RNA–Protein interactions for RNA: ENST00000556657.1

AL139099.3-201, humanhuman

TSL 3 BASIC

Gene AL139099.3, Length 401 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139099.3-201ENST00000556657 CICQ96RK0 1608 aaPredicted RBP17.11■□□□□ 0.33
AL139099.3-201ENST00000556657 PNISRQ8TF01 805 aaKnown RBP17.11■□□□□ 0.33
AL139099.3-201ENST00000556657 MAPK8IP3Q9UPT6 1336 aa17.11■□□□□ 0.33
AL139099.3-201ENST00000556657 HEG1Q9ULI3 1381 aa17.11■□□□□ 0.33
AL139099.3-201ENST00000556657 COL5A3P25940 1745 aaPredicted RBP17.1■□□□□ 0.33
AL139099.3-201ENST00000556657 ZPR1O75312 459 aa17.1■□□□□ 0.33
AL139099.3-201ENST00000556657 MMP10P09238 476 aa17.1■□□□□ 0.33
AL139099.3-201ENST00000556657 GPR162Q16538 588 aa17.1■□□□□ 0.33
AL139099.3-201ENST00000556657 SOS1Q07889 1333 aaPredicted RBP17.1■□□□□ 0.33
AL139099.3-201ENST00000556657 KCPQ6ZWJ8 1503 aa17.1■□□□□ 0.33
AL139099.3-201ENST00000556657 A0A087WZG4 1122 aa17.09■□□□□ 0.33
AL139099.3-201ENST00000556657 USP42Q9H9J4 1324 aaKnown RBP17.09■□□□□ 0.33
AL139099.3-201ENST00000556657 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.32
AL139099.3-201ENST00000556657 GRIN3BO60391 1043 aa17.08■□□□□ 0.32
AL139099.3-201ENST00000556657 ABCB7O75027 752 aa17.08■□□□□ 0.32
AL139099.3-201ENST00000556657 SNRPA1P09661 255 aaKnown RBP17.08■□□□□ 0.32
AL139099.3-201ENST00000556657 DCTN1Q14203 1278 aa17.08■□□□□ 0.32
AL139099.3-201ENST00000556657 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
AL139099.3-201ENST00000556657 NLGN2Q8NFZ4 835 aa17.08■□□□□ 0.32
AL139099.3-201ENST00000556657 NARFQ9UHQ1 456 aa17.08■□□□□ 0.32
AL139099.3-201ENST00000556657 PARP3Q9Y6F1 533 aa17.08■□□□□ 0.32
AL139099.3-201ENST00000556657 EIF5P55010 431 aaKnown RBP17.07■□□□□ 0.32
AL139099.3-201ENST00000556657 TGFB2P61812 414 aa17.07■□□□□ 0.32
AL139099.3-201ENST00000556657 ZNF219Q9P2Y4 722 aaPredicted RBP17.07■□□□□ 0.32
AL139099.3-201ENST00000556657 ZBTB1Q9Y2K1 713 aa17.07■□□□□ 0.32
AL139099.3-201ENST00000556657 MYH14Q7Z406 1995 aaKnown RBP17.07■□□□□ 0.32
AL139099.3-201ENST00000556657 KCNQ3O43525 872 aa17.06■□□□□ 0.32
AL139099.3-201ENST00000556657 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
AL139099.3-201ENST00000556657 TM4SF1P30408 202 aa17.06■□□□□ 0.32
AL139099.3-201ENST00000556657 IL6STP40189 918 aaPredicted RBP17.06■□□□□ 0.32
AL139099.3-201ENST00000556657 WDR43Q15061 677 aaKnown RBP eCLIP17.06■□□□□ 0.32
AL139099.3-201ENST00000556657 TJP1Q07157 1748 aa17.06■□□□□ 0.32
AL139099.3-201ENST00000556657 VIRMAQ69YN4 1812 aaKnown RBP17.05■□□□□ 0.32
AL139099.3-201ENST00000556657 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
AL139099.3-201ENST00000556657 RIPK4P57078 832 aa17.05■□□□□ 0.32
AL139099.3-201ENST00000556657 LMOD3Q0VAK6 560 aa17.05■□□□□ 0.32
AL139099.3-201ENST00000556657 NPM2Q86SE8 214 aaKnown RBP17.05■□□□□ 0.32
AL139099.3-201ENST00000556657 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
AL139099.3-201ENST00000556657 BABAM1Q9NWV8 329 aa17.05■□□□□ 0.32
AL139099.3-201ENST00000556657 SRP68Q9UHB9 627 aaKnown RBP17.05■□□□□ 0.32
AL139099.3-201ENST00000556657 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
AL139099.3-201ENST00000556657 FKBP8Q14318 412 aa17.04■□□□□ 0.32
AL139099.3-201ENST00000556657 USPL1Q5W0Q7 1092 aa17.04■□□□□ 0.32
AL139099.3-201ENST00000556657 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
AL139099.3-201ENST00000556657 UBR2Q8IWV8 1755 aa17.04■□□□□ 0.32
AL139099.3-201ENST00000556657 COL15A1P39059 1388 aa17.03■□□□□ 0.32
AL139099.3-201ENST00000556657 SIPA1L3O60292 1781 aaPredicted RBP17.03■□□□□ 0.32
AL139099.3-201ENST00000556657 ADAMTS8Q9UP79 889 aa17.03■□□□□ 0.32
AL139099.3-201ENST00000556657 A1BGP04217 495 aa17.02■□□□□ 0.32
AL139099.3-201ENST00000556657 PELP1Q8IZL8 1130 aaKnown RBP17.01■□□□□ 0.31
AL139099.3-201ENST00000556657 MIS18AQ9NYP9 233 aa17.01■□□□□ 0.31
AL139099.3-201ENST00000556657 POLRMTO00411 1230 aaKnown RBP16.99■□□□□ 0.31
AL139099.3-201ENST00000556657 RGL2O15211 777 aa16.99■□□□□ 0.31
AL139099.3-201ENST00000556657 GIGYF1O75420 1035 aaPredicted RBP16.99■□□□□ 0.31
AL139099.3-201ENST00000556657 YBX3P16989 372 aaKnown RBP eCLIP16.99■□□□□ 0.31
AL139099.3-201ENST00000556657 EIF4A1P60842 406 aaKnown RBP16.99■□□□□ 0.31
AL139099.3-201ENST00000556657 NFIXQ14938 502 aa16.99■□□□□ 0.31
AL139099.3-201ENST00000556657 BCL2L12Q9HB09 334 aa16.99■□□□□ 0.31
AL139099.3-201ENST00000556657 DDR1Q08345 913 aa16.98■□□□□ 0.31
AL139099.3-201ENST00000556657 CLEC4GQ6UXB4 293 aa16.98■□□□□ 0.31
AL139099.3-201ENST00000556657 THUMPD2Q9BTF0 503 aaKnown RBP16.98■□□□□ 0.31
AL139099.3-201ENST00000556657 CCDC146Q8IYE0 955 aa16.97■□□□□ 0.31
AL139099.3-201ENST00000556657 TBC1D2BQ9UPU7 963 aa16.97■□□□□ 0.31
AL139099.3-201ENST00000556657 A0A0G2JLW4 131 aa16.96■□□□□ 0.31
AL139099.3-201ENST00000556657 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
AL139099.3-201ENST00000556657 SERPINB2P05120 415 aa16.96■□□□□ 0.31
AL139099.3-201ENST00000556657 TSPYL4Q9UJ04 414 aa16.96■□□□□ 0.31
AL139099.3-201ENST00000556657 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
AL139099.3-201ENST00000556657 C4AP0C0L4 1744 aa16.96■□□□□ 0.3
AL139099.3-201ENST00000556657 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.3
AL139099.3-201ENST00000556657 ANP32CO43423 234 aa16.95■□□□□ 0.3
AL139099.3-201ENST00000556657 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
AL139099.3-201ENST00000556657 DZIP3Q86Y13 1208 aaKnown RBP16.95■□□□□ 0.3
AL139099.3-201ENST00000556657 NBPF26B4DH59 902 aa16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 CHL1O00533 1208 aa16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 CAMTA2O94983 1202 aa16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 DPEP1P16444 411 aa16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 NBPF10Q6P3W6 841 aaKnown RBP16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 NBPF15Q8N660 670 aa16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 SETDB2Q96T68 719 aa16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 PIM2Q9P1W9 311 aa16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 PDZRN3Q9UPQ7 1066 aa16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 ZNF652Q9Y2D9 606 aa16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 RRP7AQ9Y3A4 280 aaKnown RBP16.94■□□□□ 0.3
AL139099.3-201ENST00000556657 KCNA3P22001 575 aa16.93■□□□□ 0.3
AL139099.3-201ENST00000556657 DLG5Q8TDM6 1919 aa16.93■□□□□ 0.3
AL139099.3-201ENST00000556657 ERBB4Q15303 1308 aa16.93■□□□□ 0.3
AL139099.3-201ENST00000556657 TBC1D9BQ66K14 1250 aa16.92■□□□□ 0.3
AL139099.3-201ENST00000556657 PXDNLA1KZ92 1463 aa16.92■□□□□ 0.3
AL139099.3-201ENST00000556657 KIF13BQ9NQT8 1826 aa16.91■□□□□ 0.3
AL139099.3-201ENST00000556657 ERVV-1B6SEH8 477 aa16.91■□□□□ 0.3
AL139099.3-201ENST00000556657 CALD1Q05682 793 aaKnown RBP16.91■□□□□ 0.3
AL139099.3-201ENST00000556657 BICDL1Q6ZP65 573 aa16.91■□□□□ 0.3
AL139099.3-201ENST00000556657 APAF1O14727 1248 aa16.9■□□□□ 0.3
AL139099.3-201ENST00000556657 CFAP44Q96MT7 982 aa16.9■□□□□ 0.3
AL139099.3-201ENST00000556657 BRIP1Q9BX63 1249 aa16.9■□□□□ 0.3
AL139099.3-201ENST00000556657 BCS1LQ9Y276 419 aa16.9■□□□□ 0.3
AL139099.3-201ENST00000556657 CARMIL3Q8ND23 1372 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms