RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-215ENST00000556587 SSH1Q8WYL5 1049 aa16.08■□□□□ 0.17
SRSF5-215ENST00000556587 CYP27B1O15528 508 aa16.08■□□□□ 0.16
SRSF5-215ENST00000556587 TATP17735 454 aaPredicted RBP16.08■□□□□ 0.16
SRSF5-215ENST00000556587 HDAC1Q13547 482 aaPredicted RBP16.08■□□□□ 0.16
SRSF5-215ENST00000556587 ARHGAP45Q92619 1136 aa16.07■□□□□ 0.16
SRSF5-215ENST00000556587 UPF2Q9HAU5 1272 aaKnown RBP16.07■□□□□ 0.16
SRSF5-215ENST00000556587 VIRMAQ69YN4 1812 aaKnown RBP16.06■□□□□ 0.16
SRSF5-215ENST00000556587 TRIM27P14373 513 aa16.06■□□□□ 0.16
SRSF5-215ENST00000556587 SKAP1Q86WV1 359 aa16.06■□□□□ 0.16
SRSF5-215ENST00000556587 PCDHB15Q9Y5E8 787 aa16.06■□□□□ 0.16
SRSF5-215ENST00000556587 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
SRSF5-215ENST00000556587 NOB1Q9ULX3 412 aaKnown RBP16.05■□□□□ 0.16
SRSF5-215ENST00000556587 C4BP0C0L5 1744 aa16.04■□□□□ 0.16
SRSF5-215ENST00000556587 POLD1P28340 1107 aa16.04■□□□□ 0.16
SRSF5-215ENST00000556587 COL23A1Q86Y22 540 aaPredicted RBP16.04■□□□□ 0.16
SRSF5-215ENST00000556587 ITPRIPQ8IWB1 547 aa16.04■□□□□ 0.16
SRSF5-215ENST00000556587 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
SRSF5-215ENST00000556587 UBR3Q6ZT12 1888 aa16.03■□□□□ 0.16
SRSF5-215ENST00000556587 HMOX1P09601 288 aa16.03■□□□□ 0.16
SRSF5-215ENST00000556587 NBR1Q14596 966 aa16.02■□□□□ 0.16
SRSF5-215ENST00000556587 NKX1-1Q15270 411 aaPredicted RBP16.02■□□□□ 0.16
SRSF5-215ENST00000556587 MPRIPQ6WCQ1 1025 aa16.02■□□□□ 0.16
SRSF5-215ENST00000556587 CFAP44Q96MT7 982 aa16.02■□□□□ 0.16
SRSF5-215ENST00000556587 PDZRN3Q9UPQ7 1066 aa16.02■□□□□ 0.16
SRSF5-215ENST00000556587 ZNF853P0CG23 659 aa16.01■□□□□ 0.15
SRSF5-215ENST00000556587 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
SRSF5-215ENST00000556587 PHACTR3Q96KR7 559 aa16.01■□□□□ 0.15
SRSF5-215ENST00000556587 EYA1Q99502 592 aa16.01■□□□□ 0.15
SRSF5-215ENST00000556587 BECN1Q14457 450 aa16■□□□□ 0.15
SRSF5-215ENST00000556587 TNNQ9UQP3 1299 aa16■□□□□ 0.15
SRSF5-215ENST00000556587 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
SRSF5-215ENST00000556587 AMIGO3Q86WK7 504 aa15.99■□□□□ 0.15
SRSF5-215ENST00000556587 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
SRSF5-215ENST00000556587 ZBTB40Q9NUA8 1239 aa15.99■□□□□ 0.15
SRSF5-215ENST00000556587 VAMP4O75379 141 aa15.99■□□□□ 0.15
SRSF5-215ENST00000556587 PIGBQ92521 554 aa15.99■□□□□ 0.15
SRSF5-215ENST00000556587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.99■□□□□ 0.153e-22■■□□□ 13.6
SRSF5-215ENST00000556587 GPR162Q16538 588 aa15.98■□□□□ 0.15
SRSF5-215ENST00000556587 TMEM57Q8N5G2 664 aa15.98■□□□□ 0.15
SRSF5-215ENST00000556587 SMC5Q8IY18 1101 aa15.97■□□□□ 0.15
SRSF5-215ENST00000556587 API5Q9BZZ5 524 aaKnown RBP15.97■□□□□ 0.15
SRSF5-215ENST00000556587 MSL1Q68DK7 614 aa15.97■□□□□ 0.15
SRSF5-215ENST00000556587 MRPL50Q8N5N7 158 aaKnown RBP15.97■□□□□ 0.15
SRSF5-215ENST00000556587 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
SRSF5-215ENST00000556587 SPG7Q9UQ90 795 aa15.97■□□□□ 0.15
SRSF5-215ENST00000556587 PLEKHG2Q9H7P9 1386 aa15.97■□□□□ 0.15
SRSF5-215ENST00000556587 EIF4A2Q14240 407 aaKnown RBP15.96■□□□□ 0.15
SRSF5-215ENST00000556587 TWISTNBQ3B726 338 aaPredicted RBP15.96■□□□□ 0.15
SRSF5-215ENST00000556587 MBIPQ9NS73 344 aa15.96■□□□□ 0.15
SRSF5-215ENST00000556587 YBX3P16989 372 aaKnown RBP eCLIP15.95■□□□□ 0.14
SRSF5-215ENST00000556587 HMGB2P26583 209 aaKnown RBP15.95■□□□□ 0.14
SRSF5-215ENST00000556587 CEP350Q5VT06 3117 aa15.95■□□□□ 0.14
SRSF5-215ENST00000556587 EIF5BO60841 1220 aaKnown RBP15.95■□□□□ 0.14
SRSF5-215ENST00000556587 PHKG2P15735 406 aa15.95■□□□□ 0.14
SRSF5-215ENST00000556587 FLAD1Q8NFF5 587 aa15.95■□□□□ 0.14
SRSF5-215ENST00000556587 GCC1Q96CN9 775 aa15.95■□□□□ 0.14
SRSF5-215ENST00000556587 ZNF831Q5JPB2 1677 aa15.94■□□□□ 0.14
SRSF5-215ENST00000556587 IGSF1Q8N6C5 1336 aa15.94■□□□□ 0.14
SRSF5-215ENST00000556587 LOC102724428A0A0B4J2F2 783 aa15.93■□□□□ 0.14
SRSF5-215ENST00000556587 SIK1P57059 783 aa15.93■□□□□ 0.14
SRSF5-215ENST00000556587 SULT6B1Q6IMI4 303 aa15.93■□□□□ 0.14
SRSF5-215ENST00000556587 SMIM5Q71RC9 77 aa15.93■□□□□ 0.14
SRSF5-215ENST00000556587 IFNL2Q8IZJ0 200 aa15.93■□□□□ 0.14
SRSF5-215ENST00000556587 LINC00116Q8NCU8 138 aa15.93■□□□□ 0.14
SRSF5-215ENST00000556587 ASAP1Q9ULH1 1129 aa15.93■□□□□ 0.14
SRSF5-215ENST00000556587 DLG5Q8TDM6 1919 aa15.92■□□□□ 0.14
SRSF5-215ENST00000556587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.92■□□□□ 0.14
SRSF5-215ENST00000556587 DEKP35659 375 aaKnown RBP15.92■□□□□ 0.14
SRSF5-215ENST00000556587 AK7Q96M32 723 aa15.92■□□□□ 0.14
SRSF5-215ENST00000556587 TMOD3Q9NYL9 352 aa15.92■□□□□ 0.14
SRSF5-215ENST00000556587 CD2APQ9Y5K6 639 aa15.92■□□□□ 0.14
SRSF5-215ENST00000556587 COL5A3P25940 1745 aaPredicted RBP15.92■□□□□ 0.14
SRSF5-215ENST00000556587 KDRP35968 1356 aa15.92■□□□□ 0.14
SRSF5-215ENST00000556587 ABCC4O15439 1325 aa15.91■□□□□ 0.14
SRSF5-215ENST00000556587 ITPK1Q13572 414 aa15.91■□□□□ 0.14
SRSF5-215ENST00000556587 ZBTB7BO15156 539 aaPredicted RBP15.91■□□□□ 0.14
SRSF5-215ENST00000556587 NUCB1Q02818 461 aa15.91■□□□□ 0.14
SRSF5-215ENST00000556587 SSFA2P28290 1259 aa15.9■□□□□ 0.14
SRSF5-215ENST00000556587 TBC1D32Q96NH3 1257 aa15.9■□□□□ 0.14
SRSF5-215ENST00000556587 THUMPD2Q9BTF0 503 aaKnown RBP15.9■□□□□ 0.14
SRSF5-215ENST00000556587 ATG3Q9NT62 314 aa15.9■□□□□ 0.14
SRSF5-215ENST00000556587 CHL1O00533 1208 aa15.89■□□□□ 0.13
SRSF5-215ENST00000556587 PHF14O94880 888 aa15.89■□□□□ 0.13
SRSF5-215ENST00000556587 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
SRSF5-215ENST00000556587 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
SRSF5-215ENST00000556587 GRIN3BO60391 1043 aa15.88■□□□□ 0.13
SRSF5-215ENST00000556587 RTF1Q92541 710 aaKnown RBP15.88■□□□□ 0.13
SRSF5-215ENST00000556587 C1QTNF8P60827 252 aa15.88■□□□□ 0.13
SRSF5-215ENST00000556587 TSPYL6Q8N831 410 aa15.88■□□□□ 0.13
SRSF5-215ENST00000556587 GAS2L2Q8NHY3 880 aa15.88■□□□□ 0.13
SRSF5-215ENST00000556587 KIF13BQ9NQT8 1826 aa15.88■□□□□ 0.13
SRSF5-215ENST00000556587 PTPRCP08575 1304 aa15.87■□□□□ 0.13
SRSF5-215ENST00000556587 CHD1LQ86WJ1 897 aa15.87■□□□□ 0.13
SRSF5-215ENST00000556587 SLC4A9Q96Q91 983 aa15.87■□□□□ 0.13
SRSF5-215ENST00000556587 KIAA1551Q9HCM1 1747 aa15.87■□□□□ 0.13
SRSF5-215ENST00000556587 MYH14Q7Z406 1995 aaKnown RBP15.87■□□□□ 0.13
SRSF5-215ENST00000556587 GNPATO15228 680 aa15.86■□□□□ 0.13
SRSF5-215ENST00000556587 ATP6V1AP38606 617 aa15.86■□□□□ 0.13
SRSF5-215ENST00000556587 C8orf58Q8NAV2 365 aa15.86■□□□□ 0.13
SRSF5-215ENST00000556587 ERVV-2B6SEH9 535 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms