RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 COL13A1Q5TAT6 717 aaPredicted RBP21.33■■□□□ 1.01
TGFB3-206ENST00000556674 KCPQ6ZWJ8 1503 aa21.33■■□□□ 1
TGFB3-206ENST00000556674 N4BP2Q86UW6 1770 aaPredicted RBP21.33■■□□□ 1
TGFB3-206ENST00000556674 TJP1Q07157 1748 aa21.32■■□□□ 1
TGFB3-206ENST00000556674 KIF13BQ9NQT8 1826 aa21.32■■□□□ 1
TGFB3-206ENST00000556674 HTRA3P83110 453 aa21.32■■□□□ 1
TGFB3-206ENST00000556674 SLC39A6Q13433 755 aa21.32■■□□□ 1
TGFB3-206ENST00000556674 ZNF790Q6PG37 636 aa21.32■■□□□ 1
TGFB3-206ENST00000556674 A0A0G2JLW4 131 aa21.31■■□□□ 1
TGFB3-206ENST00000556674 RPS6KA4O75676 772 aa21.31■■□□□ 1
TGFB3-206ENST00000556674 BTBD11A6QL63 1104 aa21.3■■□□□ 1
TGFB3-206ENST00000556674 TGFB2P61812 414 aa21.3■■□□□ 1
TGFB3-206ENST00000556674 TRAPPC3LQ5T215 181 aa21.3■■□□□ 1
TGFB3-206ENST00000556674 ARHGAP27Q6ZUM4 889 aa21.3■■□□□ 1
TGFB3-206ENST00000556674 KLRG1Q96E93 195 aa21.3■■□□□ 1
TGFB3-206ENST00000556674 TEX13AQ9BXU3 409 aaPredicted RBP21.3■■□□□ 1
TGFB3-206ENST00000556674 CAPN15O75808 1086 aa21.29■■□□□ 1
TGFB3-206ENST00000556674 CRKLP46109 303 aaKnown RBP21.29■■□□□ 1
TGFB3-206ENST00000556674 LMOD3Q0VAK6 560 aa21.29■■□□□ 1
TGFB3-206ENST00000556674 MCM10Q7L590 875 aa21.29■■□□□ 1
TGFB3-206ENST00000556674 RBM46Q8TBY0 533 aaKnown RBP21.29■■□□□ 1
TGFB3-206ENST00000556674 FMNL2Q96PY5 1086 aa21.29■■□□□ 1
TGFB3-206ENST00000556674 DLG5Q8TDM6 1919 aa21.28■■□□□ 1
TGFB3-206ENST00000556674 ANP32CO43423 234 aa21.28■■□□□ 1
TGFB3-206ENST00000556674 JMYQ8N9B5 988 aa21.28■■□□□ 1
TGFB3-206ENST00000556674 PNISRQ8TF01 805 aaKnown RBP21.28■■□□□ 1
TGFB3-206ENST00000556674 HEG1Q9ULI3 1381 aa21.27■■□□□ 1
TGFB3-206ENST00000556674 STARD3NLO95772 234 aa21.27■■□□□ 1
TGFB3-206ENST00000556674 DNAJC10Q8IXB1 793 aa21.27■■□□□ 1
TGFB3-206ENST00000556674 RUNDC1Q96C34 613 aa21.27■■□□□ 1
TGFB3-206ENST00000556674 CCDC87Q9NVE4 849 aa21.27■■□□□ 1
TGFB3-206ENST00000556674 C10orf71Q711Q0 1435 aa21.27■■□□□ 1
TGFB3-206ENST00000556674 TAF7Q15545 349 aaPredicted RBP21.26■□□□□ 0.99
TGFB3-206ENST00000556674 CYP19A1P11511 503 aaPredicted RBP21.25■□□□□ 0.99
TGFB3-206ENST00000556674 DPEP1P16444 411 aa21.25■□□□□ 0.99
TGFB3-206ENST00000556674 RFC4P35249 363 aa21.25■□□□□ 0.99
TGFB3-206ENST00000556674 C16orf71Q8IYS4 520 aaPredicted RBP21.25■□□□□ 0.99
TGFB3-206ENST00000556674 ZNF496Q96IT1 587 aaPredicted RBP21.25■□□□□ 0.99
TGFB3-206ENST00000556674 DCTN1Q14203 1278 aa21.24■□□□□ 0.99
TGFB3-206ENST00000556674 C9orf131Q5VYM1 1079 aa21.24■□□□□ 0.99
TGFB3-206ENST00000556674 MYH14Q7Z406 1995 aaKnown RBP21.24■□□□□ 0.99
TGFB3-206ENST00000556674 TMPOP42166 694 aaKnown RBP21.23■□□□□ 0.99
TGFB3-206ENST00000556674 RIPK4P57078 832 aa21.23■□□□□ 0.99
TGFB3-206ENST00000556674 INTS5Q6P9B9 1019 aaKnown RBP21.23■□□□□ 0.99
TGFB3-206ENST00000556674 NLGN1Q8N2Q7 840 aa21.23■□□□□ 0.99
TGFB3-206ENST00000556674 ARHGEF1Q92888 912 aaKnown RBP21.23■□□□□ 0.99
TGFB3-206ENST00000556674 ADAMTS8Q9UP79 889 aa21.23■□□□□ 0.99
TGFB3-206ENST00000556674 BRCA1P38398 1863 aaKnown RBP21.22■□□□□ 0.99
TGFB3-206ENST00000556674 FSTL1Q12841 308 aa21.22■□□□□ 0.99
TGFB3-206ENST00000556674 C4AP0C0L4 1744 aa21.21■□□□□ 0.99
TGFB3-206ENST00000556674 TNS4Q8IZW8 715 aa21.21■□□□□ 0.99
TGFB3-206ENST00000556674 BABAM1Q9NWV8 329 aa21.2■□□□□ 0.98
TGFB3-206ENST00000556674 SOS1Q07889 1333 aaPredicted RBP21.2■□□□□ 0.98
TGFB3-206ENST00000556674 SNRPA1P09661 255 aaKnown RBP21.19■□□□□ 0.98
TGFB3-206ENST00000556674 KCNA3P22001 575 aa21.19■□□□□ 0.98
TGFB3-206ENST00000556674 A0A087WZG4 1122 aa21.18■□□□□ 0.98
TGFB3-206ENST00000556674 GYS1P13807 737 aa21.18■□□□□ 0.98
TGFB3-206ENST00000556674 PRELPP51888 382 aa21.18■□□□□ 0.98
TGFB3-206ENST00000556674 CCDC146Q8IYE0 955 aa21.18■□□□□ 0.98
TGFB3-206ENST00000556674 ZBTB1Q9Y2K1 713 aa21.18■□□□□ 0.98
TGFB3-206ENST00000556674 KDM2BQ8NHM5 1336 aa21.18■□□□□ 0.98
TGFB3-206ENST00000556674 USP42Q9H9J4 1324 aaKnown RBP21.18■□□□□ 0.98
TGFB3-206ENST00000556674 COL15A1P39059 1388 aa21.18■□□□□ 0.98
TGFB3-206ENST00000556674 KDM3BQ7LBC6 1761 aa21.18■□□□□ 0.98
TGFB3-206ENST00000556674 ARFGEF1Q9Y6D6 1849 aa21.18■□□□□ 0.98
TGFB3-206ENST00000556674 ZPR1O75312 459 aa21.17■□□□□ 0.98
TGFB3-206ENST00000556674 NPM2Q86SE8 214 aaKnown RBP21.17■□□□□ 0.98
TGFB3-206ENST00000556674 RRAGCQ9HB90 399 aa21.17■□□□□ 0.98
TGFB3-206ENST00000556674 PARP3Q9Y6F1 533 aa21.17■□□□□ 0.98
TGFB3-206ENST00000556674 KCNQ3O43525 872 aa21.16■□□□□ 0.98
TGFB3-206ENST00000556674 IL6STP40189 918 aaPredicted RBP21.15■□□□□ 0.98
TGFB3-206ENST00000556674 RNF181Q9P0P0 153 aa21.15■□□□□ 0.98
TGFB3-206ENST00000556674 PIM2Q9P1W9 311 aa21.15■□□□□ 0.98
TGFB3-206ENST00000556674 CANXP27824 592 aaKnown RBP21.14■□□□□ 0.97
TGFB3-206ENST00000556674 EIF5P55010 431 aaKnown RBP21.14■□□□□ 0.97
TGFB3-206ENST00000556674 NARFQ9UHQ1 456 aa21.14■□□□□ 0.97
TGFB3-206ENST00000556674 TNRC6CQ9HCJ0 1690 aaKnown RBP21.13■□□□□ 0.97
TGFB3-206ENST00000556674 NEUROD2Q15784 382 aa21.13■□□□□ 0.97
TGFB3-206ENST00000556674 THUMPD2Q9BTF0 503 aaKnown RBP21.13■□□□□ 0.97
TGFB3-206ENST00000556674 MRS2Q9HD23 443 aa21.13■□□□□ 0.97
TGFB3-206ENST00000556674 DALRD3Q5D0E6 543 aaKnown RBP21.12■□□□□ 0.97
TGFB3-206ENST00000556674 SMC1BQ8NDV3 1235 aa21.12■□□□□ 0.97
TGFB3-206ENST00000556674 TSPYL4Q9UJ04 414 aa21.12■□□□□ 0.97
TGFB3-206ENST00000556674 RRP7AQ9Y3A4 280 aaKnown RBP21.12■□□□□ 0.97
TGFB3-206ENST00000556674 LAMB4A4D0S4 1761 aa21.12■□□□□ 0.97
TGFB3-206ENST00000556674 EIF4A1P60842 406 aaKnown RBP21.11■□□□□ 0.97
TGFB3-206ENST00000556674 CALD1Q05682 793 aaKnown RBP21.11■□□□□ 0.97
TGFB3-206ENST00000556674 MIS18AQ9NYP9 233 aa21.11■□□□□ 0.97
TGFB3-206ENST00000556674 USP16Q9Y5T5 823 aa21.11■□□□□ 0.97
TGFB3-206ENST00000556674 USPL1Q5W0Q7 1092 aa21.1■□□□□ 0.97
TGFB3-206ENST00000556674 SRP68Q9UHB9 627 aaKnown RBP21.1■□□□□ 0.97
TGFB3-206ENST00000556674 TRIM35Q9UPQ4 493 aa21.1■□□□□ 0.97
TGFB3-206ENST00000556674 PCNTO95613 3336 aa21.09■□□□□ 0.97
TGFB3-206ENST00000556674 A1BGP04217 495 aa21.09■□□□□ 0.97
TGFB3-206ENST00000556674 APAF1O14727 1248 aa21.08■□□□□ 0.97
TGFB3-206ENST00000556674 HSPA1AP0DMV8 641 aaKnown RBP21.08■□□□□ 0.97
TGFB3-206ENST00000556674 HSPA1BP0DMV9 641 aaKnown RBP21.08■□□□□ 0.97
TGFB3-206ENST00000556674 CHRNA5P30532 468 aa21.08■□□□□ 0.97
TGFB3-206ENST00000556674 FKBP8Q14318 412 aa21.08■□□□□ 0.97
TGFB3-206ENST00000556674 SBF1O95248 1867 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms