RNA–Protein interactions for RNA: ENST00000558488.1

RNF213-206, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-206ENST00000558488 LAMB4A4D0S4 1761 aa23.17■■□□□ 1.3
RNF213-206ENST00000558488 SNRPA1P09661 255 aaKnown RBP23.17■■□□□ 1.3
RNF213-206ENST00000558488 TWISTNBQ3B726 338 aaPredicted RBP23.17■■□□□ 1.3
RNF213-206ENST00000558488 C8orf58Q8NAV2 365 aa23.17■■□□□ 1.3
RNF213-206ENST00000558488 TEX13AQ9BXU3 409 aaPredicted RBP23.17■■□□□ 1.3
RNF213-206ENST00000558488 HMGB2P26583 209 aaKnown RBP23.16■■□□□ 1.3
RNF213-206ENST00000558488 KAT6BQ8WYB5 2073 aa23.15■■□□□ 1.3
RNF213-206ENST00000558488 LOC102724428A0A0B4J2F2 783 aa23.15■■□□□ 1.3
RNF213-206ENST00000558488 PTCD1O75127 700 aaKnown RBP23.15■■□□□ 1.3
RNF213-206ENST00000558488 SIK1P57059 783 aa23.15■■□□□ 1.3
RNF213-206ENST00000558488 C5P01031 1676 aa23.14■■□□□ 1.29
RNF213-206ENST00000558488 VAMP4O75379 141 aa23.14■■□□□ 1.29
RNF213-206ENST00000558488 KRT24Q2M2I5 525 aa23.14■■□□□ 1.29
RNF213-206ENST00000558488 TSPYL6Q8N831 410 aa23.14■■□□□ 1.29
RNF213-206ENST00000558488 TJP1Q07157 1748 aa23.13■■□□□ 1.29
RNF213-206ENST00000558488 CENPBP07199 599 aaPredicted RBP23.13■■□□□ 1.29
RNF213-206ENST00000558488 RBM42Q9BTD8 480 aaKnown RBP23.13■■□□□ 1.29
RNF213-206ENST00000558488 ERBB4Q15303 1308 aa23.12■■□□□ 1.29
RNF213-206ENST00000558488 SLC27A3Q5K4L6 730 aa23.12■■□□□ 1.29
RNF213-206ENST00000558488 TXNRD1Q16881 649 aa23.11■■□□□ 1.29
RNF213-206ENST00000558488 SLC4A9Q96Q91 983 aa23.11■■□□□ 1.29
RNF213-206ENST00000558488 SLC15A2Q16348 729 aa23.1■■□□□ 1.29
RNF213-206ENST00000558488 ALDH1L2Q3SY69 923 aa23.1■■□□□ 1.29
RNF213-206ENST00000558488 HDGFL1Q5TGJ6 251 aa23.1■■□□□ 1.29
RNF213-206ENST00000558488 ELL2O00472 640 aaPredicted RBP23.09■■□□□ 1.29
RNF213-206ENST00000558488 ATP6V1AP38606 617 aa23.09■■□□□ 1.29
RNF213-206ENST00000558488 CCDC30Q5VVM6 783 aa23.09■■□□□ 1.29
RNF213-206ENST00000558488 CCNL1Q9UK58 526 aaPredicted RBP23.09■■□□□ 1.29
RNF213-206ENST00000558488 COL5A3P25940 1745 aaPredicted RBP23.08■■□□□ 1.29
RNF213-206ENST00000558488 STARD3NLO95772 234 aa23.08■■□□□ 1.29
RNF213-206ENST00000558488 DNAJC10Q8IXB1 793 aa23.08■■□□□ 1.29
RNF213-206ENST00000558488 MTFR1LQ9H019 292 aa23.07■■□□□ 1.28
RNF213-206ENST00000558488 STK32BQ9NY57 414 aa23.07■■□□□ 1.28
RNF213-206ENST00000558488 PRAMEF22A3QJZ6 481 aa23.06■■□□□ 1.28
RNF213-206ENST00000558488 RCAN3Q9UKA8 241 aa23.06■■□□□ 1.28
RNF213-206ENST00000558488 USP16Q9Y5T5 823 aa23.06■■□□□ 1.28
RNF213-206ENST00000558488 CYP19A1P11511 503 aaPredicted RBP23.05■■□□□ 1.28
RNF213-206ENST00000558488 RARSP54136 660 aaKnown RBP23.05■■□□□ 1.28
RNF213-206ENST00000558488 BRPF1P55201 1214 aaPredicted RBP23.05■■□□□ 1.28
RNF213-206ENST00000558488 ITPK1Q13572 414 aa23.05■■□□□ 1.28
RNF213-206ENST00000558488 STK31Q9BXU1 1019 aa23.05■■□□□ 1.28
RNF213-206ENST00000558488 CNTNAP4Q9C0A0 1308 aa23.05■■□□□ 1.28
RNF213-206ENST00000558488 DBF4Q9UBU7 674 aaPredicted RBP23.04■■□□□ 1.28
RNF213-206ENST00000558488 EIF2S2P20042 333 aaKnown RBP23.03■■□□□ 1.28
RNF213-206ENST00000558488 ARXQ96QS3 562 aa23.03■■□□□ 1.28
RNF213-206ENST00000558488 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
RNF213-206ENST00000558488 RC3H1Q5TC82 1133 aaKnown RBP23.02■■□□□ 1.28
RNF213-206ENST00000558488 SSH1Q8WYL5 1049 aa23.02■■□□□ 1.28
RNF213-206ENST00000558488 DDX21Q9NR30 783 aaKnown RBP eCLIP23.02■■□□□ 1.28
RNF213-206ENST00000558488 SMC4Q9NTJ3 1288 aa23.01■■□□□ 1.27
RNF213-206ENST00000558488 C4BP0C0L5 1744 aa23■■□□□ 1.27
RNF213-206ENST00000558488 LINC00116Q8NCU8 138 aa23■■□□□ 1.27
RNF213-206ENST00000558488 LRRC4BQ9NT99 713 aa23■■□□□ 1.27
RNF213-206ENST00000558488 CCDC87Q9NVE4 849 aa23■■□□□ 1.27
RNF213-206ENST00000558488 HYPKQ9NX55 129 aa23■■□□□ 1.27
RNF213-206ENST00000558488 CHPF2Q9P2E5 772 aa23■■□□□ 1.27
RNF213-206ENST00000558488 KIF16BQ96L93 1317 aa23■■□□□ 1.27
RNF213-206ENST00000558488 TUBGCP6Q96RT7 1819 aa22.99■■□□□ 1.27
RNF213-206ENST00000558488 CRKLP46109 303 aaKnown RBP22.99■■□□□ 1.27
RNF213-206ENST00000558488 PDIA6Q15084 440 aa22.99■■□□□ 1.27
RNF213-206ENST00000558488 ZNF827Q17R98 1081 aa22.99■■□□□ 1.27
RNF213-206ENST00000558488 MRPL50Q8N5N7 158 aaKnown RBP22.99■■□□□ 1.27
RNF213-206ENST00000558488 CACNA1FO60840 1977 aa22.99■■□□□ 1.27
RNF213-206ENST00000558488 COL24A1Q17RW2 1714 aa22.98■■□□□ 1.27
RNF213-206ENST00000558488 IL6STP40189 918 aaPredicted RBP22.97■■□□□ 1.27
RNF213-206ENST00000558488 INTS5Q6P9B9 1019 aaKnown RBP22.97■■□□□ 1.27
RNF213-206ENST00000558488 LRP10Q7Z4F1 713 aa22.97■■□□□ 1.27
RNF213-206ENST00000558488 NECTIN2Q92692 538 aa22.97■■□□□ 1.27
RNF213-206ENST00000558488 NBPF26B4DH59 902 aa22.96■■□□□ 1.27
RNF213-206ENST00000558488 A1BGP04217 495 aa22.96■■□□□ 1.27
RNF213-206ENST00000558488 SLC4A2P04920 1241 aa22.96■■□□□ 1.27
RNF213-206ENST00000558488 GPR162Q16538 588 aa22.96■■□□□ 1.27
RNF213-206ENST00000558488 NBPF10Q6P3W6 841 aaKnown RBP22.96■■□□□ 1.27
RNF213-206ENST00000558488 NBPF15Q8N660 670 aa22.96■■□□□ 1.27
RNF213-206ENST00000558488 ZBTB1Q9Y2K1 713 aa22.96■■□□□ 1.27
RNF213-206ENST00000558488 PTPRCP08575 1304 aa22.95■■□□□ 1.26
RNF213-206ENST00000558488 KCNQ4P56696 695 aa22.94■■□□□ 1.26
RNF213-206ENST00000558488 BCL2L13Q9BXK5 485 aa22.94■■□□□ 1.26
RNF213-206ENST00000558488 TCERG1O14776 1098 aaKnown RBP22.93■■□□□ 1.26
RNF213-206ENST00000558488 RPS6KA4O75676 772 aa22.93■■□□□ 1.26
RNF213-206ENST00000558488 BCAR3O75815 825 aa22.93■■□□□ 1.26
RNF213-206ENST00000558488 PROSER3Q2NL68 480 aa22.93■■□□□ 1.26
RNF213-206ENST00000558488 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.93■■□□□ 1.26
RNF213-206ENST00000558488 ARHGAP45Q92619 1136 aa22.93■■□□□ 1.26
RNF213-206ENST00000558488 AK7Q96M32 723 aa22.93■■□□□ 1.26
RNF213-206ENST00000558488 RNF123Q5XPI4 1314 aa22.92■■□□□ 1.26
RNF213-206ENST00000558488 IPO8O15397 1037 aaKnown RBP22.92■■□□□ 1.26
RNF213-206ENST00000558488 EIF5P55010 431 aaKnown RBP22.92■■□□□ 1.26
RNF213-206ENST00000558488 FLIIQ13045 1269 aa22.92■■□□□ 1.26
RNF213-206ENST00000558488 NLGN2Q8NFZ4 835 aa22.92■■□□□ 1.26
RNF213-206ENST00000558488 MYH14Q7Z406 1995 aaKnown RBP22.92■■□□□ 1.26
RNF213-206ENST00000558488 QSER1Q2KHR3 1735 aa22.91■■□□□ 1.26
RNF213-206ENST00000558488 MYL6BP14649 208 aa22.91■■□□□ 1.26
RNF213-206ENST00000558488 ADRA2BP18089 450 aa22.91■■□□□ 1.26
RNF213-206ENST00000558488 CANXP27824 592 aaKnown RBP22.91■■□□□ 1.26
RNF213-206ENST00000558488 COL15A1P39059 1388 aa22.9■■□□□ 1.26
RNF213-206ENST00000558488 A0A087WZG4 1122 aa22.9■■□□□ 1.26
RNF213-206ENST00000558488 DDX58O95786 925 aaKnown RBP22.9■■□□□ 1.26
RNF213-206ENST00000558488 ANXA1P04083 346 aa22.9■■□□□ 1.26
RNF213-206ENST00000558488 NPM2Q86SE8 214 aaKnown RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms