RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 ATXN7L1Q9ULK2 861 aaPredicted RBP10.06□□□□□ -0.8
HIF1A-209ENST00000556827 BCRP11274 1271 aa10.05□□□□□ -0.8
HIF1A-209ENST00000556827 FIGNL1Q6PIW4 674 aa10.05□□□□□ -0.8
HIF1A-209ENST00000556827 ERICH6Q7L0X2 663 aa10.05□□□□□ -0.8
HIF1A-209ENST00000556827 ACDQ96AP0 544 aa10.05□□□□□ -0.8
HIF1A-209ENST00000556827 UBAP2LQ14157 1087 aaKnown RBP10.04□□□□□ -0.8
HIF1A-209ENST00000556827 ZNF295-AS1Q8N0V1 137 aa10.04□□□□□ -0.8
HIF1A-209ENST00000556827 NEDD1Q8NHV4 660 aa10.04□□□□□ -0.8
HIF1A-209ENST00000556827 SCHIP1Q9P0W5 487 aaPredicted RBP10.04□□□□□ -0.8
HIF1A-209ENST00000556827 PARP3Q9Y6F1 533 aa10.04□□□□□ -0.8
HIF1A-209ENST00000556827 ARID3CA6NKF2 412 aa10.03□□□□□ -0.8
HIF1A-209ENST00000556827 SUPT5HO00267 1087 aaKnown RBP10.03□□□□□ -0.8
HIF1A-209ENST00000556827 FGFR3P22607 806 aa10.03□□□□□ -0.8
HIF1A-209ENST00000556827 CCDC102BQ68D86 513 aa10.03□□□□□ -0.8
HIF1A-209ENST00000556827 SCARF2Q96GP6 870 aaPredicted RBP10.03□□□□□ -0.8
HIF1A-209ENST00000556827 OXCT2Q9BYC2 517 aaPredicted RBP10.03□□□□□ -0.8
HIF1A-209ENST00000556827 DNAAF2Q9NVR5 837 aaKnown RBP10.03□□□□□ -0.8
HIF1A-209ENST00000556827 ZDHHC3Q9NYG2 299 aa10.03□□□□□ -0.8
HIF1A-209ENST00000556827 MKRN1Q9UHC7 482 aaKnown RBP10.03□□□□□ -0.8
HIF1A-209ENST00000556827 KIAA1024Q9UPX6 916 aa10.03□□□□□ -0.8
HIF1A-209ENST00000556827 GJA3Q9Y6H8 435 aa10.03□□□□□ -0.8
HIF1A-209ENST00000556827 A0A1W2PNR3 127 aa10.02□□□□□ -0.81
HIF1A-209ENST00000556827 BNIP3LO60238 219 aa10.02□□□□□ -0.81
HIF1A-209ENST00000556827 BMP4P12644 408 aa10.02□□□□□ -0.81
HIF1A-209ENST00000556827 IRS1P35568 1242 aa10.02□□□□□ -0.81
HIF1A-209ENST00000556827 CLDN10P78369 228 aa10.02□□□□□ -0.81
HIF1A-209ENST00000556827 BICDL1Q6ZP65 573 aa10.02□□□□□ -0.81
HIF1A-209ENST00000556827 NLRP8Q86W28 1048 aa10.02□□□□□ -0.81
HIF1A-209ENST00000556827 SLC9A9Q8IVB4 645 aa10.02□□□□□ -0.81
HIF1A-209ENST00000556827 TNS4Q8IZW8 715 aa10.02□□□□□ -0.81
HIF1A-209ENST00000556827 OGFOD1Q8N543 542 aa10.02□□□□□ -0.81
HIF1A-209ENST00000556827 RBM19Q9Y4C8 960 aaKnown RBP10.02□□□□□ -0.81
HIF1A-209ENST00000556827 RASSF7Q02833 373 aa10.01□□□□□ -0.81
HIF1A-209ENST00000556827 TBCELQ5QJ74 424 aa10.01□□□□□ -0.81
HIF1A-209ENST00000556827 TMEM151AQ8N4L1 468 aa10.01□□□□□ -0.81
HIF1A-209ENST00000556827 ZNF594Q96JF6 807 aaPredicted RBP10.01□□□□□ -0.81
HIF1A-209ENST00000556827 CALR3Q96L12 384 aaKnown RBP10.01□□□□□ -0.81
HIF1A-209ENST00000556827 ZCCHC2Q9C0B9 1178 aaKnown RBP10.01□□□□□ -0.81
HIF1A-209ENST00000556827 ZNF232Q9UNY5 417 aa10.01□□□□□ -0.81
HIF1A-209ENST00000556827 PCDHGC4Q9Y5F7 938 aa10.01□□□□□ -0.81
HIF1A-209ENST00000556827 PALM3A6NDB9 673 aaPredicted RBP10□□□□□ -0.81
HIF1A-209ENST00000556827 ATXN7O15265 892 aaPredicted RBP10□□□□□ -0.81
HIF1A-209ENST00000556827 GDF11O95390 407 aa10□□□□□ -0.81
HIF1A-209ENST00000556827 KLRG1Q96E93 195 aa10□□□□□ -0.81
HIF1A-209ENST00000556827 NDFIP2Q9NV92 336 aa10□□□□□ -0.81
HIF1A-209ENST00000556827 DCDC2BA2VCK2 349 aa9.99□□□□□ -0.81
HIF1A-209ENST00000556827 OIP5O43482 229 aa9.99□□□□□ -0.81
HIF1A-209ENST00000556827 EPHA4P54764 986 aa9.99□□□□□ -0.81
HIF1A-209ENST00000556827 FOXK2Q01167 660 aa9.99□□□□□ -0.81
HIF1A-209ENST00000556827 PODNQ7Z5L7 613 aa9.99□□□□□ -0.81
HIF1A-209ENST00000556827 LARGE2Q8N3Y3 721 aa9.99□□□□□ -0.81
HIF1A-209ENST00000556827 L3MBTL2Q969R5 705 aa9.99□□□□□ -0.81
HIF1A-209ENST00000556827 TFIP11Q9UBB9 837 aaKnown RBP9.99□□□□□ -0.81
HIF1A-209ENST00000556827 GDF2Q9UK05 429 aaPredicted RBP9.99□□□□□ -0.81
HIF1A-209ENST00000556827 ZBTB7BO15156 539 aaPredicted RBP9.98□□□□□ -0.81
HIF1A-209ENST00000556827 GSK3AP49840 483 aa9.98□□□□□ -0.81
HIF1A-209ENST00000556827 ZDHHC1Q8WTX9 485 aa9.98□□□□□ -0.81
HIF1A-209ENST00000556827 LRRC4BQ9NT99 713 aa9.98□□□□□ -0.81
HIF1A-209ENST00000556827 MAFBQ9Y5Q3 323 aaPredicted RBP9.98□□□□□ -0.81
HIF1A-209ENST00000556827 RASA1P20936 1047 aa9.97□□□□□ -0.81
HIF1A-209ENST00000556827 TXLNAP40222 546 aa9.97□□□□□ -0.81
HIF1A-209ENST00000556827 CTBSQ01459 385 aa9.97□□□□□ -0.81
HIF1A-209ENST00000556827 TEAD4Q15561 434 aa9.97□□□□□ -0.81
HIF1A-209ENST00000556827 GOLGA6L1Q8N7Z2 621 aa9.97□□□□□ -0.81
HIF1A-209ENST00000556827 ZIC5Q96T25 663 aa9.97□□□□□ -0.81
HIF1A-209ENST00000556827 SERTM1A2A2V5 107 aa9.96□□□□□ -0.82
HIF1A-209ENST00000556827 KHNYNO15037 678 aaKnown RBP9.96□□□□□ -0.82
HIF1A-209ENST00000556827 NOS2P35228 1153 aa9.96□□□□□ -0.82
HIF1A-209ENST00000556827 KANK3Q6NY19 840 aa9.96□□□□□ -0.82
HIF1A-209ENST00000556827 SIX5Q8N196 739 aa9.96□□□□□ -0.82
HIF1A-209ENST00000556827 C1orf115Q9H7X2 142 aa9.96□□□□□ -0.82
HIF1A-209ENST00000556827 CHMP3Q9Y3E7 222 aa9.96□□□□□ -0.82
HIF1A-209ENST00000556827 PHF20L1A8MW92 1017 aa9.95□□□□□ -0.82
HIF1A-209ENST00000556827 C2CD2LO14523 706 aa9.95□□□□□ -0.82
HIF1A-209ENST00000556827 MAPTP10636 758 aaKnown RBP9.95□□□□□ -0.82
HIF1A-209ENST00000556827 KCTD17Q8N5Z5 321 aa9.95□□□□□ -0.82
HIF1A-209ENST00000556827 GALNT6Q8NCL4 622 aa9.95□□□□□ -0.82
HIF1A-209ENST00000556827 TSPAN10Q9H1Z9 355 aaPredicted RBP9.95□□□□□ -0.82
HIF1A-209ENST00000556827 NEUROD4Q9HD90 331 aa9.95□□□□□ -0.82
HIF1A-209ENST00000556827 SFI1A8K8P3 1242 aa9.94□□□□□ -0.82
HIF1A-209ENST00000556827 CD33P20138 364 aa9.94□□□□□ -0.82
HIF1A-209ENST00000556827 PSMA6P60900 246 aaKnown RBP9.94□□□□□ -0.82
HIF1A-209ENST00000556827 BEND7Q8N7W2 519 aaPredicted RBP9.94□□□□□ -0.82
HIF1A-209ENST00000556827 TSEN2Q8NCE0 465 aaKnown RBP9.94□□□□□ -0.82
HIF1A-209ENST00000556827 PPP1R12CQ9BZL4 782 aa9.94□□□□□ -0.82
HIF1A-209ENST00000556827 GGA1Q9UJY5 639 aa9.94□□□□□ -0.82
HIF1A-209ENST00000556827 CNTNAP5Q8WYK1 1306 aa9.93□□□□□ -0.82
HIF1A-209ENST00000556827 M0R2N6 131 aa9.93□□□□□ -0.82
HIF1A-209ENST00000556827 FAM157BP0CG42 384 aa9.93□□□□□ -0.82
HIF1A-209ENST00000556827 TNP2Q05952 138 aa9.93□□□□□ -0.82
HIF1A-209ENST00000556827 LARP1Q6PKG0 1096 aaKnown RBP9.93□□□□□ -0.82
HIF1A-209ENST00000556827 SLCO4C1Q6ZQN7 724 aa9.93□□□□□ -0.82
HIF1A-209ENST00000556827 SHISA8B8ZZ34 492 aa9.92□□□□□ -0.82
HIF1A-209ENST00000556827 AMPD1P23109 780 aa9.92□□□□□ -0.82
HIF1A-209ENST00000556827 SH3PXD2AQ5TCZ1 1133 aa9.92□□□□□ -0.82
HIF1A-209ENST00000556827 SAMD5Q5TGI4 173 aa9.92□□□□□ -0.82
HIF1A-209ENST00000556827 LRRC69Q6ZNQ3 347 aa9.92□□□□□ -0.82
HIF1A-209ENST00000556827 RHPN1Q8TCX5 695 aa9.92□□□□□ -0.82
HIF1A-209ENST00000556827 EDARADDQ8WWZ3 215 aa9.92□□□□□ -0.82
HIF1A-209ENST00000556827 RRAGCQ9HB90 399 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms