RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 POM121CA8CG34 1229 aa8.09□□□□□ -1.11
ATXN3-243ENST00000556671 GDF11O95390 407 aa8.09□□□□□ -1.11
ATXN3-243ENST00000556671 MAP2K3P46734 347 aa8.09□□□□□ -1.11
ATXN3-243ENST00000556671 NCOA4Q13772 614 aa8.09□□□□□ -1.11
ATXN3-243ENST00000556671 C1orf216Q8TAB5 229 aa8.09□□□□□ -1.11
ATXN3-243ENST00000556671 ADAMTS19Q8TE59 1207 aa8.09□□□□□ -1.11
ATXN3-243ENST00000556671 SCARF2Q96GP6 870 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-243ENST00000556671 LRRC4BQ9NT99 713 aa8.09□□□□□ -1.11
ATXN3-243ENST00000556671 USP17L5A8MUK1 530 aa8.08□□□□□ -1.12
ATXN3-243ENST00000556671 CDK2AP1O14519 115 aa8.08□□□□□ -1.12
ATXN3-243ENST00000556671 ATP4AP20648 1035 aa8.08□□□□□ -1.12
ATXN3-243ENST00000556671 GTF2IP78347 998 aa8.08□□□□□ -1.12
ATXN3-243ENST00000556671 NDFIP2Q9NV92 336 aa8.08□□□□□ -1.12
ATXN3-243ENST00000556671 ATXN7L1Q9ULK2 861 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-243ENST00000556671 USP3Q9Y6I4 520 aa8.08□□□□□ -1.12
ATXN3-243ENST00000556671 THOC2Q8NI27 1593 aaKnown RBP8.08□□□□□ -1.12
ATXN3-243ENST00000556671 IRS1P35568 1242 aa8.07□□□□□ -1.12
ATXN3-243ENST00000556671 TMEM132AQ24JP5 1023 aa8.07□□□□□ -1.12
ATXN3-243ENST00000556671 OXCT2Q9BYC2 517 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-243ENST00000556671 DNAAF2Q9NVR5 837 aaKnown RBP8.07□□□□□ -1.12
ATXN3-243ENST00000556671 CUX2O14529 1486 aa8.06□□□□□ -1.12
ATXN3-243ENST00000556671 MRC2Q9UBG0 1479 aa8.06□□□□□ -1.12
ATXN3-243ENST00000556671 BACH1O14867 736 aa8.06□□□□□ -1.12
ATXN3-243ENST00000556671 OIP5O43482 229 aa8.06□□□□□ -1.12
ATXN3-243ENST00000556671 BNIP3LO60238 219 aa8.06□□□□□ -1.12
ATXN3-243ENST00000556671 KANK3Q6NY19 840 aa8.06□□□□□ -1.12
ATXN3-243ENST00000556671 DEPDC4Q8N2C3 294 aa8.06□□□□□ -1.12
ATXN3-243ENST00000556671 KCTD17Q8N5Z5 321 aa8.06□□□□□ -1.12
ATXN3-243ENST00000556671 KLRG1Q96E93 195 aa8.06□□□□□ -1.12
ATXN3-243ENST00000556671 FIGNL1Q6PIW4 674 aa8.05□□□□□ -1.12
ATXN3-243ENST00000556671 NLRP8Q86W28 1048 aa8.05□□□□□ -1.12
ATXN3-243ENST00000556671 PLEKHM2Q8IWE5 1019 aa8.05□□□□□ -1.12
ATXN3-243ENST00000556671 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.05□□□□□ -1.12
ATXN3-243ENST00000556671 AIDAQ96BJ3 306 aa8.05□□□□□ -1.12
ATXN3-243ENST00000556671 ABHD17AQ96GS6 310 aa8.05□□□□□ -1.12
ATXN3-243ENST00000556671 UCN2Q96RP3 112 aa8.05□□□□□ -1.12
ATXN3-243ENST00000556671 ZNF358Q9NW07 568 aa8.05□□□□□ -1.12
ATXN3-243ENST00000556671 ZDHHC3Q9NYG2 299 aa8.05□□□□□ -1.12
ATXN3-243ENST00000556671 NBPF1Q3BBV0 1214 aa8.04□□□□□ -1.12
ATXN3-243ENST00000556671 HDGFL1Q5TGJ6 251 aa8.04□□□□□ -1.12
ATXN3-243ENST00000556671 NEDD1Q8NHV4 660 aa8.04□□□□□ -1.12
ATXN3-243ENST00000556671 CABP1Q9NZU7 370 aa8.04□□□□□ -1.12
ATXN3-243ENST00000556671 SCHIP1Q9P0W5 487 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-243ENST00000556671 FGFR3P22607 806 aa8.03□□□□□ -1.12
ATXN3-243ENST00000556671 PSME1Q06323 249 aa8.03□□□□□ -1.12
ATXN3-243ENST00000556671 TRIM50Q86XT4 487 aa8.03□□□□□ -1.12
ATXN3-243ENST00000556671 ZCCHC2Q9C0B9 1178 aaKnown RBP8.03□□□□□ -1.12
ATXN3-243ENST00000556671 GDF2Q9UK05 429 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-243ENST00000556671 PCDHGC4Q9Y5F7 938 aa8.03□□□□□ -1.12
ATXN3-243ENST00000556671 CNTNAP5Q8WYK1 1306 aa8.03□□□□□ -1.12
ATXN3-243ENST00000556671 A0A1W2PNR3 127 aa8.02□□□□□ -1.13
ATXN3-243ENST00000556671 USP17L3A6NCW0 530 aa8.02□□□□□ -1.13
ATXN3-243ENST00000556671 USP17L4A6NCW7 530 aa8.02□□□□□ -1.13
ATXN3-243ENST00000556671 C2CD2LO14523 706 aa8.02□□□□□ -1.13
ATXN3-243ENST00000556671 ATP9BO43861 1147 aa8.02□□□□□ -1.13
ATXN3-243ENST00000556671 BMP4P12644 408 aa8.02□□□□□ -1.13
ATXN3-243ENST00000556671 TATP17735 454 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-243ENST00000556671 EPHA4P54764 986 aa8.02□□□□□ -1.13
ATXN3-243ENST00000556671 FOXK2Q01167 660 aa8.02□□□□□ -1.13
ATXN3-243ENST00000556671 CTBSQ01459 385 aa8.02□□□□□ -1.13
ATXN3-243ENST00000556671 USP17L2Q6R6M4 530 aa8.02□□□□□ -1.13
ATXN3-243ENST00000556671 C1orf229Q6ZS94 237 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-243ENST00000556671 USP17L1Q7RTZ2 530 aa8.02□□□□□ -1.13
ATXN3-243ENST00000556671 FNBP4Q8N3X1 1017 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-243ENST00000556671 DNMT3AQ9Y6K1 912 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-243ENST00000556671 PHF20L1A8MW92 1017 aa8.01□□□□□ -1.13
ATXN3-243ENST00000556671 ZBTB7BO15156 539 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-243ENST00000556671 ATXN7O15265 892 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-243ENST00000556671 BEND7Q8N7W2 519 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-243ENST00000556671 GOLGA6L1Q8N7Z2 621 aa8.01□□□□□ -1.13
ATXN3-243ENST00000556671 ZDHHC1Q8WTX9 485 aa8.01□□□□□ -1.13
ATXN3-243ENST00000556671 CLUAP1Q96AJ1 413 aa8.01□□□□□ -1.13
ATXN3-243ENST00000556671 ZIC5Q96T25 663 aa8.01□□□□□ -1.13
ATXN3-243ENST00000556671 KIAA1024Q9UPX6 916 aa8.01□□□□□ -1.13
ATXN3-243ENST00000556671 URB2Q14146 1524 aaKnown RBP8.01□□□□□ -1.13
ATXN3-243ENST00000556671 WDR62O43379 1518 aa8□□□□□ -1.13
ATXN3-243ENST00000556671 SHISA8B8ZZ34 492 aa8□□□□□ -1.13
ATXN3-243ENST00000556671 ATP1A2P50993 1020 aa8□□□□□ -1.13
ATXN3-243ENST00000556671 TEAD4Q15561 434 aa8□□□□□ -1.13
ATXN3-243ENST00000556671 ARSJQ5FYB0 599 aaPredicted RBP8□□□□□ -1.13
ATXN3-243ENST00000556671 PODNQ7Z5L7 613 aa8□□□□□ -1.13
ATXN3-243ENST00000556671 PROSER2Q86WR7 435 aaPredicted RBP8□□□□□ -1.13
ATXN3-243ENST00000556671 GALNT6Q8NCL4 622 aa8□□□□□ -1.13
ATXN3-243ENST00000556671 HCN2Q9UL51 889 aa8□□□□□ -1.13
ATXN3-243ENST00000556671 TXLNAP40222 546 aa7.99□□□□□ -1.13
ATXN3-243ENST00000556671 CLDN10P78369 228 aa7.99□□□□□ -1.13
ATXN3-243ENST00000556671 TNP2Q05952 138 aa7.99□□□□□ -1.13
ATXN3-243ENST00000556671 SLC9A9Q8IVB4 645 aa7.99□□□□□ -1.13
ATXN3-243ENST00000556671 TNS4Q8IZW8 715 aa7.99□□□□□ -1.13
ATXN3-243ENST00000556671 TPCN2Q8NHX9 752 aa7.99□□□□□ -1.13
ATXN3-243ENST00000556671 EDARADDQ8WWZ3 215 aa7.99□□□□□ -1.13
ATXN3-243ENST00000556671 PARP3Q9Y6F1 533 aa7.99□□□□□ -1.13
ATXN3-243ENST00000556671 MAPTP10636 758 aaKnown RBP7.98□□□□□ -1.13
ATXN3-243ENST00000556671 NOS2P35228 1153 aa7.98□□□□□ -1.13
ATXN3-243ENST00000556671 FAM182BQ5T319 152 aa7.98□□□□□ -1.13
ATXN3-243ENST00000556671 CCDC102BQ68D86 513 aa7.98□□□□□ -1.13
ATXN3-243ENST00000556671 SLCO4C1Q6ZQN7 724 aa7.98□□□□□ -1.13
ATXN3-243ENST00000556671 L3MBTL2Q969R5 705 aa7.98□□□□□ -1.13
ATXN3-243ENST00000556671 GGA1Q9UJY5 639 aa7.98□□□□□ -1.13
ATXN3-243ENST00000556671 DCDC2BA2VCK2 349 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms