RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 CDCA8Q53HL2 280 aa7.21□□□□□ -1.26
SPG11-208ENST00000558155 ASTLQ6HA08 431 aaPredicted RBP7.21□□□□□ -1.26
SPG11-208ENST00000558155 DCAF5Q96JK2 942 aa7.21□□□□□ -1.26
SPG11-208ENST00000558155 MAP2P11137 1827 aaKnown RBP7.21□□□□□ -1.26
SPG11-208ENST00000558155 KIF13BQ9NQT8 1826 aa7.21□□□□□ -1.26
SPG11-208ENST00000558155 TOGARAM1Q9Y4F4 1720 aa7.21□□□□□ -1.26
SPG11-208ENST00000558155 ATMINO43313 823 aaPredicted RBP7.2□□□□□ -1.26
SPG11-208ENST00000558155 VEGFAP15692 232 aaPredicted RBP7.2□□□□□ -1.26
SPG11-208ENST00000558155 LCE2DQ5TA82 110 aaPredicted RBP7.2□□□□□ -1.26
SPG11-208ENST00000558155 EYA1Q99502 592 aa7.2□□□□□ -1.26
SPG11-208ENST00000558155 EMILIN1Q9Y6C2 1016 aa7.2□□□□□ -1.26
SPG11-208ENST00000558155 WASHC2AQ641Q2 1341 aa7.2□□□□□ -1.26
SPG11-208ENST00000558155 TONSLQ96HA7 1378 aa7.2□□□□□ -1.26
SPG11-208ENST00000558155 C10orf71Q711Q0 1435 aa7.19□□□□□ -1.26
SPG11-208ENST00000558155 KCPQ6ZWJ8 1503 aa7.19□□□□□ -1.26
SPG11-208ENST00000558155 HSPA1AP0DMV8 641 aaKnown RBP7.19□□□□□ -1.26
SPG11-208ENST00000558155 HSPA1BP0DMV9 641 aaKnown RBP7.19□□□□□ -1.26
SPG11-208ENST00000558155 CABP4P57796 275 aa7.19□□□□□ -1.26
SPG11-208ENST00000558155 METRNQ9UJH8 293 aa7.19□□□□□ -1.26
SPG11-208ENST00000558155 CEP350Q5VT06 3117 aa7.19□□□□□ -1.26
SPG11-208ENST00000558155 ARFGEF1Q9Y6D6 1849 aa7.19□□□□□ -1.26
SPG11-208ENST00000558155 CNTNAP4Q9C0A0 1308 aa7.19□□□□□ -1.26
SPG11-208ENST00000558155 ZC3H4Q9UPT8 1303 aaKnown RBP7.19□□□□□ -1.26
SPG11-208ENST00000558155 GLTPD2A6NH11 291 aa7.18□□□□□ -1.26
SPG11-208ENST00000558155 PLEKHO1Q53GL0 409 aaPredicted RBP7.18□□□□□ -1.26
SPG11-208ENST00000558155 DPY19L2Q6NUT2 758 aa7.18□□□□□ -1.26
SPG11-208ENST00000558155 SLC4A9Q96Q91 983 aa7.18□□□□□ -1.26
SPG11-208ENST00000558155 PKD1L3Q7Z443 1732 aa7.18□□□□□ -1.26
SPG11-208ENST00000558155 SBF1O95248 1867 aa7.17□□□□□ -1.26
SPG11-208ENST00000558155 ZPR1O75312 459 aa7.17□□□□□ -1.26
SPG11-208ENST00000558155 LMNB1P20700 586 aa7.17□□□□□ -1.26
SPG11-208ENST00000558155 TM4SF1P30408 202 aa7.17□□□□□ -1.26
SPG11-208ENST00000558155 CHRNA5P30532 468 aa7.17□□□□□ -1.26
SPG11-208ENST00000558155 FKBP8Q14318 412 aa7.17□□□□□ -1.26
SPG11-208ENST00000558155 C4AP0C0L4 1744 aa7.17□□□□□ -1.26
SPG11-208ENST00000558155 KIAA1551Q9HCM1 1747 aa7.17□□□□□ -1.26
SPG11-208ENST00000558155 BRCA1P38398 1863 aaKnown RBP7.17□□□□□ -1.26
SPG11-208ENST00000558155 PTCD1O75127 700 aaKnown RBP7.16□□□□□ -1.26
SPG11-208ENST00000558155 CRKLP46109 303 aaKnown RBP7.16□□□□□ -1.26
SPG11-208ENST00000558155 MTHFSP49914 203 aa7.16□□□□□ -1.26
SPG11-208ENST00000558155 AMOTQ4VCS5 1084 aa7.16□□□□□ -1.26
SPG11-208ENST00000558155 TTLL6Q8N841 843 aa7.16□□□□□ -1.26
SPG11-208ENST00000558155 CARD14Q9BXL6 1004 aa7.16□□□□□ -1.26
SPG11-208ENST00000558155 POLKQ9UBT6 870 aa7.16□□□□□ -1.26
SPG11-208ENST00000558155 SRP68Q9UHB9 627 aaKnown RBP7.16□□□□□ -1.26
SPG11-208ENST00000558155 GOLGB1Q14789 3259 aaKnown RBP7.16□□□□□ -1.26
SPG11-208ENST00000558155 NCAPD2Q15021 1401 aa7.16□□□□□ -1.26
SPG11-208ENST00000558155 POLRMTO00411 1230 aaKnown RBP7.15□□□□□ -1.26
SPG11-208ENST00000558155 DDR1Q08345 913 aa7.15□□□□□ -1.26
SPG11-208ENST00000558155 C1orf141Q5JVX7 400 aa7.15□□□□□ -1.26
SPG11-208ENST00000558155 NFATC2IPQ8NCF5 419 aa7.15□□□□□ -1.26
SPG11-208ENST00000558155 USP42Q9H9J4 1324 aaKnown RBP7.15□□□□□ -1.26
SPG11-208ENST00000558155 KDRP35968 1356 aa7.15□□□□□ -1.26
SPG11-208ENST00000558155 ZNF831Q5JPB2 1677 aa7.15□□□□□ -1.27
SPG11-208ENST00000558155 TNRC6CQ9HCJ0 1690 aaKnown RBP7.15□□□□□ -1.27
SPG11-208ENST00000558155 MYH14Q7Z406 1995 aaKnown RBP7.15□□□□□ -1.27
SPG11-208ENST00000558155 POTEFA5A3E0 1075 aa7.14□□□□□ -1.27
SPG11-208ENST00000558155 H0YIN7 160 aa7.14□□□□□ -1.27
SPG11-208ENST00000558155 C7P10643 843 aa7.14□□□□□ -1.27
SPG11-208ENST00000558155 RASSF7Q02833 373 aa7.14□□□□□ -1.27
SPG11-208ENST00000558155 EIF4A2Q14240 407 aaKnown RBP7.14□□□□□ -1.27
SPG11-208ENST00000558155 USPL1Q5W0Q7 1092 aa7.14□□□□□ -1.27
SPG11-208ENST00000558155 ZNF530Q6P9A1 599 aaPredicted RBP7.14□□□□□ -1.27
SPG11-208ENST00000558155 SLC39A7Q92504 469 aa7.14□□□□□ -1.27
SPG11-208ENST00000558155 KIF20BQ96Q89 1820 aa7.14□□□□□ -1.27
SPG11-208ENST00000558155 CCDC88AQ3V6T2 1871 aa7.13□□□□□ -1.27
SPG11-208ENST00000558155 SERPINB2P05120 415 aa7.13□□□□□ -1.27
SPG11-208ENST00000558155 ATN1P54259 1190 aaPredicted RBP7.13□□□□□ -1.27
SPG11-208ENST00000558155 INTS5Q6P9B9 1019 aaKnown RBP7.13□□□□□ -1.27
SPG11-208ENST00000558155 C2CD5Q86YS7 1000 aa7.13□□□□□ -1.27
SPG11-208ENST00000558155 AIDAQ96BJ3 306 aa7.13□□□□□ -1.27
SPG11-208ENST00000558155 PRDM10Q9NQV6 1147 aa7.13□□□□□ -1.27
SPG11-208ENST00000558155 PDZRN3Q9UPQ7 1066 aa7.13□□□□□ -1.27
SPG11-208ENST00000558155 TRPC6Q9Y210 931 aa7.13□□□□□ -1.27
SPG11-208ENST00000558155 KDM6AO15550 1401 aaPredicted RBP7.12□□□□□ -1.27
SPG11-208ENST00000558155 POTECB2RU33 542 aa7.12□□□□□ -1.27
SPG11-208ENST00000558155 TNNT2P45379 298 aaPredicted RBP7.12□□□□□ -1.27
SPG11-208ENST00000558155 CTCFP49711 727 aaPredicted RBP7.12□□□□□ -1.27
SPG11-208ENST00000558155 NFIXQ14938 502 aa7.12□□□□□ -1.27
SPG11-208ENST00000558155 ERFEQ4G0M1 354 aa7.12□□□□□ -1.27
SPG11-208ENST00000558155 ZNF622Q969S3 477 aaKnown RBP eCLIP7.12□□□□□ -1.273e-10■□□□□ 9.2
SPG11-208ENST00000558155 MKRN1Q9UHC7 482 aaKnown RBP7.12□□□□□ -1.27
SPG11-208ENST00000558155 NARFQ9UHQ1 456 aa7.12□□□□□ -1.27
SPG11-208ENST00000558155 COL5A3P25940 1745 aaPredicted RBP7.12□□□□□ -1.27
SPG11-208ENST00000558155 PDE6BP35913 854 aa7.11□□□□□ -1.27
SPG11-208ENST00000558155 DNAJC10Q8IXB1 793 aa7.11□□□□□ -1.27
SPG11-208ENST00000558155 TSPYL2Q9H2G4 693 aaPredicted RBP7.11□□□□□ -1.27
SPG11-208ENST00000558155 SOS1Q07889 1333 aaPredicted RBP7.1□□□□□ -1.27
SPG11-208ENST00000558155 A0A087WZG4 1122 aa7.1□□□□□ -1.27
SPG11-208ENST00000558155 NFKBIEO00221 500 aa7.1□□□□□ -1.27
SPG11-208ENST00000558155 FOXN1O15353 648 aa7.1□□□□□ -1.27
SPG11-208ENST00000558155 CYP19A1P11511 503 aaPredicted RBP7.1□□□□□ -1.27
SPG11-208ENST00000558155 IQCA1LA6NCM1 817 aa7.09□□□□□ -1.27
SPG11-208ENST00000558155 C21orf2O43822 256 aa7.09□□□□□ -1.27
SPG11-208ENST00000558155 SLC34A2O95436 690 aa7.09□□□□□ -1.27
SPG11-208ENST00000558155 AKAP4Q5JQC9 854 aa7.09□□□□□ -1.27
SPG11-208ENST00000558155 SULT6B1Q6IMI4 303 aa7.09□□□□□ -1.27
SPG11-208ENST00000558155 BICDL1Q6ZP65 573 aa7.09□□□□□ -1.27
SPG11-208ENST00000558155 CNKSR1Q969H4 720 aa7.09□□□□□ -1.27
SPG11-208ENST00000558155 KIF12Q96FN5 646 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms