RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 CEP120Q8N960 986 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 ANKRD42Q8N9B4 389 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 IPO4Q8TEX9 1081 aaKnown RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 BTN2A2Q8WVV5 523 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 CCDC43Q96MW1 224 aaKnown RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 TUBB1Q9H4B7 451 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 PFDN4Q9NQP4 134 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 SCHIP1Q9P0W5 487 aaPredicted RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 CHPF2Q9P2E5 772 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 GABBR1Q9UBS5 961 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 SMTNL1A8MU46 457 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 DPYSL4O14531 572 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 DHX16O60231 1041 aaKnown RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 KIF5BP33176 963 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 PLCB3Q01970 1234 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 NUCB1Q02818 461 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 NEXNQ0ZGT2 675 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 SH3D19Q5HYK7 790 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 SHQ1Q6PI26 577 aaKnown RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 OLFM4Q6UX06 510 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 TSHZ1Q6ZSZ6 1077 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 UBE2Q1Q7Z7E8 422 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 FERMT2Q96AC1 680 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 GBP4Q96PP9 640 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 CDC6Q99741 560 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 RSPH9Q9H1X1 276 aaPredicted RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 ANO2Q9NQ90 1003 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 TSKSQ9UJT2 592 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 LRCH1Q9Y2L9 728 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 C6orf229H3BNL8 230 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 URI1O94763 535 aaPredicted RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 TRIM37O94972 964 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 OATP04181 439 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 POU5F1Q01860 360 aaKnown RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 GJC2Q5T442 439 aaPredicted RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 ALKBH2Q6NS38 261 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 CTR9Q6PD62 1173 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 RSRC2Q7L4I2 434 aaKnown RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 RELL1Q8IUW5 271 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 SMC5Q8IY18 1101 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 RBM33Q96EV2 1170 aaKnown RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 GPR101Q96P66 508 aaPredicted RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 RBSNQ9H1K0 784 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 CYLDQ9NQC7 956 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 GEMIN8Q9NWZ8 242 aaKnown RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 GGT7Q9UJ14 662 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 RASAL2Q9UJF2 1139 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 PCDHB9Q9Y5E1 797 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 IQSEC2Q5JU85 1478 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 hCG_1642624A0A1W2PR95 340 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 RRP9O43818 475 aaKnown RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 CDC45O75419 566 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 MCM4P33991 863 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 SOX5P35711 763 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 PSMC4P43686 418 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 PSMC1P62191 440 aaKnown RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 DDX10Q13206 875 aaKnown RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 RGL3Q3MIN7 710 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 HSP90B2PQ58FF3 399 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 ZKSCAN2Q63HK3 967 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 TRIM68Q6AZZ1 485 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 PNMA8AQ86V59 439 aaPredicted RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 HOMER1Q86YM7 354 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 RASEFQ8IZ41 740 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 MSANTD4Q8NCY6 345 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 CGNQ9P2M7 1197 aaKnown RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 MAGED2Q9UNF1 606 aaPredicted RBP2.17□□□□□ -2.06
KTN1-224ENST00000556631 ZNF652Q9Y2D9 606 aa2.17□□□□□ -2.06
KTN1-224ENST00000556631 MYCP01106 439 aaPredicted RBP2.16□□□□□ -2.06
KTN1-224ENST00000556631 KRT20P35900 424 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 AIMP1Q12904 312 aaKnown RBP2.16□□□□□ -2.06
KTN1-224ENST00000556631 NBPF1Q3BBV0 1214 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 NBPF20Q3BBV1 942 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 TTC31Q49AM3 519 aaPredicted RBP2.16□□□□□ -2.06
KTN1-224ENST00000556631 LRSAM1Q6UWE0 723 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 NBPF11Q86T75 865 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 ZBTB46Q86UZ6 589 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 FLCNQ8NFG4 579 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 ODF2LQ9ULJ1 636 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 GOLGA6L10A0A0M3HER8 536 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 U2AF1L5P0DN76 240 aaPredicted RBP2.16□□□□□ -2.06
KTN1-224ENST00000556631 HSPA4P34932 840 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 U2AF1Q01081 240 aaKnown RBP eCLIP2.16□□□□□ -2.06
KTN1-224ENST00000556631 MYSM1Q5VVJ2 828 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 TBC1D31Q96DN5 1066 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 RWDD1Q9H446 243 aaPredicted RBP2.16□□□□□ -2.06
KTN1-224ENST00000556631 SYNCQ9H7C4 482 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 DIAPH3Q9NSV4 1193 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 ABCF2Q9UG63 623 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 HDAC5Q9UQL6 1122 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 MRFAP1Q9Y605 127 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 DESP17661 470 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 MAPK9P45984 424 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 PIP4K2BP78356 416 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 SARNPP82979 210 aaKnown RBP2.16□□□□□ -2.06
KTN1-224ENST00000556631 DEUP1Q05D60 604 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 VAC14Q08AM6 782 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 MRPL28Q13084 256 aaKnown RBP2.16□□□□□ -2.06
KTN1-224ENST00000556631 RAPGEF1Q13905 1077 aa2.16□□□□□ -2.06
KTN1-224ENST00000556631 FAAH2Q6GMR7 532 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms