RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 PLEKHG2Q9H7P9 1386 aa9.8□□□□□ -0.84
SPTLC2-206ENST00000557566 CRISPLD2Q9H0B8 497 aa9.8□□□□□ -0.84
SPTLC2-206ENST00000557566 TNRC6CQ9HCJ0 1690 aaKnown RBP9.8□□□□□ -0.84
SPTLC2-206ENST00000557566 PKD1L3Q7Z443 1732 aa9.79□□□□□ -0.84
SPTLC2-206ENST00000557566 PDE4AP27815 886 aa9.79□□□□□ -0.84
SPTLC2-206ENST00000557566 MFSD10Q14728 455 aa9.79□□□□□ -0.84
SPTLC2-206ENST00000557566 FAM208AQ9UK61 1670 aaKnown RBP9.79□□□□□ -0.84
SPTLC2-206ENST00000557566 C10orf71Q711Q0 1435 aa9.79□□□□□ -0.84
SPTLC2-206ENST00000557566 KDM2BQ8NHM5 1336 aa9.79□□□□□ -0.84
SPTLC2-206ENST00000557566 KIF13BQ9NQT8 1826 aa9.78□□□□□ -0.84
SPTLC2-206ENST00000557566 SMC1BQ8NDV3 1235 aa9.78□□□□□ -0.84
SPTLC2-206ENST00000557566 KCNV2Q8TDN2 545 aa9.78□□□□□ -0.84
SPTLC2-206ENST00000557566 ANKRD24Q8TF21 1146 aa9.78□□□□□ -0.84
SPTLC2-206ENST00000557566 UBR3Q6ZT12 1888 aa9.78□□□□□ -0.84
SPTLC2-206ENST00000557566 CENPJQ9HC77 1338 aaPredicted RBP9.78□□□□□ -0.84
SPTLC2-206ENST00000557566 N4BP2Q86UW6 1770 aaPredicted RBP9.78□□□□□ -0.84
SPTLC2-206ENST00000557566 C4BP0C0L5 1744 aa9.77□□□□□ -0.85
SPTLC2-206ENST00000557566 NSD3Q9BZ95 1437 aa9.77□□□□□ -0.85
SPTLC2-206ENST00000557566 ARHGAP27Q6ZUM4 889 aa9.77□□□□□ -0.85
SPTLC2-206ENST00000557566 LARP6Q9BRS8 491 aaKnown RBP9.77□□□□□ -0.85
SPTLC2-206ENST00000557566 BCS1LQ9Y276 419 aa9.77□□□□□ -0.85
SPTLC2-206ENST00000557566 KCPQ6ZWJ8 1503 aa9.77□□□□□ -0.85
SPTLC2-206ENST00000557566 KIAA1551Q9HCM1 1747 aa9.76□□□□□ -0.85
SPTLC2-206ENST00000557566 TOGARAM1Q9Y4F4 1720 aa9.76□□□□□ -0.85
SPTLC2-206ENST00000557566 C2orf72A6NCS6 295 aa9.76□□□□□ -0.85
SPTLC2-206ENST00000557566 AK7Q96M32 723 aa9.76□□□□□ -0.85
SPTLC2-206ENST00000557566 PXDNLA1KZ92 1463 aa9.76□□□□□ -0.85
SPTLC2-206ENST00000557566 ARFGEF1Q9Y6D6 1849 aa9.75□□□□□ -0.85
SPTLC2-206ENST00000557566 BRCA1P38398 1863 aaKnown RBP9.75□□□□□ -0.85
SPTLC2-206ENST00000557566 E2F4Q16254 413 aa9.75□□□□□ -0.85
SPTLC2-206ENST00000557566 C9orf131Q5VYM1 1079 aa9.75□□□□□ -0.85
SPTLC2-206ENST00000557566 TMEM92Q6UXU6 159 aa9.75□□□□□ -0.85
SPTLC2-206ENST00000557566 ARHGEF1Q92888 912 aaKnown RBP9.75□□□□□ -0.85
SPTLC2-206ENST00000557566 MON2Q7Z3U7 1717 aa9.74□□□□□ -0.85
SPTLC2-206ENST00000557566 PHF14O94880 888 aa9.74□□□□□ -0.85
SPTLC2-206ENST00000557566 TGFB2P61812 414 aa9.74□□□□□ -0.85
SPTLC2-206ENST00000557566 FAM161AQ3B820 660 aa9.74□□□□□ -0.85
SPTLC2-206ENST00000557566 RRAGCQ9HB90 399 aa9.74□□□□□ -0.85
SPTLC2-206ENST00000557566 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.73□□□□□ -0.85
SPTLC2-206ENST00000557566 ZCRB1Q8TBF4 217 aaKnown RBP9.73□□□□□ -0.85
SPTLC2-206ENST00000557566 DDX27Q96GQ7 796 aaKnown RBP9.73□□□□□ -0.85
SPTLC2-206ENST00000557566 EVC2Q86UK5 1308 aa9.73□□□□□ -0.85
SPTLC2-206ENST00000557566 USP31Q70CQ4 1352 aa9.73□□□□□ -0.85
SPTLC2-206ENST00000557566 KTN1Q86UP2 1357 aaKnown RBP9.73□□□□□ -0.85
SPTLC2-206ENST00000557566 PALLDQ8WX93 1383 aa9.73□□□□□ -0.85
SPTLC2-206ENST00000557566 FCHSD2O94868 740 aa9.72□□□□□ -0.85
SPTLC2-206ENST00000557566 SSFA2P28290 1259 aa9.72□□□□□ -0.85
SPTLC2-206ENST00000557566 PRDM10Q9NQV6 1147 aa9.72□□□□□ -0.85
SPTLC2-206ENST00000557566 GPHNQ9NQX3 736 aaPredicted RBP9.72□□□□□ -0.85
SPTLC2-206ENST00000557566 ARIH1Q9Y4X5 557 aaPredicted RBP9.72□□□□□ -0.85
SPTLC2-206ENST00000557566 SBF1O95248 1867 aa9.71□□□□□ -0.85
SPTLC2-206ENST00000557566 A0A0G2JLW4 131 aa9.71□□□□□ -0.86
SPTLC2-206ENST00000557566 NBPF1Q3BBV0 1214 aa9.71□□□□□ -0.86
SPTLC2-206ENST00000557566 PPP1R15BQ5SWA1 713 aa9.71□□□□□ -0.86
SPTLC2-206ENST00000557566 AMIGO3Q86WK7 504 aa9.71□□□□□ -0.86
SPTLC2-206ENST00000557566 RGPD2P0DJD1 1756 aa9.7□□□□□ -0.86
SPTLC2-206ENST00000557566 MMP10P09238 476 aa9.7□□□□□ -0.86
SPTLC2-206ENST00000557566 CAMK2BQ13554 666 aa9.7□□□□□ -0.86
SPTLC2-206ENST00000557566 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.7□□□□□ -0.86
SPTLC2-206ENST00000557566 LTV1Q96GA3 475 aaPredicted RBP9.7□□□□□ -0.86
SPTLC2-206ENST00000557566 RNF181Q9P0P0 153 aa9.7□□□□□ -0.86
SPTLC2-206ENST00000557566 MEGF6O75095 1541 aa9.69□□□□□ -0.86
SPTLC2-206ENST00000557566 ITGB4P16144 1822 aa9.69□□□□□ -0.86
SPTLC2-206ENST00000557566 DSG2Q14126 1118 aa9.69□□□□□ -0.86
SPTLC2-206ENST00000557566 SMIM5Q71RC9 77 aa9.69□□□□□ -0.86
SPTLC2-206ENST00000557566 IP6K1Q92551 441 aa9.69□□□□□ -0.86
SPTLC2-206ENST00000557566 SMARCC1Q92922 1105 aaPredicted RBP9.69□□□□□ -0.86
SPTLC2-206ENST00000557566 ZC3H4Q9UPT8 1303 aaKnown RBP9.68□□□□□ -0.86
SPTLC2-206ENST00000557566 FOXN1O15353 648 aa9.68□□□□□ -0.86
SPTLC2-206ENST00000557566 DPEP1P16444 411 aa9.68□□□□□ -0.86
SPTLC2-206ENST00000557566 MLLT1Q03111 559 aaPredicted RBP9.68□□□□□ -0.86
SPTLC2-206ENST00000557566 TPRNQ4KMQ1 711 aa9.68□□□□□ -0.86
SPTLC2-206ENST00000557566 NME9Q86XW9 330 aa9.68□□□□□ -0.86
SPTLC2-206ENST00000557566 PLPP6Q8IY26 295 aa9.68□□□□□ -0.86
SPTLC2-206ENST00000557566 CCDC87Q9NVE4 849 aa9.68□□□□□ -0.86
SPTLC2-206ENST00000557566 CGNL1Q0VF96 1302 aa9.67□□□□□ -0.86
SPTLC2-206ENST00000557566 PRKCSHP14314 528 aaPredicted RBP9.67□□□□□ -0.86
SPTLC2-206ENST00000557566 VEGFAP15692 232 aaPredicted RBP9.67□□□□□ -0.86
SPTLC2-206ENST00000557566 CTCFP49711 727 aaPredicted RBP9.67□□□□□ -0.86
SPTLC2-206ENST00000557566 MPRIPQ6WCQ1 1025 aa9.67□□□□□ -0.86
SPTLC2-206ENST00000557566 AIDAQ96BJ3 306 aa9.67□□□□□ -0.86
SPTLC2-206ENST00000557566 C4AP0C0L4 1744 aa9.67□□□□□ -0.86
SPTLC2-206ENST00000557566 MAP2P11137 1827 aaKnown RBP9.66□□□□□ -0.86
SPTLC2-206ENST00000557566 GNPATO15228 680 aa9.66□□□□□ -0.86
SPTLC2-206ENST00000557566 FOXK1P85037 733 aa9.66□□□□□ -0.86
SPTLC2-206ENST00000557566 ZNF710Q8N1W2 664 aa9.66□□□□□ -0.86
SPTLC2-206ENST00000557566 NLGN1Q8N2Q7 840 aa9.66□□□□□ -0.86
SPTLC2-206ENST00000557566 ABHD8Q96I13 439 aa9.66□□□□□ -0.86
SPTLC2-206ENST00000557566 DCAF5Q96JK2 942 aa9.66□□□□□ -0.86
SPTLC2-206ENST00000557566 PIM2Q9P1W9 311 aa9.66□□□□□ -0.86
SPTLC2-206ENST00000557566 SBNO2Q9Y2G9 1366 aa9.65□□□□□ -0.86
SPTLC2-206ENST00000557566 PCDH11XQ9BZA7 1347 aa9.65□□□□□ -0.86
SPTLC2-206ENST00000557566 PCDH11YQ9BZA8 1340 aa9.65□□□□□ -0.86
SPTLC2-206ENST00000557566 DALRD3Q5D0E6 543 aaKnown RBP9.65□□□□□ -0.86
SPTLC2-206ENST00000557566 LINC00116Q8NCU8 138 aa9.65□□□□□ -0.86
SPTLC2-206ENST00000557566 MKRN1Q9UHC7 482 aaKnown RBP9.65□□□□□ -0.86
SPTLC2-206ENST00000557566 GLTPD2A6NH11 291 aa9.64□□□□□ -0.87
SPTLC2-206ENST00000557566 TMF1P82094 1093 aa9.64□□□□□ -0.87
SPTLC2-206ENST00000557566 RAPGEF4Q8WZA2 1011 aa9.64□□□□□ -0.87
SPTLC2-206ENST00000557566 RNF166Q96A37 237 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms