aaKnown RBP13.04□□□□□ -0.32
RORA-209ENST00000559145 SLC4A10Q6U841 1118 aa13.04□□□□□ -0.32
RORA-209ENST00000559145 KIF6Q6ZMV9 814 aa13.04□□□□□ -0.32
RORA-209ENST00000559145 RIC3Q7Z5B4 369 aa13.04□□□□□ -0.32
RORA-209ENST00000559145 RGPD3A6NKT7 1758 aaPredicted RBP13.03□□□□□ -0.32
RORA-209ENST00000559145 RGPD4Q7Z3J3 1758 aa13.03□□□□□ -0.32
RORA-209ENST00000559145 FKBP8Q14318 412 aa13.03□□□□□ -0.32
RORA-209ENST00000559145 LRRC4BQ9NT99 713 aa13.03□□□□□ -0.32
RORA-209ENST00000559145 RREB1Q92766 1687 aa13.02□□□□□ -0.32
RORA-209ENST00000559145 C4BP0C0L5 1744 aa13.02□□□□□ -0.32
RORA-209ENST00000559145 PI4KAP2A4QPH2 592 aa13.02□□□□□ -0.33
RORA-209ENST00000559145 F6X3S4 739 aa13.02□□□□□ -0.33
RORA-209ENST00000559145 EN1Q05925 392 aaPredicted RBP13.02□□□□□ -0.33
RORA-209ENST00000559145 RC3H1Q5TC82 1133 aaKnown RBP13.02□□□□□ -0.33
RORA-209ENST00000559145 KSR2Q6VAB6 950 aa13.02□□□□□ -0.33
RORA-209ENST00000559145 LRP10Q7Z4F1 713 aa13.02□□□□□ -0.33
RORA-209ENST00000559145 CCDC125Q86Z20 511 aa13.02□□□□□ -0.33
RORA-209ENST00000559145 ITPRIPQ8IWB1 547 aa13.02□□□□□ -0.33
RORA-209ENST00000559145 PI4KAP1Q8N8J0 262 aa13.02□□□□□ -0.33
RORA-209ENST00000559145 CRBNQ96SW2 442 aa13.02□□□□□ -0.33
RORA-209ENST00000559145 MAP3K2Q9Y2U5 619 aa13.02□□□□□ -0.33
RORA-209ENST00000559145 COG6Q9Y2V7 657 aa13.02□□□□□ -0.33
RORA-209ENST00000559145 RTCBQ9Y3I0 505 aaKnown RBP13.02□□□□□ -0.33
RORA-209ENST00000559145 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
RORA-209ENST00000559145 RLBP1P12271 317 aa13.01□□□□□ -0.33
RORA-209ENST00000559145 CCT4P50991 539 aaKnown RBP13.01□□□□□ -0.33
RORA-209ENST00000559145 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
RORA-209ENST00000559145 TTLL7Q6ZT98 887 aa13.01□□□□□ -0.33
RORA-209ENST00000559145 ANKRD13DQ6ZTN6 518 aa13.01□□□□□ -0.33
RORA-209ENST00000559145 DZIP3Q86Y13 1208 aaKnown RBP13.01□□□□□ -0.33
RORA-209ENST00000559145 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
RORA-209ENST00000559145 DNAAF4Q8WXU2 420 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms