RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 PAXIP1Q6ZW49 1069 aaPredicted RBP13.81□□□□□ -0.2
IGKV2D-28-202ENST00000558026 USP42Q9H9J4 1324 aaKnown RBP13.81□□□□□ -0.2
IGKV2D-28-202ENST00000558026 A0A1W2PP64 1363 aa13.81□□□□□ -0.2
IGKV2D-28-202ENST00000558026 SCN4AP35499 1836 aa13.8□□□□□ -0.2
IGKV2D-28-202ENST00000558026 FER1L6Q2WGJ9 1857 aa13.8□□□□□ -0.2
IGKV2D-28-202ENST00000558026 TM4SF1P30408 202 aa13.8□□□□□ -0.2
IGKV2D-28-202ENST00000558026 MAP1SQ66K74 1059 aaPredicted RBP13.8□□□□□ -0.2
IGKV2D-28-202ENST00000558026 CYP4F22Q6NT55 531 aa13.8□□□□□ -0.2
IGKV2D-28-202ENST00000558026 GPR101Q96P66 508 aaPredicted RBP13.8□□□□□ -0.2
IGKV2D-28-202ENST00000558026 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
IGKV2D-28-202ENST00000558026 ADAMTSL1Q8N6G6 1762 aa13.8□□□□□ -0.2
IGKV2D-28-202ENST00000558026 COG3Q96JB2 828 aa13.79□□□□□ -0.2
IGKV2D-28-202ENST00000558026 RTL1A6NKG5 1358 aa13.79□□□□□ -0.2
IGKV2D-28-202ENST00000558026 SMG6Q86US8 1419 aaKnown RBP13.79□□□□□ -0.2
IGKV2D-28-202ENST00000558026 ZNF831Q5JPB2 1677 aa13.79□□□□□ -0.2
IGKV2D-28-202ENST00000558026 IQCA1LA6NCM1 817 aa13.78□□□□□ -0.2
IGKV2D-28-202ENST00000558026 AOC2O75106 756 aa13.78□□□□□ -0.2
IGKV2D-28-202ENST00000558026 FMR1Q06787 632 aaKnown RBP eCLIP13.78□□□□□ -0.2
IGKV2D-28-202ENST00000558026 HSP90AB2PQ58FF8 381 aa13.78□□□□□ -0.2
IGKV2D-28-202ENST00000558026 C2CD5Q86YS7 1000 aa13.78□□□□□ -0.2
IGKV2D-28-202ENST00000558026 CNTROBQ8N137 903 aa13.78□□□□□ -0.2
IGKV2D-28-202ENST00000558026 C21orf2O43822 256 aa13.77□□□□□ -0.21
IGKV2D-28-202ENST00000558026 ADAMTS7Q9UKP4 1686 aa13.76□□□□□ -0.21
IGKV2D-28-202ENST00000558026 CARMIL3Q8ND23 1372 aa13.76□□□□□ -0.21
IGKV2D-28-202ENST00000558026 CRKLP46109 303 aaKnown RBP13.76□□□□□ -0.21
IGKV2D-28-202ENST00000558026 L3MBTL3Q96JM7 780 aaPredicted RBP13.76□□□□□ -0.21
IGKV2D-28-202ENST00000558026 NRXN2Q9P2S2 1712 aa13.76□□□□□ -0.21
IGKV2D-28-202ENST00000558026 ECE1P42892 770 aa13.75□□□□□ -0.21
IGKV2D-28-202ENST00000558026 TERF2IPQ9NYB0 399 aa13.75□□□□□ -0.21
IGKV2D-28-202ENST00000558026 NFIXQ14938 502 aa13.74□□□□□ -0.21
IGKV2D-28-202ENST00000558026 USPL1Q5W0Q7 1092 aa13.74□□□□□ -0.21
IGKV2D-28-202ENST00000558026 DDX21Q9NR30 783 aaKnown RBP eCLIP13.74□□□□□ -0.21
IGKV2D-28-202ENST00000558026 SPG7Q9UQ90 795 aa13.74□□□□□ -0.21
IGKV2D-28-202ENST00000558026 H0YIN7 160 aa13.73□□□□□ -0.21
IGKV2D-28-202ENST00000558026 PHKG2P15735 406 aa13.73□□□□□ -0.21
IGKV2D-28-202ENST00000558026 EPHX2P34913 555 aa13.73□□□□□ -0.21
IGKV2D-28-202ENST00000558026 TAOK3Q9H2K8 898 aa13.73□□□□□ -0.21
IGKV2D-28-202ENST00000558026 INSRP06213 1382 aa13.72□□□□□ -0.21
IGKV2D-28-202ENST00000558026 ZNF541Q9H0D2 1346 aa13.72□□□□□ -0.21
IGKV2D-28-202ENST00000558026 HABP4Q5JVS0 413 aaKnown RBP13.72□□□□□ -0.21
IGKV2D-28-202ENST00000558026 ZNF622Q969S3 477 aaKnown RBP eCLIP13.72□□□□□ -0.21
IGKV2D-28-202ENST00000558026 HACL1Q9UJ83 578 aa13.72□□□□□ -0.21
IGKV2D-28-202ENST00000558026 CACNA1SQ13698 1873 aa13.72□□□□□ -0.21
IGKV2D-28-202ENST00000558026 ANKRD31Q8N7Z5 1873 aa13.72□□□□□ -0.21
IGKV2D-28-202ENST00000558026 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.21
IGKV2D-28-202ENST00000558026 COL11A2P13942 1736 aaPredicted RBP13.71□□□□□ -0.21
IGKV2D-28-202ENST00000558026 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.21
IGKV2D-28-202ENST00000558026 SERPINB2P05120 415 aa13.71□□□□□ -0.21
IGKV2D-28-202ENST00000558026 RNF123Q5XPI4 1314 aa13.7□□□□□ -0.22
IGKV2D-28-202ENST00000558026 ZPR1O75312 459 aa13.7□□□□□ -0.22
IGKV2D-28-202ENST00000558026 MAP2K2P36507 400 aa13.7□□□□□ -0.22
IGKV2D-28-202ENST00000558026 TJP1Q07157 1748 aa13.7□□□□□ -0.22
IGKV2D-28-202ENST00000558026 TRPM7Q96QT4 1865 aa13.7□□□□□ -0.22
IGKV2D-28-202ENST00000558026 SLX4Q8IY92 1834 aa13.69□□□□□ -0.22
IGKV2D-28-202ENST00000558026 CA12O43570 354 aa13.69□□□□□ -0.22
IGKV2D-28-202ENST00000558026 CST9Q5W186 159 aa13.69□□□□□ -0.22
IGKV2D-28-202ENST00000558026 INTS5Q6P9B9 1019 aaKnown RBP13.69□□□□□ -0.22
IGKV2D-28-202ENST00000558026 IFNL2Q8IZJ0 200 aa13.69□□□□□ -0.22
IGKV2D-28-202ENST00000558026 ROCK2O75116 1388 aaKnown RBP13.69□□□□□ -0.22
IGKV2D-28-202ENST00000558026 NCAPD2Q15021 1401 aa13.68□□□□□ -0.22
IGKV2D-28-202ENST00000558026 TRAF5O00463 557 aa13.68□□□□□ -0.22
IGKV2D-28-202ENST00000558026 CCDC24Q8N4L8 307 aa13.68□□□□□ -0.22
IGKV2D-28-202ENST00000558026 GCC1Q96CN9 775 aa13.68□□□□□ -0.22
IGKV2D-28-202ENST00000558026 GGNBP2Q9H3C7 697 aa13.68□□□□□ -0.22
IGKV2D-28-202ENST00000558026 CIAPIN1Q6FI81 312 aa13.67□□□□□ -0.22
IGKV2D-28-202ENST00000558026 PNMA8AQ86V59 439 aaPredicted RBP13.67□□□□□ -0.22
IGKV2D-28-202ENST00000558026 TLL2Q9Y6L7 1015 aa13.67□□□□□ -0.22
IGKV2D-28-202ENST00000558026 FLT4P35916 1363 aa13.67□□□□□ -0.22
IGKV2D-28-202ENST00000558026 BCL2L12Q9HB09 334 aa13.66□□□□□ -0.22
IGKV2D-28-202ENST00000558026 BRPF1P55201 1214 aaPredicted RBP13.65□□□□□ -0.22
IGKV2D-28-202ENST00000558026 BICDL1Q6ZP65 573 aa13.65□□□□□ -0.22
IGKV2D-28-202ENST00000558026 ZIC5Q96T25 663 aa13.65□□□□□ -0.22
IGKV2D-28-202ENST00000558026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.65□□□□□ -0.22
IGKV2D-28-202ENST00000558026 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
IGKV2D-28-202ENST00000558026 DLL1O00548 723 aa13.64□□□□□ -0.23
IGKV2D-28-202ENST00000558026 NBPF15Q8N660 670 aa13.64□□□□□ -0.23
IGKV2D-28-202ENST00000558026 SOS1Q07889 1333 aaPredicted RBP13.64□□□□□ -0.23
IGKV2D-28-202ENST00000558026 TONSLQ96HA7 1378 aa13.63□□□□□ -0.23
IGKV2D-28-202ENST00000558026 FYB1O15117 783 aa13.63□□□□□ -0.23
IGKV2D-28-202ENST00000558026 FXR1P51114 621 aaKnown RBP eCLIP13.63□□□□□ -0.23
IGKV2D-28-202ENST00000558026 L3MBTL2Q969R5 705 aa13.63□□□□□ -0.23
IGKV2D-28-202ENST00000558026 NARFQ9UHQ1 456 aa13.63□□□□□ -0.23
IGKV2D-28-202ENST00000558026 EMILIN1Q9Y6C2 1016 aa13.63□□□□□ -0.23
IGKV2D-28-202ENST00000558026 CABP4P57796 275 aa13.62□□□□□ -0.23
IGKV2D-28-202ENST00000558026 PRPF40BQ6NWY9 871 aaKnown RBP13.62□□□□□ -0.23
IGKV2D-28-202ENST00000558026 EYA1Q99502 592 aa13.62□□□□□ -0.23
IGKV2D-28-202ENST00000558026 ZNF277Q9NRM2 450 aaPredicted RBP13.62□□□□□ -0.23
IGKV2D-28-202ENST00000558026 SAPCD2Q86UD0 394 aa13.61□□□□□ -0.23
IGKV2D-28-202ENST00000558026 COL15A1P39059 1388 aa13.6□□□□□ -0.23
IGKV2D-28-202ENST00000558026 DNAJC10Q8IXB1 793 aa13.6□□□□□ -0.23
IGKV2D-28-202ENST00000558026 BRIP1Q9BX63 1249 aa13.6□□□□□ -0.23
IGKV2D-28-202ENST00000558026 ARFGEF2Q9Y6D5 1785 aa13.6□□□□□ -0.23
IGKV2D-28-202ENST00000558026 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
IGKV2D-28-202ENST00000558026 PDE6BP35913 854 aa13.59□□□□□ -0.23
IGKV2D-28-202ENST00000558026 OLFM4Q6UX06 510 aa13.59□□□□□ -0.23
IGKV2D-28-202ENST00000558026 KIF24Q5T7B8 1368 aa13.58□□□□□ -0.23
IGKV2D-28-202ENST00000558026 CELF2O95319 508 aaKnown RBP13.58□□□□□ -0.24
IGKV2D-28-202ENST00000558026 PRR5LQ6MZQ0 368 aa13.58□□□□□ -0.24
IGKV2D-28-202ENST00000558026 CNKSR1Q969H4 720 aa13.58□□□□□ -0.24
IGKV2D-28-202ENST00000558026 FZD9O00144 591 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms