RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 WHAMMQ8TF30 809 aa8.51□□□□□ -1.05
ATXN3-246ENST00000557030 ARHGEF15O94989 841 aa8.5□□□□□ -1.05
ATXN3-246ENST00000557030 RASA1P20936 1047 aa8.5□□□□□ -1.05
ATXN3-246ENST00000557030 FOXR1Q6PIV2 292 aa8.5□□□□□ -1.05
ATXN3-246ENST00000557030 SLC9A9Q8IVB4 645 aa8.5□□□□□ -1.05
ATXN3-246ENST00000557030 HCN2Q9UL51 889 aa8.5□□□□□ -1.05
ATXN3-246ENST00000557030 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
ATXN3-246ENST00000557030 FAM196BA6NMK8 535 aa8.49□□□□□ -1.05
ATXN3-246ENST00000557030 SFI1A8K8P3 1242 aa8.49□□□□□ -1.05
ATXN3-246ENST00000557030 EML1O00423 815 aa8.49□□□□□ -1.05
ATXN3-246ENST00000557030 LMOD1P29536 600 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-246ENST00000557030 NOS2P35228 1153 aa8.49□□□□□ -1.05
ATXN3-246ENST00000557030 NLRP8Q86W28 1048 aa8.49□□□□□ -1.05
ATXN3-246ENST00000557030 ZNF594Q96JF6 807 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-246ENST00000557030 C21orf2O43822 256 aa8.48□□□□□ -1.05
ATXN3-246ENST00000557030 CSB-PGBD3P0DP91 1061 aa8.48□□□□□ -1.05
ATXN3-246ENST00000557030 TXLNAP40222 546 aa8.48□□□□□ -1.05
ATXN3-246ENST00000557030 HIRAP54198 1017 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-246ENST00000557030 SRPK2P78362 688 aaKnown RBP8.48□□□□□ -1.05
ATXN3-246ENST00000557030 EFHC2Q5JST6 749 aa8.48□□□□□ -1.05
ATXN3-246ENST00000557030 PGBD3Q8N328 593 aa8.48□□□□□ -1.05
ATXN3-246ENST00000557030 TSEN2Q8NCE0 465 aaKnown RBP8.48□□□□□ -1.05
ATXN3-246ENST00000557030 L3MBTL2Q969R5 705 aa8.48□□□□□ -1.05
ATXN3-246ENST00000557030 TRERF1Q96PN7 1200 aa8.48□□□□□ -1.05
ATXN3-246ENST00000557030 ARXQ96QS3 562 aa8.48□□□□□ -1.05
ATXN3-246ENST00000557030 ZIC5Q96T25 663 aa8.48□□□□□ -1.05
ATXN3-246ENST00000557030 TSPAN10Q9H1Z9 355 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-246ENST00000557030 CABP1Q9NZU7 370 aa8.48□□□□□ -1.05
ATXN3-246ENST00000557030 IGF1RP08069 1367 aa8.48□□□□□ -1.05
ATXN3-246ENST00000557030 BNIP3LO60238 219 aa8.47□□□□□ -1.05
ATXN3-246ENST00000557030 SEC13P55735 322 aa8.47□□□□□ -1.05
ATXN3-246ENST00000557030 NBPF1Q3BBV0 1214 aa8.47□□□□□ -1.05
ATXN3-246ENST00000557030 TBCELQ5QJ74 424 aa8.47□□□□□ -1.05
ATXN3-246ENST00000557030 LYPD4Q6UWN0 246 aa8.47□□□□□ -1.05
ATXN3-246ENST00000557030 C14orf37Q86TY3 774 aa8.47□□□□□ -1.05
ATXN3-246ENST00000557030 VRTNQ9H8Y1 702 aa8.47□□□□□ -1.05
ATXN3-246ENST00000557030 ATXN7L1Q9ULK2 861 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-246ENST00000557030 PARP3Q9Y6F1 533 aa8.47□□□□□ -1.05
ATXN3-246ENST00000557030 USP17L15C9J2P7 530 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 USP17L10C9JJH3 530 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 USP17L13C9JLJ4 530 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 USP17L12C9JPN9 530 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 USP17L11C9JVI0 530 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 USP17L21D6R901 530 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 USP17L18D6R9N7 530 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 USP17L22D6RA61 530 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 USP17L17D6RBQ6 530 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 USP17L19D6RCP7 530 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 USP17L20D6RJB6 530 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 MX2P20592 715 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 USP17L24Q0WX57 530 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 SH3PXD2AQ5TCZ1 1133 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 STAG2Q8N3U4 1231 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 AIDAQ96BJ3 306 aa8.46□□□□□ -1.06
ATXN3-246ENST00000557030 ZCCHC2Q9C0B9 1178 aaKnown RBP8.46□□□□□ -1.06
ATXN3-246ENST00000557030 A0A1W2PNR3 127 aa8.45□□□□□ -1.06
ATXN3-246ENST00000557030 CELA2BP08218 269 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-246ENST00000557030 PSMA6P60900 246 aaKnown RBP8.45□□□□□ -1.06
ATXN3-246ENST00000557030 DPYDQ12882 1025 aa8.45□□□□□ -1.06
ATXN3-246ENST00000557030 SAMD5Q5TGI4 173 aa8.45□□□□□ -1.06
ATXN3-246ENST00000557030 KLRG1Q96E93 195 aa8.45□□□□□ -1.06
ATXN3-246ENST00000557030 C2CD2LO14523 706 aa8.44□□□□□ -1.06
ATXN3-246ENST00000557030 FIGNL1Q6PIW4 674 aa8.44□□□□□ -1.06
ATXN3-246ENST00000557030 LARP1Q6PKG0 1096 aaKnown RBP8.44□□□□□ -1.06
ATXN3-246ENST00000557030 ANKMY2Q8IV38 441 aa8.44□□□□□ -1.06
ATXN3-246ENST00000557030 ACDQ96AP0 544 aa8.44□□□□□ -1.06
ATXN3-246ENST00000557030 ABHD17AQ96GS6 310 aa8.44□□□□□ -1.06
ATXN3-246ENST00000557030 LRRC4BQ9NT99 713 aa8.44□□□□□ -1.06
ATXN3-246ENST00000557030 ADAMTS8Q9UP79 889 aa8.44□□□□□ -1.06
ATXN3-246ENST00000557030 PHF24Q9UPV7 400 aa8.44□□□□□ -1.06
ATXN3-246ENST00000557030 PCDHGC4Q9Y5F7 938 aa8.44□□□□□ -1.06
ATXN3-246ENST00000557030 GPC6Q9Y625 555 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-246ENST00000557030 SERTM1A2A2V5 107 aa8.43□□□□□ -1.06
ATXN3-246ENST00000557030 TATP17735 454 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-246ENST00000557030 SVOPQ8N4V2 548 aa8.43□□□□□ -1.06
ATXN3-246ENST00000557030 GAS2L2Q8NHY3 880 aa8.43□□□□□ -1.06
ATXN3-246ENST00000557030 C2orf49Q9BVC5 232 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-246ENST00000557030 EFSO43281 561 aa8.42□□□□□ -1.06
ATXN3-246ENST00000557030 MAP2K3P46734 347 aa8.42□□□□□ -1.06
ATXN3-246ENST00000557030 GSK3AP49840 483 aa8.42□□□□□ -1.06
ATXN3-246ENST00000557030 TNP2Q05952 138 aa8.42□□□□□ -1.06
ATXN3-246ENST00000557030 C1orf53Q5VUE5 145 aa8.42□□□□□ -1.06
ATXN3-246ENST00000557030 ATAD2Q6PL18 1390 aa8.42□□□□□ -1.06
ATXN3-246ENST00000557030 ATXN7O15265 892 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-246ENST00000557030 FAM157BP0CG42 384 aa8.41□□□□□ -1.06
ATXN3-246ENST00000557030 FGFR3P22607 806 aa8.41□□□□□ -1.06
ATXN3-246ENST00000557030 CTBSQ01459 385 aa8.41□□□□□ -1.06
ATXN3-246ENST00000557030 ARSJQ5FYB0 599 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-246ENST00000557030 FAM182BQ5T319 152 aa8.41□□□□□ -1.06
ATXN3-246ENST00000557030 MAPTP10636 758 aaKnown RBP8.4□□□□□ -1.06
ATXN3-246ENST00000557030 BCRP11274 1271 aa8.4□□□□□ -1.06
ATXN3-246ENST00000557030 C1orf229Q6ZS94 237 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-246ENST00000557030 NSFL1CQ9UNZ2 370 aaKnown RBP8.4□□□□□ -1.06
ATXN3-246ENST00000557030 RBM19Q9Y4C8 960 aaKnown RBP8.4□□□□□ -1.06
ATXN3-246ENST00000557030 IGFBP4P22692 258 aa8.39□□□□□ -1.07
ATXN3-246ENST00000557030 KCNMA1Q12791 1236 aa8.39□□□□□ -1.07
ATXN3-246ENST00000557030 ELOAQ14241 798 aaKnown RBP8.39□□□□□ -1.07
ATXN3-246ENST00000557030 ZNF232Q9UNY5 417 aa8.39□□□□□ -1.07
ATXN3-246ENST00000557030 OIP5O43482 229 aa8.38□□□□□ -1.07
ATXN3-246ENST00000557030 PPP1R12BO60237 982 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms