RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 AATKQ6ZMQ8 1374 aa9.88□□□□□ -0.83
TRAF3-206ENST00000558880 GLI3P10071 1580 aa9.88□□□□□ -0.83
TRAF3-206ENST00000558880 NBPF26B4DH59 902 aa9.88□□□□□ -0.83
TRAF3-206ENST00000558880 GPR37O15354 613 aa9.88□□□□□ -0.83
TRAF3-206ENST00000558880 R3HDM1Q15032 1099 aaKnown RBP9.88□□□□□ -0.83
TRAF3-206ENST00000558880 ARHGEF25Q86VW2 580 aa9.88□□□□□ -0.83
TRAF3-206ENST00000558880 NLRP13Q86W25 1043 aa9.88□□□□□ -0.83
TRAF3-206ENST00000558880 TTC13Q8NBP0 860 aa9.88□□□□□ -0.83
TRAF3-206ENST00000558880 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
TRAF3-206ENST00000558880 SMG6Q86US8 1419 aaKnown RBP9.88□□□□□ -0.83
TRAF3-206ENST00000558880 MAP3K19Q56UN5 1328 aa9.87□□□□□ -0.83
TRAF3-206ENST00000558880 PPP2R1AP30153 589 aa9.87□□□□□ -0.83
TRAF3-206ENST00000558880 DIEXFQ68CQ4 756 aaKnown RBP9.87□□□□□ -0.83
TRAF3-206ENST00000558880 UNC5CLQ8IV45 518 aa9.87□□□□□ -0.83
TRAF3-206ENST00000558880 COG3Q96JB2 828 aa9.87□□□□□ -0.83
TRAF3-206ENST00000558880 ZFRQ96KR1 1074 aaKnown RBP9.87□□□□□ -0.83
TRAF3-206ENST00000558880 EMILIN1Q9Y6C2 1016 aa9.87□□□□□ -0.83
TRAF3-206ENST00000558880 FECHP22830 423 aa9.86□□□□□ -0.83
TRAF3-206ENST00000558880 CNGB1Q14028 1251 aaPredicted RBP9.86□□□□□ -0.83
TRAF3-206ENST00000558880 RRS1Q15050 365 aaKnown RBP9.86□□□□□ -0.83
TRAF3-206ENST00000558880 FAM98CQ17RN3 349 aaKnown RBP9.86□□□□□ -0.83
TRAF3-206ENST00000558880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRAF3-206ENST00000558880 KRT27Q7Z3Y8 459 aa9.86□□□□□ -0.83
TRAF3-206ENST00000558880 CPDO75976 1380 aa9.86□□□□□ -0.83
TRAF3-206ENST00000558880 COL3A1P02461 1466 aaPredicted RBP9.85□□□□□ -0.83
TRAF3-206ENST00000558880 FAM83GA6ND36 823 aa9.85□□□□□ -0.83
TRAF3-206ENST00000558880 PTPN5P54829 565 aa9.85□□□□□ -0.83
TRAF3-206ENST00000558880 HIC1Q14526 733 aa9.85□□□□□ -0.83
TRAF3-206ENST00000558880 LMOD2Q6P5Q4 547 aa9.85□□□□□ -0.83
TRAF3-206ENST00000558880 MORC1Q86VD1 984 aa9.85□□□□□ -0.83
TRAF3-206ENST00000558880 LAPTM4BQ86VI4 370 aa9.85□□□□□ -0.83
TRAF3-206ENST00000558880 INSRP06213 1382 aa9.85□□□□□ -0.83
TRAF3-206ENST00000558880 KIAA0232Q92628 1395 aa9.85□□□□□ -0.83
TRAF3-206ENST00000558880 PHRF1Q9P1Y6 1649 aaKnown RBP9.85□□□□□ -0.83
TRAF3-206ENST00000558880 ABCA3Q99758 1704 aa9.85□□□□□ -0.83
TRAF3-206ENST00000558880 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.85□□□□□ -0.83
TRAF3-206ENST00000558880 PEAK1Q9H792 1746 aa9.85□□□□□ -0.83
TRAF3-206ENST00000558880 TNNT2P45379 298 aaPredicted RBP9.84□□□□□ -0.83
TRAF3-206ENST00000558880 BCAMP50895 628 aa9.84□□□□□ -0.83
TRAF3-206ENST00000558880 RALBP1Q15311 655 aa9.84□□□□□ -0.83
TRAF3-206ENST00000558880 ANKK1Q8NFD2 765 aa9.84□□□□□ -0.83
TRAF3-206ENST00000558880 KIF20BQ96Q89 1820 aa9.84□□□□□ -0.83
TRAF3-206ENST00000558880 ANKRD26Q9UPS8 1709 aa9.83□□□□□ -0.84
TRAF3-206ENST00000558880 SENP3-EIF4A1A0A087X0R7 540 aa9.83□□□□□ -0.84
TRAF3-206ENST00000558880 GNPATO15228 680 aa9.83□□□□□ -0.84
TRAF3-206ENST00000558880 MTHFSP49914 203 aa9.83□□□□□ -0.84
TRAF3-206ENST00000558880 ZC3H6P61129 1189 aaKnown RBP9.83□□□□□ -0.84
TRAF3-206ENST00000558880 HSP90AB2PQ58FF8 381 aa9.83□□□□□ -0.84
TRAF3-206ENST00000558880 THSD4Q6ZMP0 1018 aa9.83□□□□□ -0.84
TRAF3-206ENST00000558880 COL18A1P39060 1754 aa9.83□□□□□ -0.84
TRAF3-206ENST00000558880 HOXC9P31274 260 aa9.82□□□□□ -0.84
TRAF3-206ENST00000558880 CHRNA2Q15822 529 aa9.82□□□□□ -0.84
TRAF3-206ENST00000558880 FAM182BQ5T319 152 aa9.82□□□□□ -0.84
TRAF3-206ENST00000558880 KCNH5Q8NCM2 988 aa9.82□□□□□ -0.84
TRAF3-206ENST00000558880 ADGRG1Q9Y653 693 aa9.82□□□□□ -0.84
TRAF3-206ENST00000558880 CAMTA1Q9Y6Y1 1673 aa9.82□□□□□ -0.84
TRAF3-206ENST00000558880 SLIT2O94813 1529 aa9.82□□□□□ -0.84
TRAF3-206ENST00000558880 MYBBP1AQ9BQG0 1328 aaKnown RBP9.82□□□□□ -0.84
TRAF3-206ENST00000558880 LMO7Q8WWI1 1683 aa9.81□□□□□ -0.84
TRAF3-206ENST00000558880 IP6K1Q92551 441 aa9.81□□□□□ -0.84
TRAF3-206ENST00000558880 KIF24Q5T7B8 1368 aa9.8□□□□□ -0.84
TRAF3-206ENST00000558880 IL13P35225 146 aa9.8□□□□□ -0.84
TRAF3-206ENST00000558880 VPS72Q15906 364 aa9.8□□□□□ -0.84
TRAF3-206ENST00000558880 SAMD7Q7Z3H4 446 aa9.8□□□□□ -0.84
TRAF3-206ENST00000558880 EYA1Q99502 592 aa9.8□□□□□ -0.84
TRAF3-206ENST00000558880 RTL1A6NKG5 1358 aa9.79□□□□□ -0.84
TRAF3-206ENST00000558880 ANP32CO43423 234 aa9.79□□□□□ -0.84
TRAF3-206ENST00000558880 EIF4A2Q14240 407 aaKnown RBP9.79□□□□□ -0.84
TRAF3-206ENST00000558880 EZH2Q15910 746 aaKnown RBP9.79□□□□□ -0.84
TRAF3-206ENST00000558880 LRCH3Q96II8 777 aa9.79□□□□□ -0.84
TRAF3-206ENST00000558880 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-206ENST00000558880 HCSTQ9UBK5 93 aa9.79□□□□□ -0.84
TRAF3-206ENST00000558880 PPP1R1BQ9UD71 204 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-206ENST00000558880 RGPD1P0DJD0 1748 aa9.79□□□□□ -0.84
TRAF3-206ENST00000558880 FLT4P35916 1363 aa9.78□□□□□ -0.84
TRAF3-206ENST00000558880 SOWAHBA6NEL2 793 aa9.78□□□□□ -0.84
TRAF3-206ENST00000558880 RNF40O75150 1001 aa9.78□□□□□ -0.84
TRAF3-206ENST00000558880 RBM46Q8TBY0 533 aaKnown RBP9.78□□□□□ -0.84
TRAF3-206ENST00000558880 NCAPD2Q15021 1401 aa9.78□□□□□ -0.84
TRAF3-206ENST00000558880 COL5A2P05997 1499 aaPredicted RBP9.78□□□□□ -0.84
TRAF3-206ENST00000558880 ABCC6O95255 1503 aa9.77□□□□□ -0.84
TRAF3-206ENST00000558880 NBPF6Q5VWK0 638 aa9.77□□□□□ -0.85
TRAF3-206ENST00000558880 PNISRQ8TF01 805 aaKnown RBP9.77□□□□□ -0.85
TRAF3-206ENST00000558880 NBPF4Q96M43 638 aa9.77□□□□□ -0.85
TRAF3-206ENST00000558880 PRDM11Q9NQV5 511 aa9.77□□□□□ -0.85
TRAF3-206ENST00000558880 SWT1Q5T5J6 900 aaKnown RBP9.76□□□□□ -0.85
TRAF3-206ENST00000558880 ZNF784Q8NCA9 323 aaPredicted RBP9.76□□□□□ -0.85
TRAF3-206ENST00000558880 BTG4Q9NY30 223 aa9.76□□□□□ -0.85
TRAF3-206ENST00000558880 HPS5Q9UPZ3 1129 aa9.76□□□□□ -0.85
TRAF3-206ENST00000558880 PLCH1Q4KWH8 1693 aa9.76□□□□□ -0.85
TRAF3-206ENST00000558880 IGSF1Q8N6C5 1336 aa9.76□□□□□ -0.85
TRAF3-206ENST00000558880 RCCD1A6NED2 376 aa9.75□□□□□ -0.85
TRAF3-206ENST00000558880 CCER2I3L3R5 266 aa9.75□□□□□ -0.85
TRAF3-206ENST00000558880 PPM1GO15355 546 aaPredicted RBP9.75□□□□□ -0.85
TRAF3-206ENST00000558880 AMPHP49418 695 aa9.75□□□□□ -0.85
TRAF3-206ENST00000558880 LARP1Q6PKG0 1096 aaKnown RBP9.75□□□□□ -0.85
TRAF3-206ENST00000558880 AEBP1Q8IUX7 1158 aa9.75□□□□□ -0.85
TRAF3-206ENST00000558880 ANKRD24Q8TF21 1146 aa9.75□□□□□ -0.85
TRAF3-206ENST00000558880 NLRP7Q8WX94 980 aa9.75□□□□□ -0.85
TRAF3-206ENST00000558880 WBP1LQ9NX94 342 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms