RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 LMNB1P20700 586 aa10.42□□□□□ -0.74
HMG20A-207ENST00000559035 CDCA8Q53HL2 280 aa10.42□□□□□ -0.74
HMG20A-207ENST00000559035 CCDC88AQ3V6T2 1871 aa10.42□□□□□ -0.74
HMG20A-207ENST00000559035 SLC34A2O95436 690 aa10.41□□□□□ -0.74
HMG20A-207ENST00000559035 ZNF530Q6P9A1 599 aaPredicted RBP10.41□□□□□ -0.74
HMG20A-207ENST00000559035 ARFGEF2Q9Y6D5 1785 aa10.41□□□□□ -0.74
HMG20A-207ENST00000559035 COL15A1P39059 1388 aa10.4□□□□□ -0.74
HMG20A-207ENST00000559035 ADAMTSL1Q8N6G6 1762 aa10.4□□□□□ -0.74
HMG20A-207ENST00000559035 PTCD1O75127 700 aaKnown RBP10.4□□□□□ -0.74
HMG20A-207ENST00000559035 NFIXQ14938 502 aa10.4□□□□□ -0.74
HMG20A-207ENST00000559035 BCL2L12Q9HB09 334 aa10.4□□□□□ -0.74
HMG20A-207ENST00000559035 THSD7BQ9C0I4 1608 aa10.4□□□□□ -0.75
HMG20A-207ENST00000559035 VIRMAQ69YN4 1812 aaKnown RBP10.4□□□□□ -0.75
HMG20A-207ENST00000559035 CABP4P57796 275 aa10.39□□□□□ -0.75
HMG20A-207ENST00000559035 AMOTQ4VCS5 1084 aa10.39□□□□□ -0.75
HMG20A-207ENST00000559035 PLEKHO1Q53GL0 409 aaPredicted RBP10.39□□□□□ -0.75
HMG20A-207ENST00000559035 USPL1Q5W0Q7 1092 aa10.39□□□□□ -0.75
HMG20A-207ENST00000559035 AEBP1Q8IUX7 1158 aa10.39□□□□□ -0.75
HMG20A-207ENST00000559035 CNTNAP1P78357 1384 aa10.39□□□□□ -0.75
HMG20A-207ENST00000559035 CREBZFQ9NS37 354 aa10.38□□□□□ -0.75
HMG20A-207ENST00000559035 LTBP3Q9NS15 1303 aa10.37□□□□□ -0.75
HMG20A-207ENST00000559035 CYP19A1P11511 503 aaPredicted RBP10.37□□□□□ -0.75
HMG20A-207ENST00000559035 DNAJC10Q8IXB1 793 aa10.37□□□□□ -0.75
HMG20A-207ENST00000559035 TTLL6Q8N841 843 aa10.37□□□□□ -0.75
HMG20A-207ENST00000559035 NFATC2IPQ8NCF5 419 aa10.37□□□□□ -0.75
HMG20A-207ENST00000559035 NARFQ9UHQ1 456 aa10.37□□□□□ -0.75
HMG20A-207ENST00000559035 BCORQ6W2J9 1755 aa10.37□□□□□ -0.75
HMG20A-207ENST00000559035 PASKQ96RG2 1323 aa10.36□□□□□ -0.75
HMG20A-207ENST00000559035 FOXN1O15353 648 aa10.36□□□□□ -0.75
HMG20A-207ENST00000559035 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
HMG20A-207ENST00000559035 POTEJP0CG39 1038 aa10.36□□□□□ -0.75
HMG20A-207ENST00000559035 MTHFSP49914 203 aa10.36□□□□□ -0.75
HMG20A-207ENST00000559035 PRDM10Q9NQV6 1147 aa10.36□□□□□ -0.75
HMG20A-207ENST00000559035 ZBTB1Q9Y2K1 713 aa10.36□□□□□ -0.75
HMG20A-207ENST00000559035 SCN4AP35499 1836 aa10.35□□□□□ -0.75
HMG20A-207ENST00000559035 ZPR1O75312 459 aa10.35□□□□□ -0.75
HMG20A-207ENST00000559035 SERPINB2P05120 415 aa10.35□□□□□ -0.75
HMG20A-207ENST00000559035 C1orf141Q5JVX7 400 aa10.35□□□□□ -0.75
HMG20A-207ENST00000559035 SLC52A2Q9HAB3 445 aa10.35□□□□□ -0.75
HMG20A-207ENST00000559035 MKRN1Q9UHC7 482 aaKnown RBP10.35□□□□□ -0.75
HMG20A-207ENST00000559035 CHADLQ6NUI6 762 aa10.34□□□□□ -0.75
HMG20A-207ENST00000559035 C2CD5Q86YS7 1000 aa10.34□□□□□ -0.75
HMG20A-207ENST00000559035 SIPA1L3O60292 1781 aaPredicted RBP10.34□□□□□ -0.75
HMG20A-207ENST00000559035 CACNA1SQ13698 1873 aa10.34□□□□□ -0.75
HMG20A-207ENST00000559035 SLX4Q8IY92 1834 aa10.33□□□□□ -0.76
HMG20A-207ENST00000559035 TNNT2P45379 298 aaPredicted RBP10.33□□□□□ -0.76
HMG20A-207ENST00000559035 L3MBTL3Q96JM7 780 aaPredicted RBP10.33□□□□□ -0.76
HMG20A-207ENST00000559035 EIF5P55010 431 aaKnown RBP10.32□□□□□ -0.76
HMG20A-207ENST00000559035 AKAP4Q5JQC9 854 aa10.32□□□□□ -0.76
HMG20A-207ENST00000559035 VSIG10Q8N0Z9 540 aa10.32□□□□□ -0.76
HMG20A-207ENST00000559035 SNED1Q8TER0 1413 aa10.32□□□□□ -0.76
HMG20A-207ENST00000559035 H0YIN7 160 aa10.31□□□□□ -0.76
HMG20A-207ENST00000559035 IL13P35225 146 aa10.31□□□□□ -0.76
HMG20A-207ENST00000559035 SLC39A6Q13433 755 aa10.31□□□□□ -0.76
HMG20A-207ENST00000559035 ERFEQ4G0M1 354 aa10.31□□□□□ -0.76
HMG20A-207ENST00000559035 SULT6B1Q6IMI4 303 aa10.31□□□□□ -0.76
HMG20A-207ENST00000559035 PRR5LQ6MZQ0 368 aa10.31□□□□□ -0.76
HMG20A-207ENST00000559035 DPY19L2Q6NUT2 758 aa10.31□□□□□ -0.76
HMG20A-207ENST00000559035 BRIP1Q9BX63 1249 aa10.31□□□□□ -0.76
HMG20A-207ENST00000559035 WBP1LQ9NX94 342 aa10.31□□□□□ -0.76
HMG20A-207ENST00000559035 RNMTO43148 476 aaKnown RBP10.3□□□□□ -0.76
HMG20A-207ENST00000559035 C21orf2O43822 256 aa10.3□□□□□ -0.76
HMG20A-207ENST00000559035 DDNO94850 711 aaPredicted RBP10.3□□□□□ -0.76
HMG20A-207ENST00000559035 CTCFP49711 727 aaPredicted RBP10.3□□□□□ -0.76
HMG20A-207ENST00000559035 VEGFBP49765 207 aa10.3□□□□□ -0.76
HMG20A-207ENST00000559035 LDHDQ86WU2 507 aa10.3□□□□□ -0.76
HMG20A-207ENST00000559035 TAOK3Q9H2K8 898 aa10.3□□□□□ -0.76
HMG20A-207ENST00000559035 LGR6Q9HBX8 967 aa10.3□□□□□ -0.76
HMG20A-207ENST00000559035 PDZRN3Q9UPQ7 1066 aa10.3□□□□□ -0.76
HMG20A-207ENST00000559035 LTBP1Q14766 1721 aa10.3□□□□□ -0.76
HMG20A-207ENST00000559035 TNRC18O15417 2968 aaPredicted RBP10.29□□□□□ -0.76
HMG20A-207ENST00000559035 ITGBL1O95965 494 aaPredicted RBP10.29□□□□□ -0.76
HMG20A-207ENST00000559035 HSPA8P11142 646 aaKnown RBP10.29□□□□□ -0.76
HMG20A-207ENST00000559035 TBC1D9BQ66K14 1250 aa10.29□□□□□ -0.76
HMG20A-207ENST00000559035 TAF1DQ9H5J8 278 aaPredicted RBP10.29□□□□□ -0.76
HMG20A-207ENST00000559035 RASSF10A6NK89 507 aa10.28□□□□□ -0.76
HMG20A-207ENST00000559035 PDE6BP35913 854 aa10.28□□□□□ -0.76
HMG20A-207ENST00000559035 PRPF40BQ6NWY9 871 aaKnown RBP10.28□□□□□ -0.76
HMG20A-207ENST00000559035 C7orf43Q8WVR3 580 aa10.28□□□□□ -0.76
HMG20A-207ENST00000559035 COL3A1P02461 1466 aaPredicted RBP10.28□□□□□ -0.76
HMG20A-207ENST00000559035 ZNF541Q9H0D2 1346 aa10.28□□□□□ -0.76
HMG20A-207ENST00000559035 IQCA1LA6NCM1 817 aa10.27□□□□□ -0.77
HMG20A-207ENST00000559035 TMEM88BA6NKF7 163 aa10.27□□□□□ -0.77
HMG20A-207ENST00000559035 SRGNP10124 158 aa10.27□□□□□ -0.77
HMG20A-207ENST00000559035 LBX1P52954 281 aa10.27□□□□□ -0.77
HMG20A-207ENST00000559035 FAM161AQ3B820 660 aa10.27□□□□□ -0.77
HMG20A-207ENST00000559035 STYK1Q6J9G0 422 aa10.27□□□□□ -0.77
HMG20A-207ENST00000559035 ZNF622Q969S3 477 aaKnown RBP eCLIP10.27□□□□□ -0.771e-7■□□□□ 10
HMG20A-207ENST00000559035 ABHD8Q96I13 439 aa10.27□□□□□ -0.77
HMG20A-207ENST00000559035 COL4A5P29400 1685 aa10.27□□□□□ -0.77
HMG20A-207ENST00000559035 HEG1Q9ULI3 1381 aa10.26□□□□□ -0.77
HMG20A-207ENST00000559035 CAMTA2O94983 1202 aa10.26□□□□□ -0.77
HMG20A-207ENST00000559035 CANXP27824 592 aaKnown RBP10.26□□□□□ -0.77
HMG20A-207ENST00000559035 BICDL1Q6ZP65 573 aa10.26□□□□□ -0.77
HMG20A-207ENST00000559035 AIDAQ96BJ3 306 aa10.26□□□□□ -0.77
HMG20A-207ENST00000559035 ZNF219Q9P2Y4 722 aaPredicted RBP10.26□□□□□ -0.77
HMG20A-207ENST00000559035 A0A087WZG4 1122 aa10.25□□□□□ -0.77
HMG20A-207ENST00000559035 MTHFSDQ2M296 383 aaKnown RBP10.25□□□□□ -0.77
HMG20A-207ENST00000559035 SOGA3Q5TF21 947 aa10.25□□□□□ -0.77
HMG20A-207ENST00000559035 CCDC24Q8N4L8 307 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms