RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 ZNF530Q6P9A1 599 aaPredicted RBP16.38■□□□□ 0.21
CPNE6-210ENST00000558995 CADPS2Q86UW7 1296 aa16.38■□□□□ 0.21
CPNE6-210ENST00000558995 MPRIPQ6WCQ1 1025 aa16.38■□□□□ 0.21
CPNE6-210ENST00000558995 CEMIPQ8WUJ3 1361 aa16.38■□□□□ 0.21
CPNE6-210ENST00000558995 MED1Q15648 1581 aaPredicted RBP16.38■□□□□ 0.21
CPNE6-210ENST00000558995 PNMA6EA0A0J9YXQ4 647 aa16.37■□□□□ 0.21
CPNE6-210ENST00000558995 CYP2E1P05181 493 aaPredicted RBP16.37■□□□□ 0.21
CPNE6-210ENST00000558995 DCCP43146 1447 aa16.37■□□□□ 0.21
CPNE6-210ENST00000558995 IBTKQ9P2D0 1353 aaPredicted RBP16.36■□□□□ 0.21
CPNE6-210ENST00000558995 PXDNQ92626 1479 aa16.36■□□□□ 0.21
CPNE6-210ENST00000558995 MX1P20591 662 aa16.36■□□□□ 0.21
CPNE6-210ENST00000558995 ERBB3P21860 1342 aa16.36■□□□□ 0.21
CPNE6-210ENST00000558995 KCNQ3O43525 872 aa16.36■□□□□ 0.21
CPNE6-210ENST00000558995 KLHL40Q2TBA0 621 aa16.36■□□□□ 0.21
CPNE6-210ENST00000558995 PLEKHO1Q53GL0 409 aaPredicted RBP16.35■□□□□ 0.21
CPNE6-210ENST00000558995 GAS2L3Q86XJ1 694 aa16.35■□□□□ 0.21
CPNE6-210ENST00000558995 SRCIN1Q9C0H9 1055 aa16.35■□□□□ 0.21
CPNE6-210ENST00000558995 STAP2Q9UGK3 403 aa16.35■□□□□ 0.21
CPNE6-210ENST00000558995 ALS2Q96Q42 1657 aa16.35■□□□□ 0.21
CPNE6-210ENST00000558995 NPHP3Q7Z494 1330 aa16.35■□□□□ 0.21
CPNE6-210ENST00000558995 USP44Q9H0E7 712 aa16.35■□□□□ 0.21
CPNE6-210ENST00000558995 LRRFIP2Q9Y608 721 aaKnown RBP16.35■□□□□ 0.21
CPNE6-210ENST00000558995 PXDNLA1KZ92 1463 aa16.35■□□□□ 0.21
CPNE6-210ENST00000558995 LMTK3Q96Q04 1460 aa16.34■□□□□ 0.21
CPNE6-210ENST00000558995 AKAP4Q5JQC9 854 aa16.34■□□□□ 0.21
CPNE6-210ENST00000558995 ESYT1Q9BSJ8 1104 aa16.34■□□□□ 0.21
CPNE6-210ENST00000558995 CHRNA2Q15822 529 aa16.34■□□□□ 0.21
CPNE6-210ENST00000558995 FAM208AQ9UK61 1670 aaKnown RBP16.34■□□□□ 0.21
CPNE6-210ENST00000558995 UBTFL1P0CB47 393 aaPredicted RBP16.33■□□□□ 0.21
CPNE6-210ENST00000558995 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.21
CPNE6-210ENST00000558995 DDX49Q9Y6V7 483 aaKnown RBP16.33■□□□□ 0.21
CPNE6-210ENST00000558995 NCAPD2Q15021 1401 aa16.33■□□□□ 0.21
CPNE6-210ENST00000558995 ZNF335Q9H4Z2 1342 aaPredicted RBP16.33■□□□□ 0.21
CPNE6-210ENST00000558995 TEFQ10587 303 aa16.33■□□□□ 0.2
CPNE6-210ENST00000558995 TSHZ3Q63HK5 1081 aa16.33■□□□□ 0.2
CPNE6-210ENST00000558995 AMOTQ4VCS5 1084 aa16.32■□□□□ 0.2
CPNE6-210ENST00000558995 RGPD5Q99666 1765 aa16.32■□□□□ 0.2
CPNE6-210ENST00000558995 EIF2S2P20042 333 aaKnown RBP16.32■□□□□ 0.2
CPNE6-210ENST00000558995 MCM2P49736 904 aa16.32■□□□□ 0.2
CPNE6-210ENST00000558995 C1orf141Q5JVX7 400 aa16.32■□□□□ 0.2
CPNE6-210ENST00000558995 NLRP2Q9NX02 1062 aa16.32■□□□□ 0.2
CPNE6-210ENST00000558995 AOX1Q06278 1338 aa16.32■□□□□ 0.2
CPNE6-210ENST00000558995 MCCP23508 829 aa16.32■□□□□ 0.2
CPNE6-210ENST00000558995 CHMLP26374 656 aa16.32■□□□□ 0.2
CPNE6-210ENST00000558995 EIF4A1P60842 406 aaKnown RBP16.32■□□□□ 0.2
CPNE6-210ENST00000558995 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
CPNE6-210ENST00000558995 ZGPATQ8N5A5 531 aaKnown RBP16.32■□□□□ 0.2
CPNE6-210ENST00000558995 SSH3Q8TE77 659 aa16.32■□□□□ 0.2
CPNE6-210ENST00000558995 BTBD11A6QL63 1104 aa16.31■□□□□ 0.2
CPNE6-210ENST00000558995 BRINP3Q76B58 766 aa16.31■□□□□ 0.2
CPNE6-210ENST00000558995 RNMTO43148 476 aaKnown RBP16.31■□□□□ 0.2
CPNE6-210ENST00000558995 NEK4P51957 841 aa16.31■□□□□ 0.2
CPNE6-210ENST00000558995 ANAPC15P60006 121 aa16.31■□□□□ 0.2
CPNE6-210ENST00000558995 PKP1Q13835 747 aa16.31■□□□□ 0.2
CPNE6-210ENST00000558995 PHAXQ9H814 394 aaKnown RBP16.31■□□□□ 0.2
CPNE6-210ENST00000558995 TNS3Q68CZ2 1445 aa16.3■□□□□ 0.2
CPNE6-210ENST00000558995 TRIM6-TRIM34B2RNG4 842 aa16.3■□□□□ 0.2
CPNE6-210ENST00000558995 RAB11FIP3O75154 756 aa16.3■□□□□ 0.2
CPNE6-210ENST00000558995 RILPL2Q969X0 211 aa16.3■□□□□ 0.2
CPNE6-210ENST00000558995 SPATA31A3Q5VYP0 1347 aa16.3■□□□□ 0.2
CPNE6-210ENST00000558995 HOXB7P09629 217 aa16.3■□□□□ 0.2
CPNE6-210ENST00000558995 LMBRD1Q9NUN5 540 aa16.3■□□□□ 0.2
CPNE6-210ENST00000558995 STRCQ7RTU9 1775 aa16.29■□□□□ 0.2
CPNE6-210ENST00000558995 CACNA1FO60840 1977 aa16.28■□□□□ 0.2
CPNE6-210ENST00000558995 CSB-PGBD3P0DP91 1061 aa16.28■□□□□ 0.2
CPNE6-210ENST00000558995 IL17RAQ96F46 866 aa16.28■□□□□ 0.2
CPNE6-210ENST00000558995 TMX3Q96JJ7 454 aa16.28■□□□□ 0.2
CPNE6-210ENST00000558995 XIRP1Q702N8 1843 aaKnown RBP16.28■□□□□ 0.2
CPNE6-210ENST00000558995 EPB41L2O43491 1005 aaKnown RBP16.28■□□□□ 0.2
CPNE6-210ENST00000558995 ANXA1P04083 346 aa16.28■□□□□ 0.2
CPNE6-210ENST00000558995 CLCN1P35523 988 aa16.28■□□□□ 0.2
CPNE6-210ENST00000558995 POLA2Q14181 598 aa16.28■□□□□ 0.2
CPNE6-210ENST00000558995 ANO2Q9NQ90 1003 aa16.28■□□□□ 0.2
CPNE6-210ENST00000558995 ZDHHC9Q9Y397 364 aa16.28■□□□□ 0.2
CPNE6-210ENST00000558995 PPP1R42Q7Z4L9 355 aa16.27■□□□□ 0.2
CPNE6-210ENST00000558995 LMO7Q8WWI1 1683 aa16.27■□□□□ 0.2
CPNE6-210ENST00000558995 RAPGEF4Q8WZA2 1011 aa16.27■□□□□ 0.2
CPNE6-210ENST00000558995 CHPF2Q9P2E5 772 aa16.27■□□□□ 0.2
CPNE6-210ENST00000558995 ZNF445P59923 1031 aa16.26■□□□□ 0.19
CPNE6-210ENST00000558995 PDCL3Q9H2J4 239 aa16.26■□□□□ 0.19
CPNE6-210ENST00000558995 CAMTA1Q9Y6Y1 1673 aa16.26■□□□□ 0.19
CPNE6-210ENST00000558995 N4BP2Q86UW6 1770 aaPredicted RBP16.26■□□□□ 0.19
CPNE6-210ENST00000558995 SURF6O75683 361 aaKnown RBP16.26■□□□□ 0.19
CPNE6-210ENST00000558995 CUL4AQ13619 759 aa16.26■□□□□ 0.19
CPNE6-210ENST00000558995 UNC5CLQ8IV45 518 aa16.26■□□□□ 0.19
CPNE6-210ENST00000558995 ZFP91Q96JP5 570 aaPredicted RBP16.26■□□□□ 0.19
CPNE6-210ENST00000558995 IL1RAPL2Q9NP60 686 aa16.26■□□□□ 0.19
CPNE6-210ENST00000558995 PALD1Q9ULE6 856 aa16.26■□□□□ 0.19
CPNE6-210ENST00000558995 PRAMEF22A3QJZ6 481 aa16.26■□□□□ 0.19
CPNE6-210ENST00000558995 SLAIN2Q9P270 581 aa16.26■□□□□ 0.19
CPNE6-210ENST00000558995 BEND3Q5T5X7 828 aa16.25■□□□□ 0.19
CPNE6-210ENST00000558995 RHPN1Q8TCX5 695 aa16.25■□□□□ 0.19
CPNE6-210ENST00000558995 DNAAF4Q8WXU2 420 aa16.25■□□□□ 0.19
CPNE6-210ENST00000558995 TRIM44Q96DX7 344 aaPredicted RBP16.25■□□□□ 0.19
CPNE6-210ENST00000558995 INTS4Q96HW7 963 aaKnown RBP16.25■□□□□ 0.19
CPNE6-210ENST00000558995 MEGF6O75095 1541 aa16.25■□□□□ 0.19
CPNE6-210ENST00000558995 PRPF40AO75400 957 aaKnown RBP16.24■□□□□ 0.19
CPNE6-210ENST00000558995 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
CPNE6-210ENST00000558995 NUTM1Q86Y26 1132 aa16.24■□□□□ 0.19
CPNE6-210ENST00000558995 KIF1BPQ96EK5 621 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms