RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 FKBP8Q14318 412 aa17.94■□□□□ 0.46
TMED3-205ENST00000558562 PNISRQ8TF01 805 aaKnown RBP17.94■□□□□ 0.46
TMED3-205ENST00000558562 KDM6AO15550 1401 aaPredicted RBP17.92■□□□□ 0.46
TMED3-205ENST00000558562 CRKLP46109 303 aaKnown RBP17.92■□□□□ 0.46
TMED3-205ENST00000558562 TNS4Q8IZW8 715 aa17.92■□□□□ 0.46
TMED3-205ENST00000558562 HSP90AB1P08238 724 aaKnown RBP17.91■□□□□ 0.46
TMED3-205ENST00000558562 ZNF530Q6P9A1 599 aaPredicted RBP17.91■□□□□ 0.46
TMED3-205ENST00000558562 USP42Q9H9J4 1324 aaKnown RBP17.91■□□□□ 0.46
TMED3-205ENST00000558562 SBF1O95248 1867 aa17.9■□□□□ 0.46
TMED3-205ENST00000558562 PLEKHO1Q53GL0 409 aaPredicted RBP17.9■□□□□ 0.46
TMED3-205ENST00000558562 MORC1Q86VD1 984 aa17.9■□□□□ 0.46
TMED3-205ENST00000558562 RASSF7Q02833 373 aa17.89■□□□□ 0.45
TMED3-205ENST00000558562 SMC1BQ8NDV3 1235 aa17.89■□□□□ 0.45
TMED3-205ENST00000558562 TNRC6CQ9HCJ0 1690 aaKnown RBP17.89■□□□□ 0.45
TMED3-205ENST00000558562 MTHFSP49914 203 aa17.88■□□□□ 0.45
TMED3-205ENST00000558562 NFATC2IPQ8NCF5 419 aa17.88■□□□□ 0.45
TMED3-205ENST00000558562 POLRMTO00411 1230 aaKnown RBP17.87■□□□□ 0.45
TMED3-205ENST00000558562 PRELPP51888 382 aa17.86■□□□□ 0.45
TMED3-205ENST00000558562 INTS5Q6P9B9 1019 aaKnown RBP17.86■□□□□ 0.45
TMED3-205ENST00000558562 AEBP1Q8IUX7 1158 aa17.86■□□□□ 0.45
TMED3-205ENST00000558562 ZBED9Q6R2W3 1325 aa17.86■□□□□ 0.45
TMED3-205ENST00000558562 TJP1Q07157 1748 aa17.86■□□□□ 0.45
TMED3-205ENST00000558562 TM4SF1P30408 202 aa17.85■□□□□ 0.45
TMED3-205ENST00000558562 C1orf141Q5JVX7 400 aa17.85■□□□□ 0.45
TMED3-205ENST00000558562 USPL1Q5W0Q7 1092 aa17.85■□□□□ 0.45
TMED3-205ENST00000558562 AMOTQ4VCS5 1084 aa17.84■□□□□ 0.45
TMED3-205ENST00000558562 ZPR1O75312 459 aa17.83■□□□□ 0.44
TMED3-205ENST00000558562 HSPA1AP0DMV8 641 aaKnown RBP17.83■□□□□ 0.44
TMED3-205ENST00000558562 HSPA1BP0DMV9 641 aaKnown RBP17.83■□□□□ 0.44
TMED3-205ENST00000558562 ADAMTS7Q9UKP4 1686 aa17.83■□□□□ 0.44
TMED3-205ENST00000558562 GLTPD2A6NH11 291 aa17.82■□□□□ 0.44
TMED3-205ENST00000558562 VEGFAP15692 232 aaPredicted RBP17.82■□□□□ 0.44
TMED3-205ENST00000558562 LMNB1P20700 586 aa17.82■□□□□ 0.44
TMED3-205ENST00000558562 DNAJC10Q8IXB1 793 aa17.82■□□□□ 0.44
TMED3-205ENST00000558562 NFIXQ14938 502 aa17.81■□□□□ 0.44
TMED3-205ENST00000558562 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.44
TMED3-205ENST00000558562 ZC3H4Q9UPT8 1303 aaKnown RBP17.8■□□□□ 0.44
TMED3-205ENST00000558562 AFDNP55196 1824 aaKnown RBP17.8■□□□□ 0.44
TMED3-205ENST00000558562 SOS1Q07889 1333 aaPredicted RBP17.79■□□□□ 0.44
TMED3-205ENST00000558562 SULT6B1Q6IMI4 303 aa17.79■□□□□ 0.44
TMED3-205ENST00000558562 CCDC88AQ3V6T2 1871 aa17.79■□□□□ 0.44
TMED3-205ENST00000558562 TTLL6Q8N841 843 aa17.78■□□□□ 0.44
TMED3-205ENST00000558562 GTF3C3Q9Y5Q9 886 aa17.78■□□□□ 0.44
TMED3-205ENST00000558562 TIAM2Q8IVF5 1701 aa17.78■□□□□ 0.44
TMED3-205ENST00000558562 SCN11AQ9UI33 1791 aa17.77■□□□□ 0.44
TMED3-205ENST00000558562 NFKBIEO00221 500 aa17.77■□□□□ 0.44
TMED3-205ENST00000558562 SERPINB2P05120 415 aa17.77■□□□□ 0.44
TMED3-205ENST00000558562 CYP19A1P11511 503 aaPredicted RBP17.77■□□□□ 0.44
TMED3-205ENST00000558562 SLC39A6Q13433 755 aa17.77■□□□□ 0.44
TMED3-205ENST00000558562 C2CD5Q86YS7 1000 aa17.77■□□□□ 0.44
TMED3-205ENST00000558562 POTECB2RU33 542 aa17.76■□□□□ 0.43
TMED3-205ENST00000558562 CFAP53Q96M91 514 aa17.76■□□□□ 0.43
TMED3-205ENST00000558562 BCL2L12Q9HB09 334 aa17.76■□□□□ 0.43
TMED3-205ENST00000558562 LGR6Q9HBX8 967 aa17.76■□□□□ 0.43
TMED3-205ENST00000558562 NARFQ9UHQ1 456 aa17.76■□□□□ 0.43
TMED3-205ENST00000558562 ZBTB1Q9Y2K1 713 aa17.76■□□□□ 0.43
TMED3-205ENST00000558562 CARMIL3Q8ND23 1372 aa17.76■□□□□ 0.43
TMED3-205ENST00000558562 DLEC1Q9Y238 1755 aa17.76■□□□□ 0.43
TMED3-205ENST00000558562 SLC52A2Q9HAB3 445 aa17.75■□□□□ 0.43
TMED3-205ENST00000558562 ZNF219Q9P2Y4 722 aaPredicted RBP17.75■□□□□ 0.43
TMED3-205ENST00000558562 COL15A1P39059 1388 aa17.75■□□□□ 0.43
TMED3-205ENST00000558562 NRXN2Q9P2S2 1712 aa17.75■□□□□ 0.43
TMED3-205ENST00000558562 BICDL1Q6ZP65 573 aa17.74■□□□□ 0.43
TMED3-205ENST00000558562 ADAMTS8Q9UP79 889 aa17.74■□□□□ 0.43
TMED3-205ENST00000558562 H0YIN7 160 aa17.73■□□□□ 0.43
TMED3-205ENST00000558562 AKAP4Q5JQC9 854 aa17.73■□□□□ 0.43
TMED3-205ENST00000558562 COL3A1P02461 1466 aaPredicted RBP17.72■□□□□ 0.43
TMED3-205ENST00000558562 CANXP27824 592 aaKnown RBP17.72■□□□□ 0.43
TMED3-205ENST00000558562 MKRN1Q9UHC7 482 aaKnown RBP17.72■□□□□ 0.43
TMED3-205ENST00000558562 IL13P35225 146 aa17.71■□□□□ 0.43
TMED3-205ENST00000558562 DPY19L2Q6NUT2 758 aa17.71■□□□□ 0.43
TMED3-205ENST00000558562 CCDC24Q8N4L8 307 aa17.71■□□□□ 0.43
TMED3-205ENST00000558562 ZNF622Q969S3 477 aaKnown RBP eCLIP17.71■□□□□ 0.43
TMED3-205ENST00000558562 RNMTO43148 476 aaKnown RBP17.7■□□□□ 0.42
TMED3-205ENST00000558562 C21orf2O43822 256 aa17.7■□□□□ 0.42
TMED3-205ENST00000558562 POTEIP0CG38 1075 aa17.7■□□□□ 0.42
TMED3-205ENST00000558562 POTEJP0CG39 1038 aa17.7■□□□□ 0.42
TMED3-205ENST00000558562 ERFEQ4G0M1 354 aa17.7■□□□□ 0.42
TMED3-205ENST00000558562 TBC1D9BQ66K14 1250 aa17.68■□□□□ 0.42
TMED3-205ENST00000558562 VIRMAQ69YN4 1812 aaKnown RBP17.68■□□□□ 0.42
TMED3-205ENST00000558562 ANKRD31Q8N7Z5 1873 aa17.67■□□□□ 0.42
TMED3-205ENST00000558562 HMOX1P09601 288 aa17.67■□□□□ 0.42
TMED3-205ENST00000558562 CHADLQ6NUI6 762 aa17.67■□□□□ 0.42
TMED3-205ENST00000558562 CREBZFQ9NS37 354 aa17.67■□□□□ 0.42
TMED3-205ENST00000558562 MRC1P22897 1456 aa17.67■□□□□ 0.42
TMED3-205ENST00000558562 DDNO94850 711 aaPredicted RBP17.66■□□□□ 0.42
TMED3-205ENST00000558562 FER1L6Q2WGJ9 1857 aa17.65■□□□□ 0.42
TMED3-205ENST00000558562 DICER1Q9UPY3 1922 aaKnown RBP17.65■□□□□ 0.42
TMED3-205ENST00000558562 COL11A2P13942 1736 aaPredicted RBP17.65■□□□□ 0.42
TMED3-205ENST00000558562 FOXN1O15353 648 aa17.65■□□□□ 0.42
TMED3-205ENST00000558562 EIF5P55010 431 aaKnown RBP17.65■□□□□ 0.42
TMED3-205ENST00000558562 ZNF330Q9Y3S2 320 aaPredicted RBP17.65■□□□□ 0.42
TMED3-205ENST00000558562 PDE6BP35913 854 aa17.64■□□□□ 0.41
TMED3-205ENST00000558562 MTHFSDQ2M296 383 aaKnown RBP17.64■□□□□ 0.41
TMED3-205ENST00000558562 PRR5LQ6MZQ0 368 aa17.64■□□□□ 0.41
TMED3-205ENST00000558562 CCDC146Q8IYE0 955 aa17.64■□□□□ 0.41
TMED3-205ENST00000558562 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
TMED3-205ENST00000558562 BRIP1Q9BX63 1249 aa17.64■□□□□ 0.41
TMED3-205ENST00000558562 TBC1D2BQ9UPU7 963 aa17.64■□□□□ 0.41
TMED3-205ENST00000558562 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms