RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 FMNL2Q96PY5 1086 aa13.07□□□□□ -0.32
GABRB3-212ENST00000557641 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
GABRB3-212ENST00000557641 NOB1Q9ULX3 412 aaKnown RBP13.07□□□□□ -0.32
GABRB3-212ENST00000557641 PTPRCP08575 1304 aa13.07□□□□□ -0.32
GABRB3-212ENST00000557641 KDM3BQ7LBC6 1761 aa13.07□□□□□ -0.32
GABRB3-212ENST00000557641 WNK3Q9BYP7 1800 aa13.06□□□□□ -0.32
GABRB3-212ENST00000557641 FAM98CQ17RN3 349 aaKnown RBP13.06□□□□□ -0.32
GABRB3-212ENST00000557641 HDGFL1Q5TGJ6 251 aa13.06□□□□□ -0.32
GABRB3-212ENST00000557641 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
GABRB3-212ENST00000557641 FTSJ3Q8IY81 847 aaKnown RBP13.06□□□□□ -0.32
GABRB3-212ENST00000557641 SIPA1L3O60292 1781 aaPredicted RBP13.06□□□□□ -0.32
GABRB3-212ENST00000557641 SHANK3Q9BYB0 1731 aa13.05□□□□□ -0.32
GABRB3-212ENST00000557641 KCNQ3O43525 872 aa13.05□□□□□ -0.32
GABRB3-212ENST00000557641 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
GABRB3-212ENST00000557641 ZNF772Q68DY9 489 aaPredicted RBP13.05□□□□□ -0.32
GABRB3-212ENST00000557641 CHMP4BQ9H444 224 aaKnown RBP13.05□□□□□ -0.32
GABRB3-212ENST00000557641 QTRT2Q9H974 415 aaKnown RBP13.05□□□□□ -0.32
GABRB3-212ENST00000557641 TRIM27P14373 513 aa13.04□□□□□ -0.32
GABRB3-212ENST00000557641 SLC39A6Q13433 755 aa13.04□□□□□ -0.32
GABRB3-212ENST00000557641 C20orf194Q5TEA3 1177 aa13.04□□□□□ -0.32
GABRB3-212ENST00000557641 MARCH10Q8NA82 808 aaPredicted RBP13.04□□□□□ -0.32
GABRB3-212ENST00000557641 EXOC6Q8TAG9 804 aa13.04□□□□□ -0.32
GABRB3-212ENST00000557641 CRBNQ96SW2 442 aa13.04□□□□□ -0.32
GABRB3-212ENST00000557641 DBF4Q9UBU7 674 aaPredicted RBP13.04□□□□□ -0.32
GABRB3-212ENST00000557641 VSIG10Q8N0Z9 540 aa13.03□□□□□ -0.32
GABRB3-212ENST00000557641 ZNF496Q96IT1 587 aaPredicted RBP13.03□□□□□ -0.32
GABRB3-212ENST00000557641 TEX13AQ9BXU3 409 aaPredicted RBP13.03□□□□□ -0.32
GABRB3-212ENST00000557641 BCL9O00512 1426 aa13.03□□□□□ -0.32
GABRB3-212ENST00000557641 MVPQ14764 893 aaKnown RBP13.02□□□□□ -0.33
GABRB3-212ENST00000557641 PIGBQ92521 554 aa13.02□□□□□ -0.33
GABRB3-212ENST00000557641 DDX19BQ9UMR2 479 aa13.02□□□□□ -0.33
GABRB3-212ENST00000557641 ERBB4Q15303 1308 aa13.02□□□□□ -0.33
GABRB3-212ENST00000557641 A0A0G2JS52 829 aa13.01□□□□□ -0.33
GABRB3-212ENST00000557641 TCERG1O14776 1098 aaKnown RBP13.01□□□□□ -0.33
GABRB3-212ENST00000557641 EIF2S2P20042 333 aaKnown RBP13.01□□□□□ -0.33
GABRB3-212ENST00000557641 MYT1Q01538 1121 aa13.01□□□□□ -0.33
GABRB3-212ENST00000557641 PANK1Q8TE04 598 aa13.01□□□□□ -0.33
GABRB3-212ENST00000557641 HYPKQ9NX55 129 aa13.01□□□□□ -0.33
GABRB3-212ENST00000557641 ABCC4O15439 1325 aa13.01□□□□□ -0.33
GABRB3-212ENST00000557641 THSD7AQ9UPZ6 1657 aa13.01□□□□□ -0.33
GABRB3-212ENST00000557641 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
GABRB3-212ENST00000557641 GLI3P10071 1580 aa13□□□□□ -0.33
GABRB3-212ENST00000557641 RLBP1P12271 317 aa13□□□□□ -0.33
GABRB3-212ENST00000557641 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
GABRB3-212ENST00000557641 FLIIQ13045 1269 aa13□□□□□ -0.33
GABRB3-212ENST00000557641 CLUAP1Q96AJ1 413 aa13□□□□□ -0.33
GABRB3-212ENST00000557641 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
GABRB3-212ENST00000557641 COG6Q9Y2V7 657 aa13□□□□□ -0.33
GABRB3-212ENST00000557641 RBM6P78332 1123 aaKnown RBP12.99□□□□□ -0.33
GABRB3-212ENST00000557641 SEPT12Q8IYM1 358 aa12.99□□□□□ -0.33
GABRB3-212ENST00000557641 SMARCC1Q92922 1105 aaPredicted RBP12.99□□□□□ -0.33
GABRB3-212ENST00000557641 CCDC136Q96JN2 1154 aa12.99□□□□□ -0.33
GABRB3-212ENST00000557641 ATG3Q9NT62 314 aa12.99□□□□□ -0.33
GABRB3-212ENST00000557641 INTS3Q68E01 1043 aaKnown RBP12.98□□□□□ -0.33
GABRB3-212ENST00000557641 NECTIN2Q92692 538 aa12.98□□□□□ -0.33
GABRB3-212ENST00000557641 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
GABRB3-212ENST00000557641 CHPF2Q9P2E5 772 aa12.98□□□□□ -0.33
GABRB3-212ENST00000557641 PAPPAQ13219 1627 aa12.98□□□□□ -0.33
GABRB3-212ENST00000557641 KCPQ6ZWJ8 1503 aa12.98□□□□□ -0.33
GABRB3-212ENST00000557641 TOGARAM1Q9Y4F4 1720 aa12.97□□□□□ -0.33
GABRB3-212ENST00000557641 HAX1O00165 279 aa12.97□□□□□ -0.33
GABRB3-212ENST00000557641 DDX58O95786 925 aaKnown RBP12.97□□□□□ -0.33
GABRB3-212ENST00000557641 CCT4P50991 539 aaKnown RBP12.97□□□□□ -0.33
GABRB3-212ENST00000557641 FKBP5Q13451 457 aaPredicted RBP12.97□□□□□ -0.33
GABRB3-212ENST00000557641 ITPRIPQ8IWB1 547 aa12.97□□□□□ -0.33
GABRB3-212ENST00000557641 TMEM57Q8N5G2 664 aa12.97□□□□□ -0.33
GABRB3-212ENST00000557641 ASAP1Q9ULH1 1129 aa12.97□□□□□ -0.33
GABRB3-212ENST00000557641 TNNQ9UQP3 1299 aa12.97□□□□□ -0.33
GABRB3-212ENST00000557641 USP16Q9Y5T5 823 aa12.97□□□□□ -0.33
GABRB3-212ENST00000557641 PTCD1O75127 700 aaKnown RBP12.96□□□□□ -0.33
GABRB3-212ENST00000557641 STARD3NLO95772 234 aa12.96□□□□□ -0.33
GABRB3-212ENST00000557641 G2E3Q7L622 706 aa12.96□□□□□ -0.33
GABRB3-212ENST00000557641 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
GABRB3-212ENST00000557641 RGS12O14924 1447 aa12.96□□□□□ -0.34
GABRB3-212ENST00000557641 UBR2Q8IWV8 1755 aa12.95□□□□□ -0.34
GABRB3-212ENST00000557641 PRAMEF22A3QJZ6 481 aa12.95□□□□□ -0.34
GABRB3-212ENST00000557641 PDIA6Q15084 440 aa12.95□□□□□ -0.34
GABRB3-212ENST00000557641 ACSBG1Q96GR2 724 aa12.95□□□□□ -0.34
GABRB3-212ENST00000557641 PXDNLA1KZ92 1463 aa12.95□□□□□ -0.34
GABRB3-212ENST00000557641 CACNA1FO60840 1977 aa12.94□□□□□ -0.34
GABRB3-212ENST00000557641 KSR2Q6VAB6 950 aa12.94□□□□□ -0.34
GABRB3-212ENST00000557641 PHAXQ9H814 394 aaKnown RBP12.94□□□□□ -0.34
GABRB3-212ENST00000557641 ZBTB7BO15156 539 aaPredicted RBP12.93□□□□□ -0.34
GABRB3-212ENST00000557641 RXRBP28702 533 aa12.93□□□□□ -0.34
GABRB3-212ENST00000557641 FAM196AQ6ZSG2 479 aa12.93□□□□□ -0.34
GABRB3-212ENST00000557641 KRT27Q7Z3Y8 459 aa12.93□□□□□ -0.34
GABRB3-212ENST00000557641 DNAAF4Q8WXU2 420 aa12.93□□□□□ -0.34
GABRB3-212ENST00000557641 ZBTB40Q9NUA8 1239 aa12.93□□□□□ -0.34
GABRB3-212ENST00000557641 DOT1LQ8TEK3 1739 aa12.93□□□□□ -0.34
GABRB3-212ENST00000557641 IBTKQ9P2D0 1353 aaPredicted RBP12.93□□□□□ -0.34
GABRB3-212ENST00000557641 HMGB2P26583 209 aaKnown RBP12.92□□□□□ -0.34
GABRB3-212ENST00000557641 B4GALNT3Q6L9W6 998 aa12.92□□□□□ -0.34
GABRB3-212ENST00000557641 PELP1Q8IZL8 1130 aaKnown RBP12.92□□□□□ -0.34
GABRB3-212ENST00000557641 ITGB4P16144 1822 aa12.92□□□□□ -0.34
GABRB3-212ENST00000557641 PALLDQ8WX93 1383 aa12.92□□□□□ -0.34
GABRB3-212ENST00000557641 ATP10DQ9P241 1426 aa12.91□□□□□ -0.34
GABRB3-212ENST00000557641 PI4KAP2A4QPH2 592 aa12.91□□□□□ -0.34
GABRB3-212ENST00000557641 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
GABRB3-212ENST00000557641 KCNQ2O43526 872 aa12.91□□□□□ -0.34
GABRB3-212ENST00000557641 ALDH1L1O75891 902 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms