RNA–Protein interactions for RNA: ENST00000556330.5

SRSF5-213, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-213ENST00000556330 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
SRSF5-213ENST00000556330 CCT4P50991 539 aaKnown RBP12.09□□□□□ -0.47
SRSF5-213ENST00000556330 RWDD1Q9H446 243 aaPredicted RBP12.09□□□□□ -0.47
SRSF5-213ENST00000556330 MIS18AQ9NYP9 233 aa12.09□□□□□ -0.47
SRSF5-213ENST00000556330 DBF4Q9UBU7 674 aaPredicted RBP12.09□□□□□ -0.47
SRSF5-213ENST00000556330 TNS2Q63HR2 1409 aa12.09□□□□□ -0.47
SRSF5-213ENST00000556330 SPATA31A1Q5TZJ5 1347 aa12.09□□□□□ -0.47
SRSF5-213ENST00000556330 PXDNLA1KZ92 1463 aa12.08□□□□□ -0.47
SRSF5-213ENST00000556330 INTS3Q68E01 1043 aaKnown RBP12.08□□□□□ -0.48
SRSF5-213ENST00000556330 UNC5CLQ8IV45 518 aa12.08□□□□□ -0.48
SRSF5-213ENST00000556330 FMNL2Q96PY5 1086 aa12.08□□□□□ -0.48
SRSF5-213ENST00000556330 NRAPQ86VF7 1730 aa12.08□□□□□ -0.48
SRSF5-213ENST00000556330 ERBB4Q15303 1308 aa12.08□□□□□ -0.48
SRSF5-213ENST00000556330 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
SRSF5-213ENST00000556330 SNRPA1P09661 255 aaKnown RBP12.07□□□□□ -0.48
SRSF5-213ENST00000556330 RLBP1P12271 317 aa12.07□□□□□ -0.48
SRSF5-213ENST00000556330 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
SRSF5-213ENST00000556330 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
SRSF5-213ENST00000556330 HYPKQ9NX55 129 aa12.07□□□□□ -0.48
SRSF5-213ENST00000556330 SPATA31A5Q5VU36 1347 aa12.07□□□□□ -0.48
SRSF5-213ENST00000556330 SPATA31A7Q8IWB4 1347 aa12.07□□□□□ -0.48
SRSF5-213ENST00000556330 NUTM2BA6NNL0 878 aaPredicted RBP12.06□□□□□ -0.48
SRSF5-213ENST00000556330 NUTM2EB1AL46 878 aaPredicted RBP12.06□□□□□ -0.48
SRSF5-213ENST00000556330 DDX58O95786 925 aaKnown RBP12.06□□□□□ -0.48
SRSF5-213ENST00000556330 FLIIQ13045 1269 aa12.06□□□□□ -0.48
SRSF5-213ENST00000556330 VPS72Q15906 364 aa12.06□□□□□ -0.48
SRSF5-213ENST00000556330 NUTM2AQ8IVF1 878 aaPredicted RBP12.06□□□□□ -0.48
SRSF5-213ENST00000556330 TMEM57Q8N5G2 664 aa12.06□□□□□ -0.48
SRSF5-213ENST00000556330 HDAC5Q9UQL6 1122 aa12.06□□□□□ -0.48
SRSF5-213ENST00000556330 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
SRSF5-213ENST00000556330 VIRMAQ69YN4 1812 aaKnown RBP12.05□□□□□ -0.48
SRSF5-213ENST00000556330 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
SRSF5-213ENST00000556330 HDAC1Q13547 482 aaPredicted RBP12.05□□□□□ -0.48
SRSF5-213ENST00000556330 KRT24Q2M2I5 525 aa12.05□□□□□ -0.48
SRSF5-213ENST00000556330 DDX54Q8TDD1 881 aaKnown RBP12.05□□□□□ -0.48
SRSF5-213ENST00000556330 NGLY1Q96IV0 654 aa12.05□□□□□ -0.48
SRSF5-213ENST00000556330 TEX13AQ9BXU3 409 aaPredicted RBP12.05□□□□□ -0.48
SRSF5-213ENST00000556330 ZBTB40Q9NUA8 1239 aa12.05□□□□□ -0.48
SRSF5-213ENST00000556330 TMOD3Q9NYL9 352 aa12.05□□□□□ -0.48
SRSF5-213ENST00000556330 USP35Q9P2H5 1018 aa12.05□□□□□ -0.48
SRSF5-213ENST00000556330 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.05□□□□□ -0.48
SRSF5-213ENST00000556330 KDM2BQ8NHM5 1336 aa12.05□□□□□ -0.48
SRSF5-213ENST00000556330 WNK3Q9BYP7 1800 aa12.04□□□□□ -0.48
SRSF5-213ENST00000556330 PYGBP11216 843 aa12.04□□□□□ -0.48
SRSF5-213ENST00000556330 FKBP5Q13451 457 aaPredicted RBP12.04□□□□□ -0.48
SRSF5-213ENST00000556330 DDB1Q16531 1140 aa12.04□□□□□ -0.48
SRSF5-213ENST00000556330 VSIG10Q8N0Z9 540 aa12.04□□□□□ -0.48
SRSF5-213ENST00000556330 TAOK2Q9UL54 1235 aa12.04□□□□□ -0.48
SRSF5-213ENST00000556330 DDX21Q9NR30 783 aaKnown RBP eCLIP12.03□□□□□ -0.48
SRSF5-213ENST00000556330 SHANK3Q9BYB0 1731 aa12.03□□□□□ -0.48
SRSF5-213ENST00000556330 C19orf67A6NJJ6 358 aa12.02□□□□□ -0.49
SRSF5-213ENST00000556330 HAX1O00165 279 aa12.02□□□□□ -0.49
SRSF5-213ENST00000556330 TCERG1O14776 1098 aaKnown RBP12.02□□□□□ -0.49
SRSF5-213ENST00000556330 ZBTB7BO15156 539 aaPredicted RBP12.02□□□□□ -0.49
SRSF5-213ENST00000556330 GNAI3P08754 354 aa12.02□□□□□ -0.49
SRSF5-213ENST00000556330 MEX3CQ5U5Q3 659 aaKnown RBP12.02□□□□□ -0.49
SRSF5-213ENST00000556330 C8orf37Q96NL8 207 aa12.02□□□□□ -0.49
SRSF5-213ENST00000556330 CCDC9Q9Y3X0 531 aaKnown RBP12.02□□□□□ -0.49
SRSF5-213ENST00000556330 RGS12O14924 1447 aa12.02□□□□□ -0.49
SRSF5-213ENST00000556330 PAPPAQ13219 1627 aa12.01□□□□□ -0.49
SRSF5-213ENST00000556330 RGL2O15211 777 aa12.01□□□□□ -0.49
SRSF5-213ENST00000556330 EIF2S2P20042 333 aaKnown RBP12.01□□□□□ -0.49
SRSF5-213ENST00000556330 RPAP2Q8IXW5 612 aaPredicted RBP12.01□□□□□ -0.49
SRSF5-213ENST00000556330 CHPF2Q9P2E5 772 aa12.01□□□□□ -0.49
SRSF5-213ENST00000556330 ATP10DQ9P241 1426 aa12.01□□□□□ -0.49
SRSF5-213ENST00000556330 BCL9LQ86UU0 1499 aa12.01□□□□□ -0.49
SRSF5-213ENST00000556330 POTEHQ6S545 545 aa12□□□□□ -0.49
SRSF5-213ENST00000556330 GCC1Q96CN9 775 aa12□□□□□ -0.49
SRSF5-213ENST00000556330 ZNF496Q96IT1 587 aaPredicted RBP12□□□□□ -0.49
SRSF5-213ENST00000556330 USP21Q9UK80 565 aa12□□□□□ -0.49
SRSF5-213ENST00000556330 KCNQ3O43525 872 aa11.99□□□□□ -0.49
SRSF5-213ENST00000556330 HMMRO75330 724 aa11.99□□□□□ -0.49
SRSF5-213ENST00000556330 HMGB2P26583 209 aaKnown RBP11.99□□□□□ -0.49
SRSF5-213ENST00000556330 HSPA1LP34931 641 aa11.99□□□□□ -0.49
SRSF5-213ENST00000556330 BCL9O00512 1426 aa11.99□□□□□ -0.49
SRSF5-213ENST00000556330 LAMB4A4D0S4 1761 aa11.99□□□□□ -0.49
SRSF5-213ENST00000556330 N4BP2Q86UW6 1770 aaPredicted RBP11.99□□□□□ -0.49
SRSF5-213ENST00000556330 UBR2Q8IWV8 1755 aa11.99□□□□□ -0.49
SRSF5-213ENST00000556330 ALDH1L1O75891 902 aa11.98□□□□□ -0.49
SRSF5-213ENST00000556330 STARD3NLO95772 234 aa11.98□□□□□ -0.49
SRSF5-213ENST00000556330 NEXNQ0ZGT2 675 aa11.98□□□□□ -0.49
SRSF5-213ENST00000556330 SLC39A6Q13433 755 aa11.98□□□□□ -0.49
SRSF5-213ENST00000556330 KSR2Q6VAB6 950 aa11.98□□□□□ -0.49
SRSF5-213ENST00000556330 DNAAF4Q8WXU2 420 aa11.98□□□□□ -0.49
SRSF5-213ENST00000556330 SMARCC1Q92922 1105 aaPredicted RBP11.98□□□□□ -0.49
SRSF5-213ENST00000556330 SRCIN1Q9C0H9 1055 aa11.98□□□□□ -0.49
SRSF5-213ENST00000556330 TRPC5Q9UL62 973 aaPredicted RBP11.98□□□□□ -0.49
SRSF5-213ENST00000556330 TNNQ9UQP3 1299 aa11.98□□□□□ -0.49
SRSF5-213ENST00000556330 RIOK3O14730 519 aaKnown RBP11.97□□□□□ -0.49
SRSF5-213ENST00000556330 GNAI2P04899 355 aa11.97□□□□□ -0.49
SRSF5-213ENST00000556330 SLC4A10Q6U841 1118 aa11.97□□□□□ -0.49
SRSF5-213ENST00000556330 PCDHB15Q9Y5E8 787 aa11.97□□□□□ -0.49
SRSF5-213ENST00000556330 KCPQ6ZWJ8 1503 aa11.96□□□□□ -0.49
SRSF5-213ENST00000556330 G2E3Q7L622 706 aa11.96□□□□□ -0.49
SRSF5-213ENST00000556330 ZNF467Q7Z7K2 595 aaPredicted RBP11.96□□□□□ -0.49
SRSF5-213ENST00000556330 SMC5Q8IY18 1101 aa11.96□□□□□ -0.49
SRSF5-213ENST00000556330 NECTIN2Q92692 538 aa11.96□□□□□ -0.49
SRSF5-213ENST00000556330 PI4KAP2A4QPH2 592 aa11.95□□□□□ -0.5
SRSF5-213ENST00000556330 PI4KAP1Q8N8J0 262 aa11.95□□□□□ -0.5
SRSF5-213ENST00000556330 LINS1Q8NG48 757 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms