RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 EGFLAMQ63HQ2 1017 aa5.43□□□□□ -1.54
TDP1-217ENST00000557782 CC2D2BQ6DHV5 1058 aa5.43□□□□□ -1.54
TDP1-217ENST00000557782 PPP1R18Q6NYC8 613 aa5.43□□□□□ -1.54
TDP1-217ENST00000557782 NOL8Q76FK4 1167 aaKnown RBP5.43□□□□□ -1.54
TDP1-217ENST00000557782 USP48Q86UV5 1035 aa5.43□□□□□ -1.54
TDP1-217ENST00000557782 STAC3Q96MF2 364 aa5.43□□□□□ -1.54
TDP1-217ENST00000557782 KCTD15Q96SI1 283 aaPredicted RBP5.43□□□□□ -1.54
TDP1-217ENST00000557782 SETDB2Q96T68 719 aa5.43□□□□□ -1.54
TDP1-217ENST00000557782 SPG7Q9UQ90 795 aa5.43□□□□□ -1.54
TDP1-217ENST00000557782 TBX22Q9Y458 520 aa5.43□□□□□ -1.54
TDP1-217ENST00000557782 AK5Q9Y6K8 562 aa5.43□□□□□ -1.54
TDP1-217ENST00000557782 A0A1W2PRU2 124 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 INHAP05111 366 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 NEFLP07196 543 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 IBSPP21815 317 aaPredicted RBP5.42□□□□□ -1.54
TDP1-217ENST00000557782 SCTRP47872 440 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 SCNN1DP51172 638 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 EPHA4P54764 986 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 NFE2L2Q16236 605 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 C4orf48Q5BLP8 95 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 HS2ST1Q7LGA3 356 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 GJD3Q8N144 294 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 MYO19Q96H55 970 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 C2orf49Q9BVC5 232 aaPredicted RBP5.42□□□□□ -1.54
TDP1-217ENST00000557782 PIF1Q9H611 641 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 SERTAD1Q9UHV2 236 aa5.42□□□□□ -1.54
TDP1-217ENST00000557782 DDX41Q9UJV9 622 aaKnown RBP5.42□□□□□ -1.54
TDP1-217ENST00000557782 ARID4BQ4LE39 1312 aaPredicted RBP5.42□□□□□ -1.54
TDP1-217ENST00000557782 PCSK2P16519 638 aa5.41□□□□□ -1.54
TDP1-217ENST00000557782 EIF4BP23588 611 aaKnown RBP5.41□□□□□ -1.54
TDP1-217ENST00000557782 MZF1P28698 734 aaPredicted RBP5.41□□□□□ -1.54
TDP1-217ENST00000557782 BCAMP50895 628 aa5.41□□□□□ -1.54
TDP1-217ENST00000557782 PSMA6P60900 246 aaKnown RBP5.41□□□□□ -1.54
TDP1-217ENST00000557782 COPS2P61201 443 aa5.41□□□□□ -1.54
TDP1-217ENST00000557782 ERVK-9P63128 1117 aa5.41□□□□□ -1.54
TDP1-217ENST00000557782 IGBP1P78318 339 aa5.41□□□□□ -1.54
TDP1-217ENST00000557782 ZNF394Q53GI3 561 aa5.41□□□□□ -1.54
TDP1-217ENST00000557782 CSRNP1Q96S65 589 aa5.41□□□□□ -1.54
TDP1-217ENST00000557782 POLIQ9UNA4 740 aa5.41□□□□□ -1.54
TDP1-217ENST00000557782 hCG_2014768A0A024R1R8 64 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 ERVH48-1M5A8F1 160 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 ZBTB24O43167 697 aaPredicted RBP5.4□□□□□ -1.54
TDP1-217ENST00000557782 MARCH6O60337 910 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 DNM1Q05193 864 aaKnown RBP5.4□□□□□ -1.54
TDP1-217ENST00000557782 PTPN12Q05209 780 aaKnown RBP5.4□□□□□ -1.54
TDP1-217ENST00000557782 BMS1Q14692 1282 aaKnown RBP5.4□□□□□ -1.54
TDP1-217ENST00000557782 PTPROQ16827 1216 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 ESCO1Q5FWF5 840 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 INTS6LQ5JSJ4 861 aaKnown RBP5.4□□□□□ -1.54
TDP1-217ENST00000557782 POTEHQ6S545 545 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 SLC9A9Q8IVB4 645 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 ZNF687Q8N1G0 1237 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 MICAL1Q8TDZ2 1067 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 MRFAP1L1Q96HT8 127 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 SLC4A9Q96Q91 983 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.4□□□□□ -1.54
TDP1-217ENST00000557782 OSBPL3Q9H4L5 887 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 QTRT2Q9H974 415 aaKnown RBP5.4□□□□□ -1.54
TDP1-217ENST00000557782 PCDHGB7Q9Y5F8 929 aa5.4□□□□□ -1.54
TDP1-217ENST00000557782 TLL1O43897 1013 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 CTSHP09668 335 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 RACK1P63244 317 aaKnown RBP5.39□□□□□ -1.55
TDP1-217ENST00000557782 RNF187Q5TA31 235 aaPredicted RBP5.39□□□□□ -1.55
TDP1-217ENST00000557782 ZNF746Q6NUN9 644 aaPredicted RBP5.39□□□□□ -1.55
TDP1-217ENST00000557782 VASH1Q7L8A9 365 aaPredicted RBP5.39□□□□□ -1.55
TDP1-217ENST00000557782 CYP2U1Q7Z449 544 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 ATCAYQ86WG3 371 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 MCF2L2Q86YR7 1114 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 CKAP2LQ8IYA6 745 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 NLGN1Q8N2Q7 840 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 TTC16Q8NEE8 873 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 ZCRB1Q8TBF4 217 aaKnown RBP5.39□□□□□ -1.55
TDP1-217ENST00000557782 EDEM1Q92611 657 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 SPACA7Q96KW9 195 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 SLC6A16Q9GZN6 736 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 DNAJC25Q9H1X3 360 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 ETNK1Q9HBU6 452 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 METTL14Q9HCE5 456 aaKnown RBP5.39□□□□□ -1.55
TDP1-217ENST00000557782 SCHIP1Q9P0W5 487 aaPredicted RBP5.39□□□□□ -1.55
TDP1-217ENST00000557782 MAP4K5Q9Y4K4 846 aa5.39□□□□□ -1.55
TDP1-217ENST00000557782 A6NJY4 79 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 RAB11FIP3O75154 756 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 ZPR1O75312 459 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 PDGFAP04085 211 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 FGRP09769 529 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 HSD3B2P26439 372 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 FOXK2Q01167 660 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 NBPF6Q5VWK0 638 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 ADGRD1Q6QNK2 874 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 KCNB2Q92953 911 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 WNT2BQ93097 391 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 NBPF4Q96M43 638 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 CFHR5Q9BXR6 569 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 GGT7Q9UJ14 662 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 LRFN2Q9ULH4 789 aa5.38□□□□□ -1.55
TDP1-217ENST00000557782 POTEB2H3BUK9 544 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 EIF1AYO14602 144 aaKnown RBP5.37□□□□□ -1.55
TDP1-217ENST00000557782 GIPC1O14908 333 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 ZBTB39O15060 712 aa5.37□□□□□ -1.55
TDP1-217ENST00000557782 GNRH1P01148 92 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms