RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ESCO1Q5FWF5 840 aa17.7■□□□□ 0.42
ARHGEF40-207ENST00000556399 LMBRD1Q9NUN5 540 aa17.7■□□□□ 0.42
ARHGEF40-207ENST00000556399 CCDC70Q6NSX1 233 aa17.69■□□□□ 0.42
ARHGEF40-207ENST00000556399 ZHX1Q9UKY1 873 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF40-207ENST00000556399 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.69■□□□□ 0.42
ARHGEF40-207ENST00000556399 USHBP1Q8N6Y0 703 aa17.69■□□□□ 0.42
ARHGEF40-207ENST00000556399 JMYQ8N9B5 988 aa17.69■□□□□ 0.42
ARHGEF40-207ENST00000556399 EVI5LQ96CN4 794 aa17.69■□□□□ 0.42
ARHGEF40-207ENST00000556399 SPDYE4A6NLX3 237 aa17.69■□□□□ 0.42
ARHGEF40-207ENST00000556399 HSP90B2PQ58FF3 399 aa17.69■□□□□ 0.42
ARHGEF40-207ENST00000556399 MSH6P52701 1360 aa17.68■□□□□ 0.42
ARHGEF40-207ENST00000556399 F13A1P00488 732 aa17.68■□□□□ 0.42
ARHGEF40-207ENST00000556399 EIF4A2Q14240 407 aaKnown RBP17.68■□□□□ 0.42
ARHGEF40-207ENST00000556399 ZNF165P49910 485 aa17.68■□□□□ 0.42
ARHGEF40-207ENST00000556399 FAM177A1Q8N128 213 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF40-207ENST00000556399 NECAB1Q8N987 351 aa17.68■□□□□ 0.42
ARHGEF40-207ENST00000556399 ATP2B1P20020 1258 aa17.68■□□□□ 0.42
ARHGEF40-207ENST00000556399 ANO10Q9NW15 660 aa17.68■□□□□ 0.42
ARHGEF40-207ENST00000556399 PIK3R4Q99570 1358 aa17.68■□□□□ 0.42
ARHGEF40-207ENST00000556399 CHMLP26374 656 aa17.67■□□□□ 0.42
ARHGEF40-207ENST00000556399 PCMTD1Q96MG8 357 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF40-207ENST00000556399 PPIP5K1Q6PFW1 1433 aa17.67■□□□□ 0.42
ARHGEF40-207ENST00000556399 DNM1Q05193 864 aaKnown RBP17.67■□□□□ 0.42
ARHGEF40-207ENST00000556399 KIF18AQ8NI77 898 aa17.67■□□□□ 0.42
ARHGEF40-207ENST00000556399 ERVK-7P63135 1459 aa17.67■□□□□ 0.42
ARHGEF40-207ENST00000556399 CGNQ9P2M7 1197 aaKnown RBP17.66■□□□□ 0.42
ARHGEF40-207ENST00000556399 ACBD3Q9H3P7 528 aa17.66■□□□□ 0.42
ARHGEF40-207ENST00000556399 TTLL5Q6EMB2 1281 aa17.66■□□□□ 0.42
ARHGEF40-207ENST00000556399 PI4KAP2A4QPH2 592 aa17.66■□□□□ 0.42
ARHGEF40-207ENST00000556399 KIF2AO00139 706 aaPredicted RBP17.66■□□□□ 0.42
ARHGEF40-207ENST00000556399 PI4KAP1Q8N8J0 262 aa17.66■□□□□ 0.42
ARHGEF40-207ENST00000556399 ACEP12821 1306 aa17.65■□□□□ 0.42
ARHGEF40-207ENST00000556399 CCDC158Q5M9N0 1113 aa17.65■□□□□ 0.42
ARHGEF40-207ENST00000556399 TRMT1Q9NXH9 659 aaKnown RBP17.65■□□□□ 0.42
ARHGEF40-207ENST00000556399 CBFA2T2O43439 604 aa17.65■□□□□ 0.42
ARHGEF40-207ENST00000556399 SFPQP23246 707 aaKnown RBP eCLIP17.65■□□□□ 0.42
ARHGEF40-207ENST00000556399 TTC39AQ5SRH9 613 aa17.65■□□□□ 0.42
ARHGEF40-207ENST00000556399 ABCC1P33527 1531 aa17.65■□□□□ 0.42
ARHGEF40-207ENST00000556399 GSPT1P15170 499 aaKnown RBP17.65■□□□□ 0.42
ARHGEF40-207ENST00000556399 FAM200AQ8TCP9 573 aa17.65■□□□□ 0.42
ARHGEF40-207ENST00000556399 PLA2R1Q13018 1463 aa17.65■□□□□ 0.42
ARHGEF40-207ENST00000556399 ZNF518AQ6AHZ1 1483 aa17.65■□□□□ 0.42
ARHGEF40-207ENST00000556399 AK2P54819 239 aa17.65■□□□□ 0.42
ARHGEF40-207ENST00000556399 SMTNL1A8MU46 457 aa17.64■□□□□ 0.41
ARHGEF40-207ENST00000556399 CTAGE5O15320 804 aa17.64■□□□□ 0.41
ARHGEF40-207ENST00000556399 PPP1R9BQ96SB3 815 aa17.64■□□□□ 0.41
ARHGEF40-207ENST00000556399 ERICH4A6NGS2 130 aa17.64■□□□□ 0.41
ARHGEF40-207ENST00000556399 CWC15Q9P013 229 aaKnown RBP17.64■□□□□ 0.41
ARHGEF40-207ENST00000556399 UBXN4Q92575 508 aa17.64■□□□□ 0.41
ARHGEF40-207ENST00000556399 DBF4Q9UBU7 674 aaPredicted RBP17.64■□□□□ 0.41
ARHGEF40-207ENST00000556399 GUCY1B3Q02153 619 aa17.63■□□□□ 0.41
ARHGEF40-207ENST00000556399 FKBP4Q02790 459 aaKnown RBP eCLIP17.63■□□□□ 0.41
ARHGEF40-207ENST00000556399 CCDC186Q7Z3E2 898 aa17.63■□□□□ 0.41
ARHGEF40-207ENST00000556399 ATP10AO60312 1499 aa17.63■□□□□ 0.41
ARHGEF40-207ENST00000556399 SAMD9LQ8IVG5 1584 aa17.63■□□□□ 0.41
ARHGEF40-207ENST00000556399 NEMFO60524 1076 aa17.63■□□□□ 0.41
ARHGEF40-207ENST00000556399 SBNO2Q9Y2G9 1366 aa17.63■□□□□ 0.41
ARHGEF40-207ENST00000556399 ANO6Q4KMQ2 910 aa17.62■□□□□ 0.41
ARHGEF40-207ENST00000556399 RIMS2Q9UQ26 1411 aa17.62■□□□□ 0.41
ARHGEF40-207ENST00000556399 TMEM63CQ9P1W3 806 aa17.62■□□□□ 0.41
ARHGEF40-207ENST00000556399 IL13P35225 146 aa17.62■□□□□ 0.41
ARHGEF40-207ENST00000556399 TCEANC2Q96MN5 208 aa17.62■□□□□ 0.41
ARHGEF40-207ENST00000556399 TBC1D2BQ9UPU7 963 aa17.62■□□□□ 0.41
ARHGEF40-207ENST00000556399 CD2BP2O95400 341 aaKnown RBP17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 ANXA1P04083 346 aa17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 TATP17735 454 aaPredicted RBP17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 BRPF1P55201 1214 aaPredicted RBP17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 STX1AQ16623 288 aa17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 CFAP100Q494V2 611 aa17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 MPRIPQ6WCQ1 1025 aa17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 CCDC94Q9BW85 323 aaPredicted RBP17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 DACT1Q9NYF0 836 aa17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 CTNNA3Q9UI47 895 aa17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 MAP3K2Q9Y2U5 619 aa17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 MTHFSDQ2M296 383 aaKnown RBP17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 FILIP1LQ4L180 1135 aa17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 NPATQ14207 1427 aa17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 ABCC4O15439 1325 aa17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 GTF2E1P29083 439 aaPredicted RBP17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 TERF1P54274 439 aa17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 PKP1Q13835 747 aa17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 SART3Q15020 963 aaKnown RBP17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 LARP1Q6PKG0 1096 aaKnown RBP17.61■□□□□ 0.41
ARHGEF40-207ENST00000556399 TRPM1Q7Z4N2 1603 aa17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 FOXO3O43524 673 aa17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 XBP1P17861 261 aa17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 SYT1P21579 422 aa17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 NOM1Q5C9Z4 860 aaKnown RBP17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 G2E3Q7L622 706 aa17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 FSIP1Q8NA03 581 aa17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 RBM8AQ9Y5S9 174 aaKnown RBP17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 U3KPZ7 1027 aaPredicted RBP17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 CCDC47Q96A33 483 aaKnown RBP17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 PAXBP1Q9Y5B6 917 aa17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 ATP7AQ04656 1500 aa17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 CEP135Q66GS9 1140 aa17.6■□□□□ 0.41
ARHGEF40-207ENST00000556399 ASXL2Q76L83 1435 aa17.59■□□□□ 0.41
ARHGEF40-207ENST00000556399 CAVIN2O95810 425 aa17.59■□□□□ 0.41
ARHGEF40-207ENST00000556399 EVA1CP58658 441 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms