RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 HYPKQ9NX55 129 aa19■□□□□ 0.63
VPS18-202ENST00000558474 NOB1Q9ULX3 412 aaKnown RBP19■□□□□ 0.63
VPS18-202ENST00000558474 STARD3NLO95772 234 aa18.99■□□□□ 0.63
VPS18-202ENST00000558474 FAM182BQ5T319 152 aa18.99■□□□□ 0.63
VPS18-202ENST00000558474 ATF7IPQ6VMQ6 1270 aa18.99■□□□□ 0.63
VPS18-202ENST00000558474 RBM42Q9BTD8 480 aaKnown RBP18.99■□□□□ 0.63
VPS18-202ENST00000558474 API5Q9BZZ5 524 aaKnown RBP18.99■□□□□ 0.63
VPS18-202ENST00000558474 USP16Q9Y5T5 823 aa18.99■□□□□ 0.63
VPS18-202ENST00000558474 LOC102724428A0A0B4J2F2 783 aa18.98■□□□□ 0.63
VPS18-202ENST00000558474 PRAMEF22A3QJZ6 481 aa18.98■□□□□ 0.63
VPS18-202ENST00000558474 SIK1P57059 783 aa18.98■□□□□ 0.63
VPS18-202ENST00000558474 FRAT1Q92837 279 aaPredicted RBP18.98■□□□□ 0.63
VPS18-202ENST00000558474 CHPF2Q9P2E5 772 aa18.97■□□□□ 0.63
VPS18-202ENST00000558474 COL5A3P25940 1745 aaPredicted RBP18.97■□□□□ 0.63
VPS18-202ENST00000558474 PLIN1O60240 522 aa18.96■□□□□ 0.63
VPS18-202ENST00000558474 RREB1Q92766 1687 aa18.95■□□□□ 0.62
VPS18-202ENST00000558474 TRIM27P14373 513 aa18.95■□□□□ 0.62
VPS18-202ENST00000558474 FLIIQ13045 1269 aa18.95■□□□□ 0.62
VPS18-202ENST00000558474 PDIA6Q15084 440 aa18.95■□□□□ 0.62
VPS18-202ENST00000558474 DZIP1LQ8IYY4 767 aaKnown RBP18.95■□□□□ 0.62
VPS18-202ENST00000558474 SLC4A9Q96Q91 983 aa18.95■□□□□ 0.62
VPS18-202ENST00000558474 RGPD3A6NKT7 1758 aaPredicted RBP18.95■□□□□ 0.62
VPS18-202ENST00000558474 RGPD4Q7Z3J3 1758 aa18.95■□□□□ 0.62
VPS18-202ENST00000558474 TCERG1O14776 1098 aaKnown RBP18.94■□□□□ 0.62
VPS18-202ENST00000558474 ATP6V1AP38606 617 aa18.94■□□□□ 0.62
VPS18-202ENST00000558474 DNAJC10Q8IXB1 793 aa18.94■□□□□ 0.62
VPS18-202ENST00000558474 NECTIN2Q92692 538 aa18.94■□□□□ 0.62
VPS18-202ENST00000558474 CYP19A1P11511 503 aaPredicted RBP18.93■□□□□ 0.62
VPS18-202ENST00000558474 AAMPQ13685 434 aa18.93■□□□□ 0.62
VPS18-202ENST00000558474 FTSJ3Q8IY81 847 aaKnown RBP18.93■□□□□ 0.62
VPS18-202ENST00000558474 ABCC4O15439 1325 aa18.93■□□□□ 0.62
VPS18-202ENST00000558474 N4BP2Q86UW6 1770 aaPredicted RBP18.93■□□□□ 0.62
VPS18-202ENST00000558474 PXDNLA1KZ92 1463 aa18.92■□□□□ 0.62
VPS18-202ENST00000558474 TNS1Q9HBL0 1735 aaKnown RBP18.92■□□□□ 0.62
VPS18-202ENST00000558474 PLSCR1O15162 318 aa18.92■□□□□ 0.62
VPS18-202ENST00000558474 TRIM37O94972 964 aa18.92■□□□□ 0.62
VPS18-202ENST00000558474 DDX58O95786 925 aaKnown RBP18.92■□□□□ 0.62
VPS18-202ENST00000558474 PTF1AQ7RTS3 328 aa18.92■□□□□ 0.62
VPS18-202ENST00000558474 TAF1LQ8IZX4 1826 aa18.92■□□□□ 0.62
VPS18-202ENST00000558474 SLC27A3Q5K4L6 730 aa18.91■□□□□ 0.62
VPS18-202ENST00000558474 G2E3Q7L622 706 aa18.91■□□□□ 0.62
VPS18-202ENST00000558474 LRP10Q7Z4F1 713 aa18.91■□□□□ 0.62
VPS18-202ENST00000558474 FKBP5Q13451 457 aaPredicted RBP18.9■□□□□ 0.62
VPS18-202ENST00000558474 CHMP4BQ9H444 224 aaKnown RBP18.9■□□□□ 0.62
VPS18-202ENST00000558474 PHAXQ9H814 394 aaKnown RBP18.9■□□□□ 0.62
VPS18-202ENST00000558474 NBPF26B4DH59 902 aa18.89■□□□□ 0.61
VPS18-202ENST00000558474 IL6STP40189 918 aaPredicted RBP18.89■□□□□ 0.61
VPS18-202ENST00000558474 FKBP8Q14318 412 aa18.89■□□□□ 0.61
VPS18-202ENST00000558474 PROSER3Q2NL68 480 aa18.89■□□□□ 0.61
VPS18-202ENST00000558474 RC3H1Q5TC82 1133 aaKnown RBP18.89■□□□□ 0.61
VPS18-202ENST00000558474 C20orf194Q5TEA3 1177 aa18.89■□□□□ 0.61
VPS18-202ENST00000558474 NBPF14Q5TI25 921 aa18.89■□□□□ 0.61
VPS18-202ENST00000558474 NBPF10Q6P3W6 841 aaKnown RBP18.89■□□□□ 0.61
VPS18-202ENST00000558474 NBPF15Q8N660 670 aa18.89■□□□□ 0.61
VPS18-202ENST00000558474 CNTNAP4Q9C0A0 1308 aa18.89■□□□□ 0.61
VPS18-202ENST00000558474 A1BGP04217 495 aa18.88■□□□□ 0.61
VPS18-202ENST00000558474 ITPK1Q13572 414 aa18.88■□□□□ 0.61
VPS18-202ENST00000558474 MVPQ14764 893 aaKnown RBP18.88■□□□□ 0.61
VPS18-202ENST00000558474 INTS3Q68E01 1043 aaKnown RBP18.88■□□□□ 0.61
VPS18-202ENST00000558474 KSR2Q6VAB6 950 aa18.88■□□□□ 0.61
VPS18-202ENST00000558474 CCDC87Q9NVE4 849 aa18.88■□□□□ 0.61
VPS18-202ENST00000558474 CCNL1Q9UK58 526 aaPredicted RBP18.88■□□□□ 0.61
VPS18-202ENST00000558474 IBTKQ9P2D0 1353 aaPredicted RBP18.88■□□□□ 0.61
VPS18-202ENST00000558474 MYL6BP14649 208 aa18.87■□□□□ 0.61
VPS18-202ENST00000558474 CCT4P50991 539 aaKnown RBP18.87■□□□□ 0.61
VPS18-202ENST00000558474 DDX19BQ9UMR2 479 aa18.87■□□□□ 0.61
VPS18-202ENST00000558474 ATP10DQ9P241 1426 aa18.86■□□□□ 0.61
VPS18-202ENST00000558474 ANXA1P04083 346 aa18.86■□□□□ 0.61
VPS18-202ENST00000558474 RLBP1P12271 317 aa18.86■□□□□ 0.61
VPS18-202ENST00000558474 CRKLP46109 303 aaKnown RBP18.86■□□□□ 0.61
VPS18-202ENST00000558474 COPS6Q7L5N1 327 aa18.86■□□□□ 0.61
VPS18-202ENST00000558474 PANK1Q8TE04 598 aa18.86■□□□□ 0.61
VPS18-202ENST00000558474 XAGE3Q8WTP9 111 aa18.86■□□□□ 0.61
VPS18-202ENST00000558474 CLUAP1Q96AJ1 413 aa18.86■□□□□ 0.61
VPS18-202ENST00000558474 GTF3C3Q9Y5Q9 886 aa18.86■□□□□ 0.61
VPS18-202ENST00000558474 MYH14Q7Z406 1995 aaKnown RBP18.85■□□□□ 0.61
VPS18-202ENST00000558474 INTS5Q6P9B9 1019 aaKnown RBP18.85■□□□□ 0.61
VPS18-202ENST00000558474 ANKRD13DQ6ZTN6 518 aa18.85■□□□□ 0.61
VPS18-202ENST00000558474 DNAAF4Q8WXU2 420 aa18.85■□□□□ 0.61
VPS18-202ENST00000558474 CRBNQ96SW2 442 aa18.85■□□□□ 0.61
VPS18-202ENST00000558474 NUP188Q5SRE5 1749 aa18.85■□□□□ 0.61
VPS18-202ENST00000558474 ADCY9O60503 1353 aa18.84■□□□□ 0.61
VPS18-202ENST00000558474 ARFGEF2Q9Y6D5 1785 aa18.84■□□□□ 0.61
VPS18-202ENST00000558474 C4BP0C0L5 1744 aa18.84■□□□□ 0.61
VPS18-202ENST00000558474 PI4KAP2A4QPH2 592 aa18.84■□□□□ 0.61
VPS18-202ENST00000558474 APBA3O96018 575 aa18.84■□□□□ 0.61
VPS18-202ENST00000558474 IRX6P78412 446 aaPredicted RBP18.84■□□□□ 0.61
VPS18-202ENST00000558474 NPM2Q86SE8 214 aaKnown RBP18.84■□□□□ 0.61
VPS18-202ENST00000558474 TMEM57Q8N5G2 664 aa18.84■□□□□ 0.61
VPS18-202ENST00000558474 PI4KAP1Q8N8J0 262 aa18.84■□□□□ 0.61
VPS18-202ENST00000558474 LINC00116Q8NCU8 138 aa18.84■□□□□ 0.61
VPS18-202ENST00000558474 PLBD2Q8NHP8 589 aa18.84■□□□□ 0.61
VPS18-202ENST00000558474 TNNQ9UQP3 1299 aa18.84■□□□□ 0.61
VPS18-202ENST00000558474 ZBTB1Q9Y2K1 713 aa18.84■□□□□ 0.61
VPS18-202ENST00000558474 COG6Q9Y2V7 657 aa18.84■□□□□ 0.61
VPS18-202ENST00000558474 RGL2O15211 777 aa18.83■□□□□ 0.6
VPS18-202ENST00000558474 EIF5P55010 431 aaKnown RBP18.83■□□□□ 0.6
VPS18-202ENST00000558474 CCDC125Q86Z20 511 aa18.83■□□□□ 0.6
VPS18-202ENST00000558474 A0A087WZG4 1122 aa18.82■□□□□ 0.6
VPS18-202ENST00000558474 AIMP1Q12904 312 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms