RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 CRKLP46109 303 aaKnown RBP14.77□□□□□ -0.05
CHGA-205ENST00000556098 FKBP8Q14318 412 aa14.77□□□□□ -0.05
CHGA-205ENST00000556098 PLEKHO1Q53GL0 409 aaPredicted RBP14.77□□□□□ -0.05
CHGA-205ENST00000556098 C1orf141Q5JVX7 400 aa14.77□□□□□ -0.05
CHGA-205ENST00000556098 POLKQ9UBT6 870 aa14.77□□□□□ -0.05
CHGA-205ENST00000556098 ERVV-2B6SEH9 535 aa14.76□□□□□ -0.05
CHGA-205ENST00000556098 KCNA3P22001 575 aa14.76□□□□□ -0.05
CHGA-205ENST00000556098 FSTL1Q12841 308 aa14.76□□□□□ -0.05
CHGA-205ENST00000556098 RC3H1Q5TC82 1133 aaKnown RBP14.76□□□□□ -0.05
CHGA-205ENST00000556098 DCAF5Q96JK2 942 aa14.76□□□□□ -0.05
CHGA-205ENST00000556098 ADAMTS7Q9UKP4 1686 aa14.76□□□□□ -0.05
CHGA-205ENST00000556098 MTHFSP49914 203 aa14.75□□□□□ -0.05
CHGA-205ENST00000556098 DDR1Q08345 913 aa14.75□□□□□ -0.05
CHGA-205ENST00000556098 AMER1Q5JTC6 1135 aaPredicted RBP14.74□□□□□ -0.05
CHGA-205ENST00000556098 SMC1BQ8NDV3 1235 aa14.74□□□□□ -0.05
CHGA-205ENST00000556098 ANKRD31Q8N7Z5 1873 aa14.74□□□□□ -0.05
CHGA-205ENST00000556098 USP42Q9H9J4 1324 aaKnown RBP14.73□□□□□ -0.05
CHGA-205ENST00000556098 ZPR1O75312 459 aa14.73□□□□□ -0.05
CHGA-205ENST00000556098 USPL1Q5W0Q7 1092 aa14.73□□□□□ -0.05
CHGA-205ENST00000556098 NFATC2IPQ8NCF5 419 aa14.72□□□□□ -0.05
CHGA-205ENST00000556098 ZNF219Q9P2Y4 722 aaPredicted RBP14.72□□□□□ -0.05
CHGA-205ENST00000556098 COL11A2P13942 1736 aaPredicted RBP14.72□□□□□ -0.05
CHGA-205ENST00000556098 NRXN2Q9P2S2 1712 aa14.72□□□□□ -0.05
CHGA-205ENST00000556098 HSPA1AP0DMV8 641 aaKnown RBP14.71□□□□□ -0.05
CHGA-205ENST00000556098 HSPA1BP0DMV9 641 aaKnown RBP14.71□□□□□ -0.05
CHGA-205ENST00000556098 AEBP1Q8IUX7 1158 aa14.71□□□□□ -0.05
CHGA-205ENST00000556098 JMYQ8N9B5 988 aa14.71□□□□□ -0.05
CHGA-205ENST00000556098 FER1L6Q2WGJ9 1857 aa14.7□□□□□ -0.06
CHGA-205ENST00000556098 POLRMTO00411 1230 aaKnown RBP14.7□□□□□ -0.06
CHGA-205ENST00000556098 ZBED9Q6R2W3 1325 aa14.69□□□□□ -0.06
CHGA-205ENST00000556098 AMOTQ4VCS5 1084 aa14.69□□□□□ -0.06
CHGA-205ENST00000556098 SULT6B1Q6IMI4 303 aa14.69□□□□□ -0.06
CHGA-205ENST00000556098 BICDL1Q6ZP65 573 aa14.69□□□□□ -0.06
CHGA-205ENST00000556098 DNAJC10Q8IXB1 793 aa14.69□□□□□ -0.06
CHGA-205ENST00000556098 PNISRQ8TF01 805 aaKnown RBP14.68□□□□□ -0.06
CHGA-205ENST00000556098 VEGFAP15692 232 aaPredicted RBP14.67□□□□□ -0.06
CHGA-205ENST00000556098 PRELPP51888 382 aa14.67□□□□□ -0.06
CHGA-205ENST00000556098 CC2D1BQ5T0F9 858 aaKnown RBP14.67□□□□□ -0.06
CHGA-205ENST00000556098 C2CD5Q86YS7 1000 aa14.67□□□□□ -0.06
CHGA-205ENST00000556098 ZNF330Q9Y3S2 320 aaPredicted RBP14.67□□□□□ -0.06
CHGA-205ENST00000556098 UBR2Q8IWV8 1755 aa14.67□□□□□ -0.06
CHGA-205ENST00000556098 ARFGEF2Q9Y6D5 1785 aa14.66□□□□□ -0.06
CHGA-205ENST00000556098 SCN7AQ01118 1682 aa14.66□□□□□ -0.06
CHGA-205ENST00000556098 COL15A1P39059 1388 aa14.66□□□□□ -0.06
CHGA-205ENST00000556098 LMNB1P20700 586 aa14.66□□□□□ -0.06
CHGA-205ENST00000556098 HNRNPUQ00839 825 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHGA-205ENST00000556098 SLC39A6Q13433 755 aa14.66□□□□□ -0.06
CHGA-205ENST00000556098 INTS5Q6P9B9 1019 aaKnown RBP14.66□□□□□ -0.06
CHGA-205ENST00000556098 MORC1Q86VD1 984 aa14.66□□□□□ -0.06
CHGA-205ENST00000556098 ZNF622Q969S3 477 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHGA-205ENST00000556098 GLTPD2A6NH11 291 aa14.65□□□□□ -0.06
CHGA-205ENST00000556098 SERPINB2P05120 415 aa14.65□□□□□ -0.06
CHGA-205ENST00000556098 CANXP27824 592 aaKnown RBP14.65□□□□□ -0.06
CHGA-205ENST00000556098 TM4SF1P30408 202 aa14.65□□□□□ -0.06
CHGA-205ENST00000556098 NFIXQ14938 502 aa14.65□□□□□ -0.06
CHGA-205ENST00000556098 SOS1Q07889 1333 aaPredicted RBP14.65□□□□□ -0.06
CHGA-205ENST00000556098 SLX4Q8IY92 1834 aa14.64□□□□□ -0.07
CHGA-205ENST00000556098 CARMIL3Q8ND23 1372 aa14.64□□□□□ -0.07
CHGA-205ENST00000556098 NPHP1O15259 732 aa14.64□□□□□ -0.07
CHGA-205ENST00000556098 PPP2R1AP30153 589 aa14.64□□□□□ -0.07
CHGA-205ENST00000556098 CCDC184Q52MB2 194 aa14.64□□□□□ -0.07
CHGA-205ENST00000556098 FAM9BQ8IZU0 186 aa14.64□□□□□ -0.07
CHGA-205ENST00000556098 CCDC24Q8N4L8 307 aa14.64□□□□□ -0.07
CHGA-205ENST00000556098 TTLL6Q8N841 843 aa14.64□□□□□ -0.07
CHGA-205ENST00000556098 MKRN1Q9UHC7 482 aaKnown RBP14.64□□□□□ -0.07
CHGA-205ENST00000556098 H0YIN7 160 aa14.63□□□□□ -0.07
CHGA-205ENST00000556098 ZBTB1Q9Y2K1 713 aa14.63□□□□□ -0.07
CHGA-205ENST00000556098 LGR6Q9HBX8 967 aa14.62□□□□□ -0.07
CHGA-205ENST00000556098 NARFQ9UHQ1 456 aa14.62□□□□□ -0.07
CHGA-205ENST00000556098 ZC3H4Q9UPT8 1303 aaKnown RBP14.62□□□□□ -0.07
CHGA-205ENST00000556098 BCORQ6W2J9 1755 aa14.61□□□□□ -0.07
CHGA-205ENST00000556098 C21orf2O43822 256 aa14.61□□□□□ -0.07
CHGA-205ENST00000556098 HMOX1P09601 288 aa14.61□□□□□ -0.07
CHGA-205ENST00000556098 CYP19A1P11511 503 aaPredicted RBP14.61□□□□□ -0.07
CHGA-205ENST00000556098 AKAP4Q5JQC9 854 aa14.61□□□□□ -0.07
CHGA-205ENST00000556098 DPY19L2Q6NUT2 758 aa14.61□□□□□ -0.07
CHGA-205ENST00000556098 SLC52A2Q9HAB3 445 aa14.61□□□□□ -0.07
CHGA-205ENST00000556098 PCNTO95613 3336 aa14.61□□□□□ -0.07
CHGA-205ENST00000556098 SIPA1L3O60292 1781 aaPredicted RBP14.6□□□□□ -0.07
CHGA-205ENST00000556098 SCN4AP35499 1836 aa14.6□□□□□ -0.07
CHGA-205ENST00000556098 NFKBIEO00221 500 aa14.6□□□□□ -0.07
CHGA-205ENST00000556098 ERFEQ4G0M1 354 aa14.6□□□□□ -0.07
CHGA-205ENST00000556098 NGEFQ8N5V2 710 aa14.6□□□□□ -0.07
CHGA-205ENST00000556098 CNGB1Q14028 1251 aaPredicted RBP14.59□□□□□ -0.07
CHGA-205ENST00000556098 MRC1P22897 1456 aa14.58□□□□□ -0.08
CHGA-205ENST00000556098 RNMTO43148 476 aaKnown RBP14.58□□□□□ -0.08
CHGA-205ENST00000556098 BCL2L12Q9HB09 334 aa14.58□□□□□ -0.08
CHGA-205ENST00000556098 WDR43Q15061 677 aaKnown RBP eCLIP14.57□□□□□ -0.08
CHGA-205ENST00000556098 TTC5Q8N0Z6 440 aa14.57□□□□□ -0.08
CHGA-205ENST00000556098 CFAP53Q96M91 514 aa14.57□□□□□ -0.08
CHGA-205ENST00000556098 POTECB2RU33 542 aa14.56□□□□□ -0.08
CHGA-205ENST00000556098 DDNO94850 711 aaPredicted RBP14.56□□□□□ -0.08
CHGA-205ENST00000556098 POTEIP0CG38 1075 aa14.56□□□□□ -0.08
CHGA-205ENST00000556098 POTEJP0CG39 1038 aa14.56□□□□□ -0.08
CHGA-205ENST00000556098 TBC1D9BQ66K14 1250 aa14.56□□□□□ -0.08
CHGA-205ENST00000556098 CHADLQ6NUI6 762 aa14.56□□□□□ -0.08
CHGA-205ENST00000556098 NPM2Q86SE8 214 aaKnown RBP14.56□□□□□ -0.08
CHGA-205ENST00000556098 TBC1D2BQ9UPU7 963 aa14.56□□□□□ -0.08
CHGA-205ENST00000556098 IL13P35225 146 aa14.55□□□□□ -0.08
CHGA-205ENST00000556098 AIDAQ96BJ3 306 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms