RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 USP42Q9H9J4 1324 aaKnown RBP15.2■□□□□ 0.02
SLIRP-206ENST00000556375 KIF13BQ9NQT8 1826 aa15.2■□□□□ 0.02
SLIRP-206ENST00000556375 TMPOP42166 694 aaKnown RBP15.2■□□□□ 0.02
SLIRP-206ENST00000556375 CCDC146Q8IYE0 955 aa15.2■□□□□ 0.02
SLIRP-206ENST00000556375 ADAMTS8Q9UP79 889 aa15.2■□□□□ 0.02
SLIRP-206ENST00000556375 ANP32CO43423 234 aa15.19■□□□□ 0.02
SLIRP-206ENST00000556375 GYS1P13807 737 aa15.19■□□□□ 0.02
SLIRP-206ENST00000556375 RIPK4P57078 832 aa15.19■□□□□ 0.02
SLIRP-206ENST00000556375 KLHL34Q8N239 644 aa15.19■□□□□ 0.02
SLIRP-206ENST00000556375 NLGN1Q8N2Q7 840 aa15.19■□□□□ 0.02
SLIRP-206ENST00000556375 PNISRQ8TF01 805 aaKnown RBP15.19■□□□□ 0.02
SLIRP-206ENST00000556375 THUMPD2Q9BTF0 503 aaKnown RBP15.19■□□□□ 0.02
SLIRP-206ENST00000556375 BCORQ6W2J9 1755 aa15.19■□□□□ 0.02
SLIRP-206ENST00000556375 MMP10P09238 476 aa15.17■□□□□ 0.02
SLIRP-206ENST00000556375 SRP68Q9UHB9 627 aaKnown RBP15.17■□□□□ 0.02
SLIRP-206ENST00000556375 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
SLIRP-206ENST00000556375 SNRPA1P09661 255 aaKnown RBP15.16■□□□□ 0.02
SLIRP-206ENST00000556375 CANXP27824 592 aaKnown RBP15.16■□□□□ 0.02
SLIRP-206ENST00000556375 EIF5P55010 431 aaKnown RBP15.16■□□□□ 0.02
SLIRP-206ENST00000556375 RRP7AQ9Y3A4 280 aaKnown RBP15.16■□□□□ 0.02
SLIRP-206ENST00000556375 CD2APQ9Y5K6 639 aa15.16■□□□□ 0.02
SLIRP-206ENST00000556375 KIAA1551Q9HCM1 1747 aa15.16■□□□□ 0.02
SLIRP-206ENST00000556375 C10orf71Q711Q0 1435 aa15.16■□□□□ 0.02
SLIRP-206ENST00000556375 ZPR1O75312 459 aa15.15■□□□□ 0.02
SLIRP-206ENST00000556375 NLGN2Q8NFZ4 835 aa15.15■□□□□ 0.02
SLIRP-206ENST00000556375 MIS18AQ9NYP9 233 aa15.15■□□□□ 0.02
SLIRP-206ENST00000556375 NARFQ9UHQ1 456 aa15.15■□□□□ 0.02
SLIRP-206ENST00000556375 A0A087WZG4 1122 aa15.14■□□□□ 0.01
SLIRP-206ENST00000556375 PRAMEF22A3QJZ6 481 aa15.14■□□□□ 0.01
SLIRP-206ENST00000556375 IL6STP40189 918 aaPredicted RBP15.14■□□□□ 0.01
SLIRP-206ENST00000556375 FKBP8Q14318 412 aa15.14■□□□□ 0.01
SLIRP-206ENST00000556375 NEUROD2Q15784 382 aa15.14■□□□□ 0.01
SLIRP-206ENST00000556375 CCDC184Q52MB2 194 aa15.14■□□□□ 0.01
SLIRP-206ENST00000556375 BABAM1Q9NWV8 329 aa15.14■□□□□ 0.01
SLIRP-206ENST00000556375 AFDNP55196 1824 aaKnown RBP15.14■□□□□ 0.01
SLIRP-206ENST00000556375 NRXN2Q9P2S2 1712 aa15.14■□□□□ 0.01
SLIRP-206ENST00000556375 A1BGP04217 495 aa15.13■□□□□ 0.01
SLIRP-206ENST00000556375 USPL1Q5W0Q7 1092 aa15.13■□□□□ 0.01
SLIRP-206ENST00000556375 TSPYL4Q9UJ04 414 aa15.13■□□□□ 0.01
SLIRP-206ENST00000556375 TRIM35Q9UPQ4 493 aa15.13■□□□□ 0.01
SLIRP-206ENST00000556375 USP16Q9Y5T5 823 aa15.13■□□□□ 0.01
SLIRP-206ENST00000556375 GOLGB1Q14789 3259 aaKnown RBP15.13■□□□□ 0.01
SLIRP-206ENST00000556375 CHD4Q14839 1912 aa15.12■□□□□ 0.01
SLIRP-206ENST00000556375 EIF4A1P60842 406 aaKnown RBP15.12■□□□□ 0.01
SLIRP-206ENST00000556375 MRS2Q9HD23 443 aa15.12■□□□□ 0.01
SLIRP-206ENST00000556375 PARP3Q9Y6F1 533 aa15.12■□□□□ 0.01
SLIRP-206ENST00000556375 N4BP2Q86UW6 1770 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-206ENST00000556375 UTRNP46939 3433 aa15.11■□□□□ 0.01
SLIRP-206ENST00000556375 GIGYF1O75420 1035 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-206ENST00000556375 DDR1Q08345 913 aa15.11■□□□□ 0.01
SLIRP-206ENST00000556375 BCL2L12Q9HB09 334 aa15.11■□□□□ 0.01
SLIRP-206ENST00000556375 ZNF330Q9Y3S2 320 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-206ENST00000556375 BRCA1P38398 1863 aaKnown RBP15.11■□□□□ 0.01
SLIRP-206ENST00000556375 PXDNLA1KZ92 1463 aa15.1■□□□□ 0.01
SLIRP-206ENST00000556375 APAF1O14727 1248 aa15.1■□□□□ 0.01
SLIRP-206ENST00000556375 NPM2Q86SE8 214 aaKnown RBP15.1■□□□□ 0.01
SLIRP-206ENST00000556375 POLRMTO00411 1230 aaKnown RBP15.09■□□□□ 0.01
SLIRP-206ENST00000556375 TM4SF1P30408 202 aa15.09■□□□□ 0.01
SLIRP-206ENST00000556375 NBPF26B4DH59 902 aa15.08■□□□□ 0
SLIRP-206ENST00000556375 PIP4K2AP48426 406 aaPredicted RBP15.08■□□□□ 0
SLIRP-206ENST00000556375 NFIXQ14938 502 aa15.08■□□□□ 0
SLIRP-206ENST00000556375 GPR162Q16538 588 aa15.08■□□□□ 0
SLIRP-206ENST00000556375 NBPF10Q6P3W6 841 aaKnown RBP15.08■□□□□ 0
SLIRP-206ENST00000556375 NBPF15Q8N660 670 aa15.08■□□□□ 0
SLIRP-206ENST00000556375 DLEC1Q9Y238 1755 aa15.07■□□□□ 0
SLIRP-206ENST00000556375 CHL1O00533 1208 aa15.07■□□□□ 0
SLIRP-206ENST00000556375 CAMTA2O94983 1202 aa15.07■□□□□ 0
SLIRP-206ENST00000556375 DZIP3Q86Y13 1208 aaKnown RBP15.07■□□□□ 0
SLIRP-206ENST00000556375 TBC1D2BQ9UPU7 963 aa15.07■□□□□ 0
SLIRP-206ENST00000556375 ERBB4Q15303 1308 aa15.07■□□□□ 0
SLIRP-206ENST00000556375 TGFB2P61812 414 aa15.06■□□□□ 0
SLIRP-206ENST00000556375 CALD1Q05682 793 aaKnown RBP15.06■□□□□ 0
SLIRP-206ENST00000556375 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
SLIRP-206ENST00000556375 CARMIL3Q8ND23 1372 aa15.06■□□□□ 0
SLIRP-206ENST00000556375 ANKRD31Q8N7Z5 1873 aa15.06■□□□□ 0
SLIRP-206ENST00000556375 RGL2O15211 777 aa15.05■□□□□ -0
SLIRP-206ENST00000556375 YBX3P16989 372 aaKnown RBP eCLIP15.05■□□□□ -0
SLIRP-206ENST00000556375 CFAP44Q96MT7 982 aa15.05■□□□□ -0
SLIRP-206ENST00000556375 LAS1LQ9Y4W2 734 aaKnown RBP15.05■□□□□ -0
SLIRP-206ENST00000556375 NUP98P52948 1817 aa15.05■□□□□ -0
SLIRP-206ENST00000556375 ARFGEF1Q9Y6D6 1849 aa15.05■□□□□ -0
SLIRP-206ENST00000556375 TBC1D9BQ66K14 1250 aa15.04■□□□□ -0
SLIRP-206ENST00000556375 IFT57Q9NWB7 429 aa15.04■□□□□ -0
SLIRP-206ENST00000556375 ZNF652Q9Y2D9 606 aa15.04■□□□□ -0
SLIRP-206ENST00000556375 SERPINB2P05120 415 aa15.03■□□□□ -0
SLIRP-206ENST00000556375 ZNF853P0CG23 659 aa15.03■□□□□ -0
SLIRP-206ENST00000556375 CLEC4GQ6UXB4 293 aa15.03■□□□□ -0
SLIRP-206ENST00000556375 GRIN3BO60391 1043 aa15.02■□□□□ -0
SLIRP-206ENST00000556375 HOXB7P09629 217 aa15.02■□□□□ -0
SLIRP-206ENST00000556375 GNAI1P63096 354 aa15.02■□□□□ -0
SLIRP-206ENST00000556375 CCDC27Q2M243 656 aa15.02■□□□□ -0
SLIRP-206ENST00000556375 NCBP3Q53F19 620 aaKnown RBP15.02■□□□□ -0
SLIRP-206ENST00000556375 BICDL1Q6ZP65 573 aa15.02■□□□□ -0
SLIRP-206ENST00000556375 MBIPQ9NS73 344 aa15.02■□□□□ -0
SLIRP-206ENST00000556375 COL11A2P13942 1736 aaPredicted RBP15.02□□□□□ -0.01
SLIRP-206ENST00000556375 ANKRD36CQ5JPF3 1778 aa15.01□□□□□ -0.01
SLIRP-206ENST00000556375 MYL6BP14649 208 aa15.01□□□□□ -0.01
SLIRP-206ENST00000556375 DPEP1P16444 411 aa15.01□□□□□ -0.01
SLIRP-206ENST00000556375 YY1P25490 414 aa15.01□□□□□ -0.01
SLIRP-206ENST00000556375 KRT24Q2M2I5 525 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms