RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 KIAA2012Q0VF49 1180 aa14.65□□□□□ -0.06
SEC11A-206ENST00000558924 ATP2B3Q16720 1220 aa14.65□□□□□ -0.06
SEC11A-206ENST00000558924 KLHL40Q2TBA0 621 aa14.65□□□□□ -0.06
SEC11A-206ENST00000558924 USP25Q9UHP3 1055 aa14.65□□□□□ -0.06
SEC11A-206ENST00000558924 DDIT3P35638 169 aa14.65□□□□□ -0.06
SEC11A-206ENST00000558924 CWF19L2Q2TBE0 894 aaKnown RBP14.65□□□□□ -0.06
SEC11A-206ENST00000558924 RTL1A6NKG5 1358 aa14.64□□□□□ -0.07
SEC11A-206ENST00000558924 CPA1P15085 419 aa14.64□□□□□ -0.07
SEC11A-206ENST00000558924 MAP7D2Q96T17 732 aa14.64□□□□□ -0.07
SEC11A-206ENST00000558924 KIF2CQ99661 725 aa14.64□□□□□ -0.07
SEC11A-206ENST00000558924 ATP7BP35670 1465 aa14.64□□□□□ -0.07
SEC11A-206ENST00000558924 VPS37CA5D8V6 355 aaPredicted RBP14.64□□□□□ -0.07
SEC11A-206ENST00000558924 UNC5CLQ8IV45 518 aa14.64□□□□□ -0.07
SEC11A-206ENST00000558924 NOL7Q9UMY1 257 aaKnown RBP14.64□□□□□ -0.07
SEC11A-206ENST00000558924 PTPRCP08575 1304 aa14.64□□□□□ -0.07
SEC11A-206ENST00000558924 SNX21Q969T3 373 aa14.64□□□□□ -0.07
SEC11A-206ENST00000558924 USP26Q9BXU7 913 aa14.64□□□□□ -0.07
SEC11A-206ENST00000558924 TTC12Q9H892 705 aaPredicted RBP14.64□□□□□ -0.07
SEC11A-206ENST00000558924 CPSF1Q10570 1443 aaKnown RBP14.63□□□□□ -0.07
SEC11A-206ENST00000558924 RIC3Q7Z5B4 369 aa14.63□□□□□ -0.07
SEC11A-206ENST00000558924 PPFIA3O75145 1194 aa14.62□□□□□ -0.07
SEC11A-206ENST00000558924 TMEM63CQ9P1W3 806 aa14.62□□□□□ -0.07
SEC11A-206ENST00000558924 ISY1Q9ULR0 285 aaKnown RBP14.62□□□□□ -0.07
SEC11A-206ENST00000558924 KLHDC4Q8TBB5 520 aa14.62□□□□□ -0.07
SEC11A-206ENST00000558924 CCDC94Q9BW85 323 aaPredicted RBP14.62□□□□□ -0.07
SEC11A-206ENST00000558924 CCDC8Q9H0W5 538 aaPredicted RBP14.62□□□□□ -0.07
SEC11A-206ENST00000558924 USP6P35125 1406 aa14.62□□□□□ -0.07
SEC11A-206ENST00000558924 PIK3R4Q99570 1358 aa14.62□□□□□ -0.07
SEC11A-206ENST00000558924 DIAPH3Q9NSV4 1193 aa14.62□□□□□ -0.07
SEC11A-206ENST00000558924 IFIT2P09913 472 aaKnown RBP14.61□□□□□ -0.07
SEC11A-206ENST00000558924 PTMSP20962 102 aa14.61□□□□□ -0.07
SEC11A-206ENST00000558924 FERMT3Q86UX7 667 aa14.61□□□□□ -0.07
SEC11A-206ENST00000558924 ZNF710Q8N1W2 664 aa14.61□□□□□ -0.07
SEC11A-206ENST00000558924 TCEANC2Q96MN5 208 aa14.61□□□□□ -0.07
SEC11A-206ENST00000558924 PALD1Q9ULE6 856 aa14.61□□□□□ -0.07
SEC11A-206ENST00000558924 RICTORQ6R327 1708 aa14.61□□□□□ -0.07
SEC11A-206ENST00000558924 RAPGEF4Q8WZA2 1011 aa14.61□□□□□ -0.07
SEC11A-206ENST00000558924 TMX3Q96JJ7 454 aa14.61□□□□□ -0.07
SEC11A-206ENST00000558924 CCDC85AQ96PX6 553 aaPredicted RBP14.61□□□□□ -0.07
SEC11A-206ENST00000558924 TBX22Q9Y458 520 aa14.61□□□□□ -0.07
SEC11A-206ENST00000558924 DYNC1I1O14576 645 aa14.6□□□□□ -0.07
SEC11A-206ENST00000558924 GPT2Q8TD30 523 aa14.6□□□□□ -0.07
SEC11A-206ENST00000558924 ZKSCAN5Q9Y2L8 839 aa14.6□□□□□ -0.07
SEC11A-206ENST00000558924 MAP3K2Q9Y2U5 619 aa14.6□□□□□ -0.07
SEC11A-206ENST00000558924 AATKQ6ZMQ8 1374 aa14.6□□□□□ -0.07
SEC11A-206ENST00000558924 PLEKHO1Q53GL0 409 aaPredicted RBP14.6□□□□□ -0.07
SEC11A-206ENST00000558924 ZNF592Q92610 1267 aa14.6□□□□□ -0.07
SEC11A-206ENST00000558924 LMBRD1Q9NUN5 540 aa14.6□□□□□ -0.07
SEC11A-206ENST00000558924 AK9Q5TCS8 1911 aa14.6□□□□□ -0.07
SEC11A-206ENST00000558924 DNAAF4Q8WXU2 420 aa14.6□□□□□ -0.07
SEC11A-206ENST00000558924 USP44Q9H0E7 712 aa14.6□□□□□ -0.07
SEC11A-206ENST00000558924 CGNQ9P2M7 1197 aaKnown RBP14.6□□□□□ -0.07
SEC11A-206ENST00000558924 GADD45BO75293 160 aaPredicted RBP14.59□□□□□ -0.07
SEC11A-206ENST00000558924 NCBP3Q53F19 620 aaKnown RBP14.59□□□□□ -0.07
SEC11A-206ENST00000558924 HCLS1P14317 486 aaPredicted RBP14.59□□□□□ -0.07
SEC11A-206ENST00000558924 PROSER3Q2NL68 480 aa14.59□□□□□ -0.07
SEC11A-206ENST00000558924 NDUFB9Q9Y6M9 179 aa14.59□□□□□ -0.07
SEC11A-206ENST00000558924 GOLGA6L4A6NEF3 574 aa14.59□□□□□ -0.07
SEC11A-206ENST00000558924 ZNF500O60304 480 aaPredicted RBP14.59□□□□□ -0.07
SEC11A-206ENST00000558924 CAMK4Q16566 473 aa14.59□□□□□ -0.07
SEC11A-206ENST00000558924 ANKRD24Q8TF21 1146 aa14.59□□□□□ -0.07
SEC11A-206ENST00000558924 TSPY26PQ9H489 355 aa14.59□□□□□ -0.07
SEC11A-206ENST00000558924 CDK12Q9NYV4 1490 aaPredicted RBP14.58□□□□□ -0.07
SEC11A-206ENST00000558924 TTC21AQ8NDW8 1320 aa14.58□□□□□ -0.07
SEC11A-206ENST00000558924 ATP5J2-PTCD1G3V325 749 aa14.58□□□□□ -0.08
SEC11A-206ENST00000558924 NPHP1O15259 732 aa14.58□□□□□ -0.08
SEC11A-206ENST00000558924 PTCD1O75127 700 aaKnown RBP14.58□□□□□ -0.08
SEC11A-206ENST00000558924 GCP02774 474 aa14.58□□□□□ -0.08
SEC11A-206ENST00000558924 SASS6Q6UVJ0 657 aa14.58□□□□□ -0.08
SEC11A-206ENST00000558924 AACSQ86V21 672 aa14.58□□□□□ -0.08
SEC11A-206ENST00000558924 SBNO1A3KN83 1393 aa14.58□□□□□ -0.08
SEC11A-206ENST00000558924 CLASRPQ8N2M8 674 aaKnown RBP14.58□□□□□ -0.08
SEC11A-206ENST00000558924 BOLA2Q9H3K6 86 aa14.58□□□□□ -0.08
SEC11A-206ENST00000558924 TMEM51Q9NW97 253 aa14.58□□□□□ -0.08
SEC11A-206ENST00000558924 PDIA4P13667 645 aaKnown RBP14.57□□□□□ -0.08
SEC11A-206ENST00000558924 ATP8B2P98198 1209 aa14.57□□□□□ -0.08
SEC11A-206ENST00000558924 RHPN1Q8TCX5 695 aa14.57□□□□□ -0.08
SEC11A-206ENST00000558924 NEURL4Q96JN8 1562 aa14.57□□□□□ -0.08
SEC11A-206ENST00000558924 CEBPZQ03701 1054 aaKnown RBP14.56□□□□□ -0.08
SEC11A-206ENST00000558924 STK3Q13188 491 aa14.56□□□□□ -0.08
SEC11A-206ENST00000558924 G3BP1Q13283 466 aaKnown RBP eCLIP14.56□□□□□ -0.08
SEC11A-206ENST00000558924 SYAP1Q96A49 352 aaPredicted RBP14.56□□□□□ -0.08
SEC11A-206ENST00000558924 ESYT1Q9BSJ8 1104 aa14.56□□□□□ -0.08
SEC11A-206ENST00000558924 PTCH1Q13635 1447 aa14.56□□□□□ -0.08
SEC11A-206ENST00000558924 PTPRUQ92729 1446 aa14.56□□□□□ -0.08
SEC11A-206ENST00000558924 GIMAP6Q6P9H5 292 aa14.56□□□□□ -0.08
SEC11A-206ENST00000558924 BRPF1P55201 1214 aaPredicted RBP14.55□□□□□ -0.08
SEC11A-206ENST00000558924 KRT28Q7Z3Y7 464 aa14.55□□□□□ -0.08
SEC11A-206ENST00000558924 TTC5Q8N0Z6 440 aa14.55□□□□□ -0.08
SEC11A-206ENST00000558924 MAP3K5Q99683 1374 aa14.55□□□□□ -0.08
SEC11A-206ENST00000558924 STRN4Q9NRL3 753 aa14.55□□□□□ -0.08
SEC11A-206ENST00000558924 VIRMAQ69YN4 1812 aaKnown RBP14.55□□□□□ -0.08
SEC11A-206ENST00000558924 ADAMTS13Q76LX8 1427 aa14.55□□□□□ -0.08
SEC11A-206ENST00000558924 U2AF2P26368 475 aaKnown RBP eCLIP14.55□□□□□ -0.08
SEC11A-206ENST00000558924 TERF1P54274 439 aa14.55□□□□□ -0.08
SEC11A-206ENST00000558924 NFATC2IPQ8NCF5 419 aa14.55□□□□□ -0.08
SEC11A-206ENST00000558924 DNAJC2Q99543 621 aaKnown RBP14.55□□□□□ -0.08
SEC11A-206ENST00000558924 CCDC39Q9UFE4 941 aa14.55□□□□□ -0.08
SEC11A-206ENST00000558924 CNPY2Q9Y2B0 182 aa14.55□□□□□ -0.08
SEC11A-206ENST00000558924 NEUROD6Q96NK8 337 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms