RNA–Protein interactions for RNA: ENST00000558478.1

AL136295.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL136295.2, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL136295.2-201ENST00000558478 DDX19BQ9UMR2 479 aa12.97□□□□□ -0.33
AL136295.2-201ENST00000558478 TOGARAM1Q9Y4F4 1720 aa12.96□□□□□ -0.33
AL136295.2-201ENST00000558478 THSD7AQ9UPZ6 1657 aa12.96□□□□□ -0.33
AL136295.2-201ENST00000558478 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.33
AL136295.2-201ENST00000558478 SNRPA1P09661 255 aaKnown RBP12.96□□□□□ -0.33
AL136295.2-201ENST00000558478 MVPQ14764 893 aaKnown RBP12.96□□□□□ -0.33
AL136295.2-201ENST00000558478 GJD4Q96KN9 370 aaPredicted RBP12.96□□□□□ -0.33
AL136295.2-201ENST00000558478 DBF4Q9UBU7 674 aaPredicted RBP12.96□□□□□ -0.33
AL136295.2-201ENST00000558478 ZNF772Q68DY9 489 aaPredicted RBP12.95□□□□□ -0.34
AL136295.2-201ENST00000558478 ITPRIPQ8IWB1 547 aa12.95□□□□□ -0.34
AL136295.2-201ENST00000558478 PANK1Q8TE04 598 aa12.95□□□□□ -0.34
AL136295.2-201ENST00000558478 CLUAP1Q96AJ1 413 aa12.95□□□□□ -0.34
AL136295.2-201ENST00000558478 DOT1LQ8TEK3 1739 aa12.95□□□□□ -0.34
AL136295.2-201ENST00000558478 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
AL136295.2-201ENST00000558478 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
AL136295.2-201ENST00000558478 ABCC4O15439 1325 aa12.94□□□□□ -0.34
AL136295.2-201ENST00000558478 KCNQ3O43525 872 aa12.94□□□□□ -0.34
AL136295.2-201ENST00000558478 EIF2S2P20042 333 aaKnown RBP12.94□□□□□ -0.34
AL136295.2-201ENST00000558478 SLC39A6Q13433 755 aa12.94□□□□□ -0.34
AL136295.2-201ENST00000558478 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
AL136295.2-201ENST00000558478 BCL9O00512 1426 aa12.94□□□□□ -0.34
AL136295.2-201ENST00000558478 GLI3P10071 1580 aa12.94□□□□□ -0.34
AL136295.2-201ENST00000558478 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
AL136295.2-201ENST00000558478 PXDNLA1KZ92 1463 aa12.93□□□□□ -0.34
AL136295.2-201ENST00000558478 TCERG1O14776 1098 aaKnown RBP12.93□□□□□ -0.34
AL136295.2-201ENST00000558478 FLIIQ13045 1269 aa12.93□□□□□ -0.34
AL136295.2-201ENST00000558478 FKBP5Q13451 457 aaPredicted RBP12.93□□□□□ -0.34
AL136295.2-201ENST00000558478 SYTL4Q96C24 671 aaPredicted RBP12.93□□□□□ -0.34
AL136295.2-201ENST00000558478 ZNF496Q96IT1 587 aaPredicted RBP12.93□□□□□ -0.34
AL136295.2-201ENST00000558478 TEX13AQ9BXU3 409 aaPredicted RBP12.93□□□□□ -0.34
AL136295.2-201ENST00000558478 HYPKQ9NX55 129 aa12.93□□□□□ -0.34
AL136295.2-201ENST00000558478 ITGB4P16144 1822 aa12.92□□□□□ -0.34
AL136295.2-201ENST00000558478 DDX58O95786 925 aaKnown RBP12.92□□□□□ -0.34
AL136295.2-201ENST00000558478 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
AL136295.2-201ENST00000558478 NECTIN2Q92692 538 aa12.92□□□□□ -0.34
AL136295.2-201ENST00000558478 ZBTB12Q9Y330 459 aaPredicted RBP12.92□□□□□ -0.34
AL136295.2-201ENST00000558478 KCPQ6ZWJ8 1503 aa12.92□□□□□ -0.34
AL136295.2-201ENST00000558478 RLBP1P12271 317 aa12.91□□□□□ -0.34
AL136295.2-201ENST00000558478 CCT4P50991 539 aaKnown RBP12.91□□□□□ -0.34
AL136295.2-201ENST00000558478 TMEM57Q8N5G2 664 aa12.91□□□□□ -0.34
AL136295.2-201ENST00000558478 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
AL136295.2-201ENST00000558478 PIGBQ92521 554 aa12.91□□□□□ -0.34
AL136295.2-201ENST00000558478 QTRT2Q9H974 415 aaKnown RBP12.91□□□□□ -0.34
AL136295.2-201ENST00000558478 DDX21Q9NR30 783 aaKnown RBP eCLIP12.91□□□□□ -0.34
AL136295.2-201ENST00000558478 CHPF2Q9P2E5 772 aa12.91□□□□□ -0.34
AL136295.2-201ENST00000558478 C5P01031 1676 aa12.91□□□□□ -0.34
AL136295.2-201ENST00000558478 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
AL136295.2-201ENST00000558478 B4GALNT3Q6L9W6 998 aa12.9□□□□□ -0.34
AL136295.2-201ENST00000558478 SMARCC1Q92922 1105 aaPredicted RBP12.9□□□□□ -0.34
AL136295.2-201ENST00000558478 STARD3NLO95772 234 aa12.89□□□□□ -0.35
AL136295.2-201ENST00000558478 PRIM1P49642 420 aaKnown RBP12.89□□□□□ -0.35
AL136295.2-201ENST00000558478 INTS3Q68E01 1043 aaKnown RBP12.89□□□□□ -0.35
AL136295.2-201ENST00000558478 RGS12O14924 1447 aa12.88□□□□□ -0.35
AL136295.2-201ENST00000558478 PTCD1O75127 700 aaKnown RBP12.88□□□□□ -0.35
AL136295.2-201ENST00000558478 ATG3Q9NT62 314 aa12.88□□□□□ -0.35
AL136295.2-201ENST00000558478 TNNQ9UQP3 1299 aa12.88□□□□□ -0.35
AL136295.2-201ENST00000558478 N4BP2Q86UW6 1770 aaPredicted RBP12.87□□□□□ -0.35
AL136295.2-201ENST00000558478 RBM6P78332 1123 aaKnown RBP12.87□□□□□ -0.35
AL136295.2-201ENST00000558478 CENPQQ7L2Z9 268 aaPredicted RBP12.87□□□□□ -0.35
AL136295.2-201ENST00000558478 SEPT12Q8IYM1 358 aa12.87□□□□□ -0.35
AL136295.2-201ENST00000558478 ASAP1Q9ULH1 1129 aa12.87□□□□□ -0.35
AL136295.2-201ENST00000558478 NHSQ6T4R5 1651 aa12.86□□□□□ -0.35
AL136295.2-201ENST00000558478 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
AL136295.2-201ENST00000558478 G2E3Q7L622 706 aa12.86□□□□□ -0.35
AL136295.2-201ENST00000558478 CICQ96RK0 1608 aaPredicted RBP12.85□□□□□ -0.35
AL136295.2-201ENST00000558478 PRAMEF22A3QJZ6 481 aa12.85□□□□□ -0.35
AL136295.2-201ENST00000558478 NPM2Q86SE8 214 aaKnown RBP12.85□□□□□ -0.35
AL136295.2-201ENST00000558478 DNAAF4Q8WXU2 420 aa12.85□□□□□ -0.35
AL136295.2-201ENST00000558478 ACSBG1Q96GR2 724 aa12.85□□□□□ -0.35
AL136295.2-201ENST00000558478 RWDD1Q9H446 243 aaPredicted RBP12.85□□□□□ -0.35
AL136295.2-201ENST00000558478 HDAC5Q9UQL6 1122 aa12.85□□□□□ -0.35
AL136295.2-201ENST00000558478 USP16Q9Y5T5 823 aa12.85□□□□□ -0.35
AL136295.2-201ENST00000558478 ATP10DQ9P241 1426 aa12.85□□□□□ -0.35
AL136295.2-201ENST00000558478 PALLDQ8WX93 1383 aa12.84□□□□□ -0.35
AL136295.2-201ENST00000558478 GNAI3P08754 354 aa12.84□□□□□ -0.35
AL136295.2-201ENST00000558478 MYL6BP14649 208 aa12.84□□□□□ -0.35
AL136295.2-201ENST00000558478 HMGB2P26583 209 aaKnown RBP12.84□□□□□ -0.35
AL136295.2-201ENST00000558478 NEXNQ0ZGT2 675 aa12.84□□□□□ -0.35
AL136295.2-201ENST00000558478 KSR2Q6VAB6 950 aa12.84□□□□□ -0.35
AL136295.2-201ENST00000558478 SRCIN1Q9C0H9 1055 aa12.84□□□□□ -0.35
AL136295.2-201ENST00000558478 PHAXQ9H814 394 aaKnown RBP12.84□□□□□ -0.35
AL136295.2-201ENST00000558478 ZBTB40Q9NUA8 1239 aa12.84□□□□□ -0.35
AL136295.2-201ENST00000558478 KAT6BQ8WYB5 2073 aa12.84□□□□□ -0.35
AL136295.2-201ENST00000558478 ZNF831Q5JPB2 1677 aa12.83□□□□□ -0.35
AL136295.2-201ENST00000558478 PI4KAP2A4QPH2 592 aa12.83□□□□□ -0.36
AL136295.2-201ENST00000558478 F6X3S4 739 aa12.83□□□□□ -0.36
AL136295.2-201ENST00000558478 ZBTB7BO15156 539 aaPredicted RBP12.83□□□□□ -0.36
AL136295.2-201ENST00000558478 PDIA6Q15084 440 aa12.83□□□□□ -0.36
AL136295.2-201ENST00000558478 PI4KAP1Q8N8J0 262 aa12.83□□□□□ -0.36
AL136295.2-201ENST00000558478 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
AL136295.2-201ENST00000558478 IBTKQ9P2D0 1353 aaPredicted RBP12.82□□□□□ -0.36
AL136295.2-201ENST00000558478 ALDH1L1O75891 902 aa12.82□□□□□ -0.36
AL136295.2-201ENST00000558478 PROSER3Q2NL68 480 aa12.82□□□□□ -0.36
AL136295.2-201ENST00000558478 FAM196AQ6ZSG2 479 aa12.82□□□□□ -0.36
AL136295.2-201ENST00000558478 KRT27Q7Z3Y8 459 aa12.82□□□□□ -0.36
AL136295.2-201ENST00000558478 RIC3Q7Z5B4 369 aa12.82□□□□□ -0.36
AL136295.2-201ENST00000558478 ADCY9O60503 1353 aa12.81□□□□□ -0.36
AL136295.2-201ENST00000558478 LOC102724428A0A0B4J2F2 783 aa12.81□□□□□ -0.36
AL136295.2-201ENST00000558478 ANXA1P04083 346 aa12.81□□□□□ -0.36
AL136295.2-201ENST00000558478 RXRBP28702 533 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms