RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 TMEM214Q6NUQ4 689 aaKnown RBP8.4□□□□□ -1.06
CASC4-207ENST00000559037 NBPF10Q6P3W6 841 aaKnown RBP8.4□□□□□ -1.06
CASC4-207ENST00000559037 PPARGC1BQ86YN6 1023 aaKnown RBP8.4□□□□□ -1.06
CASC4-207ENST00000559037 SIX5Q8N196 739 aa8.4□□□□□ -1.06
CASC4-207ENST00000559037 RHBDD1Q8TEB9 315 aa8.4□□□□□ -1.06
CASC4-207ENST00000559037 DNAAF2Q9NVR5 837 aaKnown RBP8.4□□□□□ -1.06
CASC4-207ENST00000559037 RUSC2Q8N2Y8 1516 aa8.39□□□□□ -1.07
CASC4-207ENST00000559037 PRG4Q92954 1404 aaPredicted RBP8.39□□□□□ -1.07
CASC4-207ENST00000559037 SENP3-EIF4A1A0A087X0R7 540 aa8.39□□□□□ -1.07
CASC4-207ENST00000559037 ITGA6P23229 1130 aa8.39□□□□□ -1.07
CASC4-207ENST00000559037 SMTNP53814 917 aa8.39□□□□□ -1.07
CASC4-207ENST00000559037 NANOS1Q8WY41 292 aaKnown RBP8.39□□□□□ -1.07
CASC4-207ENST00000559037 CARMIL1Q5VZK9 1371 aa8.38□□□□□ -1.07
CASC4-207ENST00000559037 OGFOD1Q8N543 542 aa8.38□□□□□ -1.07
CASC4-207ENST00000559037 KIAA0586Q9BVV6 1533 aa8.38□□□□□ -1.07
CASC4-207ENST00000559037 A0A1B0GTH6 734 aa8.37□□□□□ -1.07
CASC4-207ENST00000559037 A6NJY4 79 aa8.37□□□□□ -1.07
CASC4-207ENST00000559037 FAM196BA6NMK8 535 aa8.37□□□□□ -1.07
CASC4-207ENST00000559037 CDK2AP1O14519 115 aa8.37□□□□□ -1.07
CASC4-207ENST00000559037 LMOD1P29536 600 aaPredicted RBP8.37□□□□□ -1.07
CASC4-207ENST00000559037 CLDN10P78369 228 aa8.37□□□□□ -1.07
CASC4-207ENST00000559037 POU4F2Q12837 409 aa8.37□□□□□ -1.07
CASC4-207ENST00000559037 CCDC102BQ68D86 513 aa8.37□□□□□ -1.07
CASC4-207ENST00000559037 LARP1Q6PKG0 1096 aaKnown RBP8.37□□□□□ -1.07
CASC4-207ENST00000559037 VRTNQ9H8Y1 702 aa8.37□□□□□ -1.07
CASC4-207ENST00000559037 TIMMDC1Q9NPL8 285 aa8.37□□□□□ -1.07
CASC4-207ENST00000559037 SERPINA10Q9UK55 444 aa8.37□□□□□ -1.07
CASC4-207ENST00000559037 KIF13AQ9H1H9 1805 aa8.36□□□□□ -1.07
CASC4-207ENST00000559037 H7C1W4 665 aa8.36□□□□□ -1.07
CASC4-207ENST00000559037 WIPF1O43516 503 aa8.36□□□□□ -1.07
CASC4-207ENST00000559037 RASA1P20936 1047 aa8.36□□□□□ -1.07
CASC4-207ENST00000559037 CFAP70Q5T0N1 1121 aa8.36□□□□□ -1.07
CASC4-207ENST00000559037 TPCN2Q8NHX9 752 aa8.36□□□□□ -1.07
CASC4-207ENST00000559037 C1orf216Q8TAB5 229 aa8.36□□□□□ -1.07
CASC4-207ENST00000559037 CCDC97Q96F63 343 aaPredicted RBP8.36□□□□□ -1.07
CASC4-207ENST00000559037 NIFKQ9BYG3 293 aaKnown RBP8.36□□□□□ -1.07
CASC4-207ENST00000559037 ZNF358Q9NW07 568 aa8.36□□□□□ -1.07
CASC4-207ENST00000559037 RHOQP17081 205 aa8.35□□□□□ -1.07
CASC4-207ENST00000559037 LBRQ14739 615 aaKnown RBP8.35□□□□□ -1.07
CASC4-207ENST00000559037 ZBTB7BO15156 539 aaPredicted RBP8.34□□□□□ -1.07
CASC4-207ENST00000559037 F11P03951 625 aa8.34□□□□□ -1.07
CASC4-207ENST00000559037 VEGFBP49765 207 aa8.34□□□□□ -1.07
CASC4-207ENST00000559037 C4orf17Q53FE4 359 aa8.34□□□□□ -1.07
CASC4-207ENST00000559037 KANK4Q5T7N3 995 aaPredicted RBP8.34□□□□□ -1.07
CASC4-207ENST00000559037 TRIM22Q8IYM9 498 aa8.34□□□□□ -1.07
CASC4-207ENST00000559037 SCHIP1Q9P0W5 487 aaPredicted RBP8.34□□□□□ -1.07
CASC4-207ENST00000559037 SERTAD1Q9UHV2 236 aa8.34□□□□□ -1.07
CASC4-207ENST00000559037 IQSEC3Q9UPP2 1182 aaPredicted RBP8.34□□□□□ -1.07
CASC4-207ENST00000559037 STAU1O95793 577 aaKnown RBP8.33□□□□□ -1.08
CASC4-207ENST00000559037 SV2AQ7L0J3 742 aa8.33□□□□□ -1.08
CASC4-207ENST00000559037 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.33□□□□□ -1.08
CASC4-207ENST00000559037 KIAA1024Q9UPX6 916 aa8.33□□□□□ -1.08
CASC4-207ENST00000559037 USP17L15C9J2P7 530 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 USP17L10C9JJH3 530 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 USP17L13C9JLJ4 530 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 USP17L12C9JPN9 530 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 USP17L11C9JVI0 530 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 USP17L21D6R901 530 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 USP17L18D6R9N7 530 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 USP17L22D6RA61 530 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 USP17L17D6RBQ6 530 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 USP17L19D6RCP7 530 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 USP17L20D6RJB6 530 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 EPHA4P54764 986 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 SEC13P55735 322 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 FOXK2Q01167 660 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 USP17L24Q0WX57 530 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 PTK7Q13308 1070 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 NBPF1Q3BBV0 1214 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 FOXR1Q6PIV2 292 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 ZNF594Q96JF6 807 aaPredicted RBP8.32□□□□□ -1.08
CASC4-207ENST00000559037 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
CASC4-207ENST00000559037 ERBB4Q15303 1308 aa8.31□□□□□ -1.08
CASC4-207ENST00000559037 GAS2L2Q8NHY3 880 aa8.31□□□□□ -1.08
CASC4-207ENST00000559037 ZDHHC3Q9NYG2 299 aa8.31□□□□□ -1.08
CASC4-207ENST00000559037 CHMP3Q9Y3E7 222 aa8.31□□□□□ -1.08
CASC4-207ENST00000559037 ADCY10Q96PN6 1610 aa8.3□□□□□ -1.08
CASC4-207ENST00000559037 DKK1O94907 266 aa8.3□□□□□ -1.08
CASC4-207ENST00000559037 CSB-PGBD3P0DP91 1061 aa8.3□□□□□ -1.08
CASC4-207ENST00000559037 INSM1Q01101 510 aaPredicted RBP8.3□□□□□ -1.08
CASC4-207ENST00000559037 CRTC2Q53ET0 693 aaPredicted RBP8.3□□□□□ -1.08
CASC4-207ENST00000559037 ANKMY2Q8IV38 441 aa8.3□□□□□ -1.08
CASC4-207ENST00000559037 ZNF295-AS1Q8N0V1 137 aa8.3□□□□□ -1.08
CASC4-207ENST00000559037 PGBD3Q8N328 593 aa8.3□□□□□ -1.08
CASC4-207ENST00000559037 GAS2L1Q99501 681 aaPredicted RBP8.3□□□□□ -1.08
CASC4-207ENST00000559037 IQGAP2Q13576 1575 aa8.3□□□□□ -1.08
CASC4-207ENST00000559037 CDC14CA4D256 554 aa8.29□□□□□ -1.08
CASC4-207ENST00000559037 TATP17735 454 aaPredicted RBP8.29□□□□□ -1.08
CASC4-207ENST00000559037 GMPRP36959 345 aa8.29□□□□□ -1.08
CASC4-207ENST00000559037 PLA2G4AP47712 749 aa8.29□□□□□ -1.08
CASC4-207ENST00000559037 PSMA6P60900 246 aaKnown RBP8.29□□□□□ -1.08
CASC4-207ENST00000559037 ELOAQ14241 798 aaKnown RBP8.29□□□□□ -1.08
CASC4-207ENST00000559037 TEAD4Q15561 434 aa8.29□□□□□ -1.08
CASC4-207ENST00000559037 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
CASC4-207ENST00000559037 RIPOR1Q6ZS17 1223 aa8.29□□□□□ -1.08
CASC4-207ENST00000559037 ZNF837Q96EG3 531 aaPredicted RBP8.29□□□□□ -1.08
CASC4-207ENST00000559037 CRISPLD1Q9H336 500 aa8.29□□□□□ -1.08
CASC4-207ENST00000559037 GPC6Q9Y625 555 aaPredicted RBP8.29□□□□□ -1.08
CASC4-207ENST00000559037 CTTNBP2Q8WZ74 1663 aa8.29□□□□□ -1.08
CASC4-207ENST00000559037 PHKA2P46019 1235 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms