RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 LY75O60449 1722 aa8.47□□□□□ -1.05
CHRNA3-204ENST00000559002 VAMP4O75379 141 aa8.47□□□□□ -1.05
CHRNA3-204ENST00000559002 CYP19A1P11511 503 aaPredicted RBP8.47□□□□□ -1.05
CHRNA3-204ENST00000559002 CRKLP46109 303 aaKnown RBP8.47□□□□□ -1.05
CHRNA3-204ENST00000559002 ZNF428Q96B54 188 aa8.47□□□□□ -1.05
CHRNA3-204ENST00000559002 LRRC4BQ9NT99 713 aa8.47□□□□□ -1.05
CHRNA3-204ENST00000559002 CCDC87Q9NVE4 849 aa8.47□□□□□ -1.05
CHRNA3-204ENST00000559002 ERBB4Q15303 1308 aa8.47□□□□□ -1.05
CHRNA3-204ENST00000559002 CNTNAP4Q9C0A0 1308 aa8.47□□□□□ -1.05
CHRNA3-204ENST00000559002 TJP1Q07157 1748 aa8.46□□□□□ -1.05
CHRNA3-204ENST00000559002 GNPATO15228 680 aa8.46□□□□□ -1.06
CHRNA3-204ENST00000559002 CENPBP07199 599 aaPredicted RBP8.46□□□□□ -1.06
CHRNA3-204ENST00000559002 CANXP27824 592 aaKnown RBP8.46□□□□□ -1.06
CHRNA3-204ENST00000559002 PROM2Q8N271 834 aa8.46□□□□□ -1.06
CHRNA3-204ENST00000559002 SMC4Q9NTJ3 1288 aa8.46□□□□□ -1.06
CHRNA3-204ENST00000559002 CHPF2Q9P2E5 772 aa8.46□□□□□ -1.06
CHRNA3-204ENST00000559002 DBF4Q9UBU7 674 aaPredicted RBP8.46□□□□□ -1.06
CHRNA3-204ENST00000559002 ZBTB1Q9Y2K1 713 aa8.46□□□□□ -1.06
CHRNA3-204ENST00000559002 ZNF330Q9Y3S2 320 aaPredicted RBP8.46□□□□□ -1.06
CHRNA3-204ENST00000559002 CICQ96RK0 1608 aaPredicted RBP8.46□□□□□ -1.06
CHRNA3-204ENST00000559002 C5P01031 1676 aa8.46□□□□□ -1.06
CHRNA3-204ENST00000559002 ZNF831Q5JPB2 1677 aa8.46□□□□□ -1.06
CHRNA3-204ENST00000559002 LAMB4A4D0S4 1761 aa8.45□□□□□ -1.06
CHRNA3-204ENST00000559002 TCERG1O14776 1098 aaKnown RBP8.45□□□□□ -1.06
CHRNA3-204ENST00000559002 A1BGP04217 495 aa8.45□□□□□ -1.06
CHRNA3-204ENST00000559002 MYL6BP14649 208 aa8.45□□□□□ -1.06
CHRNA3-204ENST00000559002 PIP4K2AP48426 406 aaPredicted RBP8.45□□□□□ -1.06
CHRNA3-204ENST00000559002 ALDH1L2Q3SY69 923 aa8.45□□□□□ -1.06
CHRNA3-204ENST00000559002 RC3H1Q5TC82 1133 aaKnown RBP8.45□□□□□ -1.06
CHRNA3-204ENST00000559002 NBPF14Q5TI25 921 aa8.45□□□□□ -1.06
CHRNA3-204ENST00000559002 DDX21Q9NR30 783 aaKnown RBP eCLIP8.45□□□□□ -1.06
CHRNA3-204ENST00000559002 HYPKQ9NX55 129 aa8.45□□□□□ -1.06
CHRNA3-204ENST00000559002 STK32BQ9NY57 414 aa8.45□□□□□ -1.06
CHRNA3-204ENST00000559002 RTCBQ9Y3I0 505 aaKnown RBP8.45□□□□□ -1.06
CHRNA3-204ENST00000559002 ANXA1P04083 346 aa8.44□□□□□ -1.06
CHRNA3-204ENST00000559002 SLC4A2P04920 1241 aa8.44□□□□□ -1.06
CHRNA3-204ENST00000559002 IL6STP40189 918 aaPredicted RBP8.44□□□□□ -1.06
CHRNA3-204ENST00000559002 RARSP54136 660 aaKnown RBP8.44□□□□□ -1.06
CHRNA3-204ENST00000559002 INTS5Q6P9B9 1019 aaKnown RBP8.44□□□□□ -1.06
CHRNA3-204ENST00000559002 SSH1Q8WYL5 1049 aa8.44□□□□□ -1.06
CHRNA3-204ENST00000559002 ARXQ96QS3 562 aa8.44□□□□□ -1.06
CHRNA3-204ENST00000559002 BCL2L13Q9BXK5 485 aa8.44□□□□□ -1.06
CHRNA3-204ENST00000559002 TFCP2L1Q9NZI6 479 aa8.44□□□□□ -1.06
CHRNA3-204ENST00000559002 RCAN3Q9UKA8 241 aa8.44□□□□□ -1.06
CHRNA3-204ENST00000559002 RREB1Q92766 1687 aa8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 C4BP0C0L5 1744 aa8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 COL5A3P25940 1745 aaPredicted RBP8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 A0A087WZG4 1122 aa8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 NBPF26B4DH59 902 aa8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 RPS6KA4O75676 772 aa8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 PHF14O94880 888 aa8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 AIMP1Q12904 312 aaKnown RBP8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 ZNF827Q17R98 1081 aa8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 PROSER3Q2NL68 480 aa8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 NBPF10Q6P3W6 841 aaKnown RBP8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 KIF6Q6ZMV9 814 aa8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 MRPL50Q8N5N7 158 aaKnown RBP8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 NBPF15Q8N660 670 aa8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 KIF16BQ96L93 1317 aa8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 COL15A1P39059 1388 aa8.43□□□□□ -1.06
CHRNA3-204ENST00000559002 DDX58O95786 925 aaKnown RBP8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 ADRA2BP18089 450 aa8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 SSFA2P28290 1259 aa8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 EIF5P55010 431 aaKnown RBP8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 FLIIQ13045 1269 aa8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 PDIA6Q15084 440 aa8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 SLC15A2Q16348 729 aa8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 TRAPPC3LQ5T215 181 aa8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 FLAD1Q8NFF5 587 aa8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 XAGE3Q8WTP9 111 aa8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 AKT1S1Q96B36 256 aa8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 PHAXQ9H814 394 aaKnown RBP8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
CHRNA3-204ENST00000559002 TAF1LQ8IZX4 1826 aa8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 NUP188Q5SRE5 1749 aa8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 SOCS7O14512 581 aa8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 IPO8O15397 1037 aaKnown RBP8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 MSH5O43196 834 aa8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 BCAR3O75815 825 aa8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 RFC4P35249 363 aa8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 FKBP5Q13451 457 aaPredicted RBP8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 COPS6Q7L5N1 327 aa8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 G2E3Q7L622 706 aa8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 DZIP3Q86Y13 1208 aaKnown RBP8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 FRAT1Q92837 279 aaPredicted RBP8.41□□□□□ -1.06
CHRNA3-204ENST00000559002 PTPRCP08575 1304 aa8.4□□□□□ -1.06
CHRNA3-204ENST00000559002 ZPR1O75312 459 aa8.4□□□□□ -1.06
CHRNA3-204ENST00000559002 BRPF1P55201 1214 aaPredicted RBP8.4□□□□□ -1.06
CHRNA3-204ENST00000559002 ZKSCAN2Q63HK3 967 aa8.4□□□□□ -1.06
CHRNA3-204ENST00000559002 TTLL7Q6ZT98 887 aa8.4□□□□□ -1.06
CHRNA3-204ENST00000559002 LRP10Q7Z4F1 713 aa8.4□□□□□ -1.06
CHRNA3-204ENST00000559002 RIC3Q7Z5B4 369 aa8.4□□□□□ -1.06
CHRNA3-204ENST00000559002 ARHGEF1Q92888 912 aaKnown RBP8.4□□□□□ -1.06
CHRNA3-204ENST00000559002 API5Q9BZZ5 524 aaKnown RBP8.4□□□□□ -1.06
CHRNA3-204ENST00000559002 ZBTB3Q9H5J0 574 aa8.4□□□□□ -1.06
CHRNA3-204ENST00000559002 NOB1Q9ULX3 412 aaKnown RBP8.4□□□□□ -1.06
CHRNA3-204ENST00000559002 TBC1D2BQ9UPU7 963 aa8.4□□□□□ -1.06
CHRNA3-204ENST00000559002 MAP3K15Q6ZN16 1313 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms