RNA–Protein interactions for RNA: ENST00000556959.1

SIPA1L1-215, Transcript of signal induced proliferation associated 1 like 1, humanhuman

TSL 3

Gene SIPA1L1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L1-215ENST00000556959 ZNF831Q5JPB2 1677 aa11.08□□□□□ -0.64
SIPA1L1-215ENST00000556959 TOMM70O94826 608 aa11.07□□□□□ -0.64
SIPA1L1-215ENST00000556959 SLC39A6Q13433 755 aa11.07□□□□□ -0.64
SIPA1L1-215ENST00000556959 DNAJC10Q8IXB1 793 aa11.07□□□□□ -0.64
SIPA1L1-215ENST00000556959 NLGN1Q8N2Q7 840 aa11.07□□□□□ -0.64
SIPA1L1-215ENST00000556959 SLC52A2Q9HAB3 445 aa11.07□□□□□ -0.64
SIPA1L1-215ENST00000556959 PARP3Q9Y6F1 533 aa11.07□□□□□ -0.64
SIPA1L1-215ENST00000556959 CACNA1SQ13698 1873 aa11.06□□□□□ -0.64
SIPA1L1-215ENST00000556959 APLP1P51693 650 aa11.06□□□□□ -0.64
SIPA1L1-215ENST00000556959 RC3H1Q5TC82 1133 aaKnown RBP11.06□□□□□ -0.64
SIPA1L1-215ENST00000556959 CCDC24Q8N4L8 307 aa11.06□□□□□ -0.64
SIPA1L1-215ENST00000556959 IL17REQ8NFR9 667 aa11.06□□□□□ -0.64
SIPA1L1-215ENST00000556959 CCDC87Q9NVE4 849 aa11.06□□□□□ -0.64
SIPA1L1-215ENST00000556959 RNF181Q9P0P0 153 aa11.06□□□□□ -0.64
SIPA1L1-215ENST00000556959 HMGB2P26583 209 aaKnown RBP11.05□□□□□ -0.64
SIPA1L1-215ENST00000556959 USPL1Q5W0Q7 1092 aa11.05□□□□□ -0.64
SIPA1L1-215ENST00000556959 RSPH6AQ9H0K4 717 aa11.05□□□□□ -0.64
SIPA1L1-215ENST00000556959 USP42Q9H9J4 1324 aaKnown RBP11.05□□□□□ -0.64
SIPA1L1-215ENST00000556959 CARMIL3Q8ND23 1372 aa11.04□□□□□ -0.64
SIPA1L1-215ENST00000556959 ANKRD31Q8N7Z5 1873 aa11.04□□□□□ -0.64
SIPA1L1-215ENST00000556959 POLRMTO00411 1230 aaKnown RBP11.04□□□□□ -0.64
SIPA1L1-215ENST00000556959 TM4SF1P30408 202 aa11.04□□□□□ -0.64
SIPA1L1-215ENST00000556959 PRKAR2BP31323 418 aa11.04□□□□□ -0.64
SIPA1L1-215ENST00000556959 BCL2L12Q9HB09 334 aa11.04□□□□□ -0.64
SIPA1L1-215ENST00000556959 PIM2Q9P1W9 311 aa11.04□□□□□ -0.64
SIPA1L1-215ENST00000556959 DALRD3Q5D0E6 543 aaKnown RBP11.03□□□□□ -0.64
SIPA1L1-215ENST00000556959 ZNF219Q9P2Y4 722 aaPredicted RBP11.03□□□□□ -0.64
SIPA1L1-215ENST00000556959 ADRA2BP18089 450 aa11.02□□□□□ -0.65
SIPA1L1-215ENST00000556959 NFIXQ14938 502 aa11.02□□□□□ -0.65
SIPA1L1-215ENST00000556959 KLRG1Q96E93 195 aa11.02□□□□□ -0.65
SIPA1L1-215ENST00000556959 CFAP53Q96M91 514 aa11.02□□□□□ -0.65
SIPA1L1-215ENST00000556959 DLEC1Q9Y238 1755 aa11.02□□□□□ -0.65
SIPA1L1-215ENST00000556959 CEMIPQ8WUJ3 1361 aa11.02□□□□□ -0.65
SIPA1L1-215ENST00000556959 TIAM2Q8IVF5 1701 aa11.01□□□□□ -0.65
SIPA1L1-215ENST00000556959 GNAT3A8MTJ3 354 aa11.01□□□□□ -0.65
SIPA1L1-215ENST00000556959 U2AF1L5P0DN76 240 aaPredicted RBP11.01□□□□□ -0.65
SIPA1L1-215ENST00000556959 CYP19A1P11511 503 aaPredicted RBP11.01□□□□□ -0.65
SIPA1L1-215ENST00000556959 U2AF1Q01081 240 aaKnown RBP eCLIP11.01□□□□□ -0.65
SIPA1L1-215ENST00000556959 BICDL1Q6ZP65 573 aa11.01□□□□□ -0.65
SIPA1L1-215ENST00000556959 GAS2L2Q8NHY3 880 aa11.01□□□□□ -0.65
SIPA1L1-215ENST00000556959 RBM46Q8TBY0 533 aaKnown RBP11.01□□□□□ -0.65
SIPA1L1-215ENST00000556959 ZBTB1Q9Y2K1 713 aa11.01□□□□□ -0.65
SIPA1L1-215ENST00000556959 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
SIPA1L1-215ENST00000556959 COL11A2P13942 1736 aaPredicted RBP11.01□□□□□ -0.65
SIPA1L1-215ENST00000556959 NRXN2Q9P2S2 1712 aa11.01□□□□□ -0.65
SIPA1L1-215ENST00000556959 POTECB2RU33 542 aa11□□□□□ -0.65
SIPA1L1-215ENST00000556959 KCNQ3O43525 872 aa11□□□□□ -0.65
SIPA1L1-215ENST00000556959 ZNF496Q96IT1 587 aaPredicted RBP11□□□□□ -0.65
SIPA1L1-215ENST00000556959 SOS1Q07889 1333 aaPredicted RBP11□□□□□ -0.65
SIPA1L1-215ENST00000556959 SLX4Q8IY92 1834 aa11□□□□□ -0.65
SIPA1L1-215ENST00000556959 UBR2Q8IWV8 1755 aa10.99□□□□□ -0.65
SIPA1L1-215ENST00000556959 CANXP27824 592 aaKnown RBP10.99□□□□□ -0.65
SIPA1L1-215ENST00000556959 C16orf71Q8IYS4 520 aaPredicted RBP10.99□□□□□ -0.65
SIPA1L1-215ENST00000556959 DICER1Q9UPY3 1922 aaKnown RBP10.99□□□□□ -0.65
SIPA1L1-215ENST00000556959 NFKBIEO00221 500 aa10.98□□□□□ -0.65
SIPA1L1-215ENST00000556959 POTEIP0CG38 1075 aa10.98□□□□□ -0.65
SIPA1L1-215ENST00000556959 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
SIPA1L1-215ENST00000556959 PIP4K2AP48426 406 aaPredicted RBP10.98□□□□□ -0.65
SIPA1L1-215ENST00000556959 DCTN1Q14203 1278 aa10.98□□□□□ -0.65
SIPA1L1-215ENST00000556959 ZNF790Q6PG37 636 aa10.98□□□□□ -0.65
SIPA1L1-215ENST00000556959 MCM10Q7L590 875 aa10.98□□□□□ -0.65
SIPA1L1-215ENST00000556959 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
SIPA1L1-215ENST00000556959 NUDCQ9Y266 331 aa10.98□□□□□ -0.65
SIPA1L1-215ENST00000556959 SIPA1L3O60292 1781 aaPredicted RBP10.98□□□□□ -0.65
SIPA1L1-215ENST00000556959 FER1L6Q2WGJ9 1857 aa10.98□□□□□ -0.65
SIPA1L1-215ENST00000556959 ZPR1O75312 459 aa10.97□□□□□ -0.65
SIPA1L1-215ENST00000556959 SERPINB2P05120 415 aa10.97□□□□□ -0.65
SIPA1L1-215ENST00000556959 TEFQ10587 303 aa10.97□□□□□ -0.65
SIPA1L1-215ENST00000556959 C2CD5Q86YS7 1000 aa10.97□□□□□ -0.65
SIPA1L1-215ENST00000556959 JMYQ8N9B5 988 aa10.97□□□□□ -0.65
SIPA1L1-215ENST00000556959 HEG1Q9ULI3 1381 aa10.97□□□□□ -0.65
SIPA1L1-215ENST00000556959 COL15A1P39059 1388 aa10.96□□□□□ -0.65
SIPA1L1-215ENST00000556959 DDX10Q13206 875 aaKnown RBP10.96□□□□□ -0.65
SIPA1L1-215ENST00000556959 TBC1D9BQ66K14 1250 aa10.96□□□□□ -0.65
SIPA1L1-215ENST00000556959 PLEKHF1Q96S99 279 aa10.96□□□□□ -0.65
SIPA1L1-215ENST00000556959 NARFQ9UHQ1 456 aa10.96□□□□□ -0.65
SIPA1L1-215ENST00000556959 KDM2BQ8NHM5 1336 aa10.95□□□□□ -0.66
SIPA1L1-215ENST00000556959 PRAMEF22A3QJZ6 481 aa10.95□□□□□ -0.66
SIPA1L1-215ENST00000556959 EIF5P55010 431 aaKnown RBP10.95□□□□□ -0.66
SIPA1L1-215ENST00000556959 SLC51AQ86UW1 340 aa10.95□□□□□ -0.66
SIPA1L1-215ENST00000556959 TTC5Q8N0Z6 440 aa10.95□□□□□ -0.66
SIPA1L1-215ENST00000556959 TBC1D2BQ9UPU7 963 aa10.95□□□□□ -0.66
SIPA1L1-215ENST00000556959 ZNF330Q9Y3S2 320 aaPredicted RBP10.95□□□□□ -0.66
SIPA1L1-215ENST00000556959 BTBD11A6QL63 1104 aa10.94□□□□□ -0.66
SIPA1L1-215ENST00000556959 C21orf2O43822 256 aa10.94□□□□□ -0.66
SIPA1L1-215ENST00000556959 HSPA1AP0DMV8 641 aaKnown RBP10.94□□□□□ -0.66
SIPA1L1-215ENST00000556959 HSPA1BP0DMV9 641 aaKnown RBP10.94□□□□□ -0.66
SIPA1L1-215ENST00000556959 FSTL1Q12841 308 aa10.94□□□□□ -0.66
SIPA1L1-215ENST00000556959 OLFM4Q6UX06 510 aa10.94□□□□□ -0.66
SIPA1L1-215ENST00000556959 TNS4Q8IZW8 715 aa10.94□□□□□ -0.66
SIPA1L1-215ENST00000556959 ZNF622Q969S3 477 aaKnown RBP eCLIP10.94□□□□□ -0.66
SIPA1L1-215ENST00000556959 GLTPD2A6NH11 291 aa10.93□□□□□ -0.66
SIPA1L1-215ENST00000556959 A1BGP04217 495 aa10.93□□□□□ -0.66
SIPA1L1-215ENST00000556959 LMNB1P20700 586 aa10.93□□□□□ -0.66
SIPA1L1-215ENST00000556959 TTLL6Q8N841 843 aa10.93□□□□□ -0.66
SIPA1L1-215ENST00000556959 SMC1BQ8NDV3 1235 aa10.93□□□□□ -0.66
SIPA1L1-215ENST00000556959 FMNL2Q96PY5 1086 aa10.93□□□□□ -0.66
SIPA1L1-215ENST00000556959 THUMPD2Q9BTF0 503 aaKnown RBP10.93□□□□□ -0.66
SIPA1L1-215ENST00000556959 MIS18AQ9NYP9 233 aa10.93□□□□□ -0.66
SIPA1L1-215ENST00000556959 USP16Q9Y5T5 823 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms