RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 GPC6Q9Y625 555 aaPredicted RBP7.36□□□□□ -1.23
CHD8-212ENST00000557329 CSB-PGBD3P0DP91 1061 aa7.35□□□□□ -1.23
CHD8-212ENST00000557329 CLDN10P78369 228 aa7.35□□□□□ -1.23
CHD8-212ENST00000557329 POU4F2Q12837 409 aa7.35□□□□□ -1.23
CHD8-212ENST00000557329 ELOAQ14241 798 aaKnown RBP7.35□□□□□ -1.23
CHD8-212ENST00000557329 PGBD3Q8N328 593 aa7.35□□□□□ -1.23
CHD8-212ENST00000557329 ZDHHC3Q9NYG2 299 aa7.35□□□□□ -1.23
CHD8-212ENST00000557329 SCHIP1Q9P0W5 487 aaPredicted RBP7.35□□□□□ -1.23
CHD8-212ENST00000557329 USP17L15C9J2P7 530 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 USP17L10C9JJH3 530 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 USP17L13C9JLJ4 530 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 USP17L12C9JPN9 530 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 USP17L11C9JVI0 530 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 USP17L21D6R901 530 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 USP17L18D6R9N7 530 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 USP17L22D6RA61 530 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 USP17L17D6RBQ6 530 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 USP17L19D6RCP7 530 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 USP17L20D6RJB6 530 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 ADAMTS2O95450 1211 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 TATP17735 454 aaPredicted RBP7.34□□□□□ -1.23
CHD8-212ENST00000557329 SRSF11Q05519 484 aaKnown RBP7.34□□□□□ -1.23
CHD8-212ENST00000557329 USP17L24Q0WX57 530 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 PTK7Q13308 1070 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 ANKMY2Q8IV38 441 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 TRIM22Q8IYM9 498 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 PBXIP1Q96AQ6 731 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 SERTAD1Q9UHV2 236 aa7.34□□□□□ -1.23
CHD8-212ENST00000557329 PSMA6P60900 246 aaKnown RBP7.33□□□□□ -1.24
CHD8-212ENST00000557329 TEAD4Q15561 434 aa7.33□□□□□ -1.24
CHD8-212ENST00000557329 STAG2Q8N3U4 1231 aa7.33□□□□□ -1.24
CHD8-212ENST00000557329 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.33□□□□□ -1.24
CHD8-212ENST00000557329 FAM200AQ8TCP9 573 aa7.33□□□□□ -1.24
CHD8-212ENST00000557329 TRERF1Q96PN7 1200 aa7.33□□□□□ -1.24
CHD8-212ENST00000557329 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.33□□□□□ -1.24
CHD8-212ENST00000557329 SENP3-EIF4A1A0A087X0R7 540 aa7.32□□□□□ -1.24
CHD8-212ENST00000557329 MAP3K10Q02779 954 aa7.32□□□□□ -1.24
CHD8-212ENST00000557329 HIF1AQ16665 826 aa7.32□□□□□ -1.24
CHD8-212ENST00000557329 C4orf17Q53FE4 359 aa7.32□□□□□ -1.24
CHD8-212ENST00000557329 EFHC2Q5JST6 749 aa7.32□□□□□ -1.24
CHD8-212ENST00000557329 FIGNL1Q6PIW4 674 aa7.32□□□□□ -1.24
CHD8-212ENST00000557329 LYPD4Q6UWN0 246 aa7.32□□□□□ -1.24
CHD8-212ENST00000557329 ZNF594Q96JF6 807 aaPredicted RBP7.32□□□□□ -1.24
CHD8-212ENST00000557329 CABP1Q9NZU7 370 aa7.32□□□□□ -1.24
CHD8-212ENST00000557329 PHF24Q9UPV7 400 aa7.32□□□□□ -1.24
CHD8-212ENST00000557329 EIF4G1Q04637 1599 aaKnown RBP7.32□□□□□ -1.24
CHD8-212ENST00000557329 ACIN1Q9UKV3 1341 aaKnown RBP7.31□□□□□ -1.24
CHD8-212ENST00000557329 ATG7O95352 703 aa7.31□□□□□ -1.24
CHD8-212ENST00000557329 RHOQP17081 205 aa7.31□□□□□ -1.24
CHD8-212ENST00000557329 SWI5Q1ZZU3 235 aa7.31□□□□□ -1.24
CHD8-212ENST00000557329 GAS2L1Q99501 681 aaPredicted RBP7.31□□□□□ -1.24
CHD8-212ENST00000557329 CRISPLD1Q9H336 500 aa7.31□□□□□ -1.24
CHD8-212ENST00000557329 IQSEC3Q9UPP2 1182 aaPredicted RBP7.31□□□□□ -1.24
CHD8-212ENST00000557329 SERTM1A2A2V5 107 aa7.3□□□□□ -1.24
CHD8-212ENST00000557329 CELA2BP08218 269 aaPredicted RBP7.3□□□□□ -1.24
CHD8-212ENST00000557329 HIRAP54198 1017 aaPredicted RBP7.3□□□□□ -1.24
CHD8-212ENST00000557329 EPHA4P54764 986 aa7.3□□□□□ -1.24
CHD8-212ENST00000557329 C1orf53Q5VUE5 145 aa7.3□□□□□ -1.24
CHD8-212ENST00000557329 RIPOR1Q6ZS17 1223 aa7.3□□□□□ -1.24
CHD8-212ENST00000557329 NLRP8Q86W28 1048 aa7.3□□□□□ -1.24
CHD8-212ENST00000557329 NSFL1CQ9UNZ2 370 aaKnown RBP7.3□□□□□ -1.24
CHD8-212ENST00000557329 ERCC6Q03468 1493 aa7.3□□□□□ -1.24
CHD8-212ENST00000557329 PLA2G4AP47712 749 aa7.29□□□□□ -1.24
CHD8-212ENST00000557329 PDE4CQ08493 712 aa7.29□□□□□ -1.24
CHD8-212ENST00000557329 DPYDQ12882 1025 aa7.29□□□□□ -1.24
CHD8-212ENST00000557329 GAS6Q14393 721 aa7.29□□□□□ -1.24
CHD8-212ENST00000557329 CRTC2Q53ET0 693 aaPredicted RBP7.29□□□□□ -1.24
CHD8-212ENST00000557329 HINFPQ9BQA5 517 aa7.29□□□□□ -1.24
CHD8-212ENST00000557329 CFHR5Q9BXR6 569 aa7.29□□□□□ -1.24
CHD8-212ENST00000557329 NUCKS1Q9H1E3 243 aaKnown RBP7.29□□□□□ -1.24
CHD8-212ENST00000557329 ENAMQ9NRM1 1142 aa7.29□□□□□ -1.24
CHD8-212ENST00000557329 KIAA1024Q9UPX6 916 aa7.29□□□□□ -1.24
CHD8-212ENST00000557329 DKK1O94907 266 aa7.28□□□□□ -1.24
CHD8-212ENST00000557329 IGFBP4P22692 258 aa7.28□□□□□ -1.24
CHD8-212ENST00000557329 NOS2P35228 1153 aa7.28□□□□□ -1.24
CHD8-212ENST00000557329 SLC9A9Q8IVB4 645 aa7.28□□□□□ -1.24
CHD8-212ENST00000557329 AIDAQ96BJ3 306 aa7.28□□□□□ -1.24
CHD8-212ENST00000557329 NEUROD4Q9HD90 331 aa7.28□□□□□ -1.24
CHD8-212ENST00000557329 ANKIB1Q9P2G1 1089 aa7.28□□□□□ -1.24
CHD8-212ENST00000557329 NOVA2Q9UNW9 492 aaKnown RBP7.28□□□□□ -1.24
CHD8-212ENST00000557329 PHF20L1A8MW92 1017 aa7.27□□□□□ -1.25
CHD8-212ENST00000557329 FOXO3O43524 673 aa7.27□□□□□ -1.25
CHD8-212ENST00000557329 MSX1P28360 303 aa7.27□□□□□ -1.25
CHD8-212ENST00000557329 PHKA2P46019 1235 aa7.27□□□□□ -1.25
CHD8-212ENST00000557329 POTEAQ6S8J7 498 aa7.27□□□□□ -1.25
CHD8-212ENST00000557329 TNS4Q8IZW8 715 aa7.27□□□□□ -1.25
CHD8-212ENST00000557329 CCDC82Q8N4S0 544 aa7.27□□□□□ -1.25
CHD8-212ENST00000557329 L3MBTL2Q969R5 705 aa7.27□□□□□ -1.25
CHD8-212ENST00000557329 ZNF232Q9UNY5 417 aa7.27□□□□□ -1.25
CHD8-212ENST00000557329 ATAD2Q6PL18 1390 aa7.27□□□□□ -1.25
CHD8-212ENST00000557329 ARID3CA6NKF2 412 aa7.26□□□□□ -1.25
CHD8-212ENST00000557329 SFI1A8K8P3 1242 aa7.26□□□□□ -1.25
CHD8-212ENST00000557329 STAU1O95793 577 aaKnown RBP7.26□□□□□ -1.25
CHD8-212ENST00000557329 SRPK2P78362 688 aaKnown RBP7.26□□□□□ -1.25
CHD8-212ENST00000557329 TSEN2Q8NCE0 465 aaKnown RBP7.26□□□□□ -1.25
CHD8-212ENST00000557329 ZNF837Q96EG3 531 aaPredicted RBP7.26□□□□□ -1.25
CHD8-212ENST00000557329 ARXQ96QS3 562 aa7.26□□□□□ -1.25
CHD8-212ENST00000557329 MBIPQ9NS73 344 aa7.26□□□□□ -1.25
CHD8-212ENST00000557329 CUEDC1Q9NWM3 386 aaPredicted RBP7.26□□□□□ -1.25
CHD8-212ENST00000557329 GJA3Q9Y6H8 435 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms