RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 BCS1LQ9Y276 419 aa22.09■■□□□ 1.13
RPL28-205ENST00000558131 CEMIPQ8WUJ3 1361 aa22.09■■□□□ 1.13
RPL28-205ENST00000558131 USPL1Q5W0Q7 1092 aa22.08■■□□□ 1.13
RPL28-205ENST00000558131 VSIG10Q8N0Z9 540 aa22.08■■□□□ 1.13
RPL28-205ENST00000558131 IL17REQ8NFR9 667 aa22.08■■□□□ 1.13
RPL28-205ENST00000558131 ZNF526Q8TF50 670 aaPredicted RBP22.08■■□□□ 1.13
RPL28-205ENST00000558131 COL11A2P13942 1736 aaPredicted RBP22.08■■□□□ 1.12
RPL28-205ENST00000558131 CNGB1Q14028 1251 aaPredicted RBP22.07■■□□□ 1.12
RPL28-205ENST00000558131 BCL2L12Q9HB09 334 aa22.07■■□□□ 1.12
RPL28-205ENST00000558131 U2SURPO15042 1029 aaKnown RBP22.06■■□□□ 1.12
RPL28-205ENST00000558131 KIF3CO14782 793 aa22.05■■□□□ 1.12
RPL28-205ENST00000558131 RSPH6AQ9H0K4 717 aa22.05■■□□□ 1.12
RPL28-205ENST00000558131 NARFQ9UHQ1 456 aa22.05■■□□□ 1.12
RPL28-205ENST00000558131 PHACTR3Q96KR7 559 aa22.04■■□□□ 1.12
RPL28-205ENST00000558131 DLG5Q8TDM6 1919 aa22.04■■□□□ 1.12
RPL28-205ENST00000558131 CARMIL3Q8ND23 1372 aa22.03■■□□□ 1.12
RPL28-205ENST00000558131 HEG1Q9ULI3 1381 aa22.03■■□□□ 1.12
RPL28-205ENST00000558131 FCHSD2O94868 740 aa22.03■■□□□ 1.12
RPL28-205ENST00000558131 ZNF496Q96IT1 587 aaPredicted RBP22.03■■□□□ 1.12
RPL28-205ENST00000558131 GNAT3A8MTJ3 354 aa22.02■■□□□ 1.12
RPL28-205ENST00000558131 CHRNA5P30532 468 aa22.02■■□□□ 1.12
RPL28-205ENST00000558131 NFIXQ14938 502 aa22.02■■□□□ 1.12
RPL28-205ENST00000558131 GAS2L2Q8NHY3 880 aa22.02■■□□□ 1.12
RPL28-205ENST00000558131 TIAM2Q8IVF5 1701 aa22.02■■□□□ 1.12
RPL28-205ENST00000558131 ZPR1O75312 459 aa22.01■■□□□ 1.11
RPL28-205ENST00000558131 EIF5P55010 431 aaKnown RBP22.01■■□□□ 1.11
RPL28-205ENST00000558131 ZNF790Q6PG37 636 aa22.01■■□□□ 1.11
RPL28-205ENST00000558131 TNRC6CQ9HCJ0 1690 aaKnown RBP22.01■■□□□ 1.11
RPL28-205ENST00000558131 LAMB4A4D0S4 1761 aa22■■□□□ 1.11
RPL28-205ENST00000558131 PIM2Q9P1W9 311 aa22■■□□□ 1.11
RPL28-205ENST00000558131 PPP2R1AP30153 589 aa21.99■■□□□ 1.11
RPL28-205ENST00000558131 PRKAR2BP31323 418 aa21.99■■□□□ 1.11
RPL28-205ENST00000558131 ARHGAP27Q6ZUM4 889 aa21.99■■□□□ 1.11
RPL28-205ENST00000558131 KDM3BQ7LBC6 1761 aa21.99■■□□□ 1.11
RPL28-205ENST00000558131 ARFGEF2Q9Y6D5 1785 aa21.99■■□□□ 1.11
RPL28-205ENST00000558131 CCDC88AQ3V6T2 1871 aa21.98■■□□□ 1.11
RPL28-205ENST00000558131 CANXP27824 592 aaKnown RBP21.98■■□□□ 1.11
RPL28-205ENST00000558131 TTC5Q8N0Z6 440 aa21.98■■□□□ 1.11
RPL28-205ENST00000558131 CACNA1SQ13698 1873 aa21.98■■□□□ 1.11
RPL28-205ENST00000558131 TEFQ10587 303 aa21.97■■□□□ 1.11
RPL28-205ENST00000558131 KCNQ3O43525 872 aa21.96■■□□□ 1.11
RPL28-205ENST00000558131 DALRD3Q5D0E6 543 aaKnown RBP21.96■■□□□ 1.11
RPL28-205ENST00000558131 HSPA6P17066 643 aa21.95■■□□□ 1.1
RPL28-205ENST00000558131 FER1L6Q2WGJ9 1857 aa21.94■■□□□ 1.1
RPL28-205ENST00000558131 STARD3NLO95772 234 aa21.94■■□□□ 1.1
RPL28-205ENST00000558131 SERPINB2P05120 415 aa21.94■■□□□ 1.1
RPL28-205ENST00000558131 C9orf131Q5VYM1 1079 aa21.94■■□□□ 1.1
RPL28-205ENST00000558131 CFAP53Q96M91 514 aa21.94■■□□□ 1.1
RPL28-205ENST00000558131 WDR90Q96KV7 1748 aa21.93■■□□□ 1.1
RPL28-205ENST00000558131 NMRK2Q9NPI5 230 aa21.93■■□□□ 1.1
RPL28-205ENST00000558131 PRELPP51888 382 aa21.92■■□□□ 1.1
RPL28-205ENST00000558131 TBC1D9BQ66K14 1250 aa21.92■■□□□ 1.1
RPL28-205ENST00000558131 FMNL2Q96PY5 1086 aa21.92■■□□□ 1.1
RPL28-205ENST00000558131 DICER1Q9UPY3 1922 aaKnown RBP21.92■■□□□ 1.1
RPL28-205ENST00000558131 IL6STP40189 918 aaPredicted RBP21.91■■□□□ 1.1
RPL28-205ENST00000558131 PRAMEF22A3QJZ6 481 aa21.9■■□□□ 1.1
RPL28-205ENST00000558131 BTBD11A6QL63 1104 aa21.9■■□□□ 1.1
RPL28-205ENST00000558131 A1BGP04217 495 aa21.9■■□□□ 1.1
RPL28-205ENST00000558131 TEX13AQ9BXU3 409 aaPredicted RBP21.9■■□□□ 1.1
RPL28-205ENST00000558131 A0A087WZG4 1122 aa21.89■■□□□ 1.09
RPL28-205ENST00000558131 CAMTA2O94983 1202 aa21.89■■□□□ 1.09
RPL28-205ENST00000558131 U2AF1L5P0DN76 240 aaPredicted RBP21.89■■□□□ 1.09
RPL28-205ENST00000558131 U2AF1Q01081 240 aaKnown RBP eCLIP21.89■■□□□ 1.09
RPL28-205ENST00000558131 RASSF7Q02833 373 aa21.89■■□□□ 1.09
RPL28-205ENST00000558131 MCM10Q7L590 875 aa21.89■■□□□ 1.09
RPL28-205ENST00000558131 TBC1D2BQ9UPU7 963 aa21.89■■□□□ 1.09
RPL28-205ENST00000558131 BICDL1Q6ZP65 573 aa21.88■■□□□ 1.09
RPL28-205ENST00000558131 RNF181Q9P0P0 153 aa21.88■■□□□ 1.09
RPL28-205ENST00000558131 NUDCQ9Y266 331 aa21.88■■□□□ 1.09
RPL28-205ENST00000558131 SLX4Q8IY92 1834 aa21.87■■□□□ 1.09
RPL28-205ENST00000558131 PRR5LQ6MZQ0 368 aa21.87■■□□□ 1.09
RPL28-205ENST00000558131 USP16Q9Y5T5 823 aa21.87■■□□□ 1.09
RPL28-205ENST00000558131 TOMM70O94826 608 aa21.86■■□□□ 1.09
RPL28-205ENST00000558131 DCTN1Q14203 1278 aa21.86■■□□□ 1.09
RPL28-205ENST00000558131 PIP4K2AP48426 406 aaPredicted RBP21.85■■□□□ 1.09
RPL28-205ENST00000558131 C2CD5Q86YS7 1000 aa21.85■■□□□ 1.09
RPL28-205ENST00000558131 ZNF330Q9Y3S2 320 aaPredicted RBP21.85■■□□□ 1.09
RPL28-205ENST00000558131 NFKBIEO00221 500 aa21.84■■□□□ 1.09
RPL28-205ENST00000558131 CCDC24Q8N4L8 307 aa21.83■■□□□ 1.09
RPL28-205ENST00000558131 TTLL6Q8N841 843 aa21.83■■□□□ 1.09
RPL28-205ENST00000558131 ZC3H4Q9UPT8 1303 aaKnown RBP21.82■■□□□ 1.08
RPL28-205ENST00000558131 HTATSF1O43719 755 aaKnown RBP21.82■■□□□ 1.08
RPL28-205ENST00000558131 BRIP1Q9BX63 1249 aa21.82■■□□□ 1.08
RPL28-205ENST00000558131 PCNTO95613 3336 aa21.82■■□□□ 1.08
RPL28-205ENST00000558131 NUP98P52948 1817 aa21.82■■□□□ 1.08
RPL28-205ENST00000558131 NBPF26B4DH59 902 aa21.81■■□□□ 1.08
RPL28-205ENST00000558131 H0YIN7 160 aa21.81■■□□□ 1.08
RPL28-205ENST00000558131 NBPF10Q6P3W6 841 aaKnown RBP21.81■■□□□ 1.08
RPL28-205ENST00000558131 DZIP3Q86Y13 1208 aaKnown RBP21.81■■□□□ 1.08
RPL28-205ENST00000558131 NBPF15Q8N660 670 aa21.81■■□□□ 1.08
RPL28-205ENST00000558131 PLEKHF1Q96S99 279 aa21.81■■□□□ 1.08
RPL28-205ENST00000558131 RBM46Q8TBY0 533 aaKnown RBP21.8■■□□□ 1.08
RPL28-205ENST00000558131 RTF1Q92541 710 aaKnown RBP21.8■■□□□ 1.08
RPL28-205ENST00000558131 SNRPA1P09661 255 aaKnown RBP21.79■■□□□ 1.08
RPL28-205ENST00000558131 LMNB1P20700 586 aa21.79■■□□□ 1.08
RPL28-205ENST00000558131 KDM2BQ8NHM5 1336 aa21.79■■□□□ 1.08
RPL28-205ENST00000558131 PDE6BP35913 854 aa21.77■■□□□ 1.08
RPL28-205ENST00000558131 CNBD1Q8NA66 436 aa21.77■■□□□ 1.08
RPL28-205ENST00000558131 SETDB2Q96T68 719 aa21.77■■□□□ 1.08
RPL28-205ENST00000558131 APLP1P51693 650 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms