RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CLEC17AQ6ZS10 378 aa8.59□□□□□ -1.03
TDP1-213ENST00000555880 ANO8Q9HCE9 1232 aaPredicted RBP8.59□□□□□ -1.03
TDP1-213ENST00000555880 CWC22Q9HCG8 908 aaKnown RBP8.59□□□□□ -1.03
TDP1-213ENST00000555880 PLSCR2Q9NRY7 297 aa8.59□□□□□ -1.03
TDP1-213ENST00000555880 MIS18AQ9NYP9 233 aa8.59□□□□□ -1.03
TDP1-213ENST00000555880 RGPD8O14715 1765 aaPredicted RBP8.59□□□□□ -1.03
TDP1-213ENST00000555880 IGSF1Q8N6C5 1336 aa8.58□□□□□ -1.04
TDP1-213ENST00000555880 PTPRUQ92729 1446 aa8.58□□□□□ -1.04
TDP1-213ENST00000555880 LRRC37A3O60309 1634 aa8.58□□□□□ -1.04
TDP1-213ENST00000555880 AK9Q5TCS8 1911 aa8.58□□□□□ -1.04
TDP1-213ENST00000555880 PIK3C2AO00443 1686 aa8.58□□□□□ -1.04
TDP1-213ENST00000555880 SSFA2P28290 1259 aa8.58□□□□□ -1.04
TDP1-213ENST00000555880 ILDR1Q86SU0 546 aaPredicted RBP8.58□□□□□ -1.04
TDP1-213ENST00000555880 OTUD7AQ8TE49 926 aaPredicted RBP8.58□□□□□ -1.04
TDP1-213ENST00000555880 PANK2Q9BZ23 570 aa8.58□□□□□ -1.04
TDP1-213ENST00000555880 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.58□□□□□ -1.04
TDP1-213ENST00000555880 N4BP2Q86UW6 1770 aaPredicted RBP8.58□□□□□ -1.04
TDP1-213ENST00000555880 GNAT3A8MTJ3 354 aa8.57□□□□□ -1.04
TDP1-213ENST00000555880 FOXO3O43524 673 aa8.57□□□□□ -1.04
TDP1-213ENST00000555880 MCCP23508 829 aa8.57□□□□□ -1.04
TDP1-213ENST00000555880 ANP32BQ92688 251 aaKnown RBP8.57□□□□□ -1.04
TDP1-213ENST00000555880 OSBPL3Q9H4L5 887 aa8.57□□□□□ -1.04
TDP1-213ENST00000555880 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.57□□□□□ -1.04
TDP1-213ENST00000555880 ANKARQ7Z5J8 1434 aa8.57□□□□□ -1.04
TDP1-213ENST00000555880 CEP170BQ9Y4F5 1589 aaPredicted RBP8.57□□□□□ -1.04
TDP1-213ENST00000555880 F6X3S4 739 aa8.57□□□□□ -1.04
TDP1-213ENST00000555880 BAG4O95429 457 aaKnown RBP8.57□□□□□ -1.04
TDP1-213ENST00000555880 PDE1AP54750 535 aa8.57□□□□□ -1.04
TDP1-213ENST00000555880 NLRP6P59044 892 aa8.57□□□□□ -1.04
TDP1-213ENST00000555880 FKBP5Q13451 457 aaPredicted RBP8.57□□□□□ -1.04
TDP1-213ENST00000555880 KLHL40Q2TBA0 621 aa8.57□□□□□ -1.04
TDP1-213ENST00000555880 TRIM44Q96DX7 344 aaPredicted RBP8.57□□□□□ -1.04
TDP1-213ENST00000555880 EYA1Q99502 592 aa8.57□□□□□ -1.04
TDP1-213ENST00000555880 LRRCC1Q9C099 1032 aa8.57□□□□□ -1.04
TDP1-213ENST00000555880 DDX49Q9Y6V7 483 aaKnown RBP8.57□□□□□ -1.04
TDP1-213ENST00000555880 XRN1Q8IZH2 1706 aaKnown RBP8.56□□□□□ -1.04
TDP1-213ENST00000555880 MAP3K5Q99683 1374 aa8.56□□□□□ -1.04
TDP1-213ENST00000555880 IBTKQ9P2D0 1353 aaPredicted RBP8.56□□□□□ -1.04
TDP1-213ENST00000555880 FLIIQ13045 1269 aa8.56□□□□□ -1.04
TDP1-213ENST00000555880 G2E3Q7L622 706 aa8.56□□□□□ -1.04
TDP1-213ENST00000555880 BABAM1Q9NWV8 329 aa8.56□□□□□ -1.04
TDP1-213ENST00000555880 PXDNLA1KZ92 1463 aa8.56□□□□□ -1.04
TDP1-213ENST00000555880 USP54Q70EL1 1684 aa8.56□□□□□ -1.04
TDP1-213ENST00000555880 C3orf67Q6ZVT6 689 aa8.55□□□□□ -1.04
TDP1-213ENST00000555880 CHMP4AQ9BY43 222 aa8.55□□□□□ -1.04
TDP1-213ENST00000555880 SRCIN1Q9C0H9 1055 aa8.55□□□□□ -1.04
TDP1-213ENST00000555880 RRAGDQ9NQL2 400 aaPredicted RBP8.55□□□□□ -1.04
TDP1-213ENST00000555880 RIOK3O14730 519 aaKnown RBP8.55□□□□□ -1.04
TDP1-213ENST00000555880 MX1P20591 662 aa8.55□□□□□ -1.04
TDP1-213ENST00000555880 MCM2P49736 904 aa8.55□□□□□ -1.04
TDP1-213ENST00000555880 MCTP1Q6DN14 999 aa8.55□□□□□ -1.04
TDP1-213ENST00000555880 EXOC6BQ9Y2D4 811 aa8.55□□□□□ -1.04
TDP1-213ENST00000555880 TUBGCP6Q96RT7 1819 aa8.54□□□□□ -1.04
TDP1-213ENST00000555880 HOXC9P31274 260 aa8.54□□□□□ -1.04
TDP1-213ENST00000555880 TAF7Q15545 349 aaPredicted RBP8.54□□□□□ -1.04
TDP1-213ENST00000555880 EFCAB3Q8N7B9 438 aa8.54□□□□□ -1.04
TDP1-213ENST00000555880 L3MBTL3Q96JM7 780 aaPredicted RBP8.54□□□□□ -1.04
TDP1-213ENST00000555880 TRIM6-TRIM34B2RNG4 842 aa8.53□□□□□ -1.04
TDP1-213ENST00000555880 UBTFL1P0CB47 393 aaPredicted RBP8.53□□□□□ -1.04
TDP1-213ENST00000555880 KCNA6P17658 529 aa8.53□□□□□ -1.04
TDP1-213ENST00000555880 CLCN1P35523 988 aa8.53□□□□□ -1.04
TDP1-213ENST00000555880 ATP8B2P98198 1209 aa8.53□□□□□ -1.04
TDP1-213ENST00000555880 ESYT1Q9BSJ8 1104 aa8.53□□□□□ -1.04
TDP1-213ENST00000555880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.53□□□□□ -1.04
TDP1-213ENST00000555880 NCLP19338 710 aaKnown RBP8.53□□□□□ -1.04
TDP1-213ENST00000555880 NASPP49321 788 aaPredicted RBP8.53□□□□□ -1.04
TDP1-213ENST00000555880 NEK4P51957 841 aa8.53□□□□□ -1.04
TDP1-213ENST00000555880 ANAPC15P60006 121 aa8.53□□□□□ -1.04
TDP1-213ENST00000555880 CCDC173Q0VFZ6 552 aa8.53□□□□□ -1.04
TDP1-213ENST00000555880 ABTB2Q8N961 1025 aa8.53□□□□□ -1.04
TDP1-213ENST00000555880 NECTIN2Q92692 538 aa8.53□□□□□ -1.04
TDP1-213ENST00000555880 ZFP91Q96JP5 570 aaPredicted RBP8.53□□□□□ -1.04
TDP1-213ENST00000555880 AOX1Q06278 1338 aa8.53□□□□□ -1.04
TDP1-213ENST00000555880 MARF1Q9Y4F3 1742 aaKnown RBP8.52□□□□□ -1.04
TDP1-213ENST00000555880 LTN1O94822 1766 aa8.52□□□□□ -1.04
TDP1-213ENST00000555880 ESPNB1AK53 854 aa8.52□□□□□ -1.05
TDP1-213ENST00000555880 CYP2E1P05181 493 aaPredicted RBP8.52□□□□□ -1.05
TDP1-213ENST00000555880 HDGFL1Q5TGJ6 251 aa8.52□□□□□ -1.05
TDP1-213ENST00000555880 C14orf37Q86TY3 774 aa8.52□□□□□ -1.05
TDP1-213ENST00000555880 GAS2L3Q86XJ1 694 aa8.52□□□□□ -1.05
TDP1-213ENST00000555880 RILPL2Q969X0 211 aa8.52□□□□□ -1.05
TDP1-213ENST00000555880 LTV1Q96GA3 475 aaPredicted RBP8.52□□□□□ -1.05
TDP1-213ENST00000555880 LRRFIP2Q9Y608 721 aaKnown RBP8.52□□□□□ -1.05
TDP1-213ENST00000555880 NWD1Q149M9 1564 aa8.52□□□□□ -1.05
TDP1-213ENST00000555880 PNMA6EA0A0J9YXQ4 647 aa8.51□□□□□ -1.05
TDP1-213ENST00000555880 RAB11FIP3O75154 756 aa8.51□□□□□ -1.05
TDP1-213ENST00000555880 NUTM2GQ5VZR2 741 aa8.51□□□□□ -1.05
TDP1-213ENST00000555880 ANO2Q9NQ90 1003 aa8.51□□□□□ -1.05
TDP1-213ENST00000555880 STAP2Q9UGK3 403 aa8.51□□□□□ -1.05
TDP1-213ENST00000555880 SALL3Q9BXA9 1300 aa8.51□□□□□ -1.05
TDP1-213ENST00000555880 CHMLP26374 656 aa8.51□□□□□ -1.05
TDP1-213ENST00000555880 ZNF445P59923 1031 aa8.51□□□□□ -1.05
TDP1-213ENST00000555880 TSHZ3Q63HK5 1081 aa8.51□□□□□ -1.05
TDP1-213ENST00000555880 CAVIN1Q6NZI2 390 aaKnown RBP8.51□□□□□ -1.05
TDP1-213ENST00000555880 ZGPATQ8N5A5 531 aaKnown RBP8.51□□□□□ -1.05
TDP1-213ENST00000555880 IL17REQ8NFR9 667 aa8.51□□□□□ -1.05
TDP1-213ENST00000555880 ADAMTSL3P82987 1691 aa8.5□□□□□ -1.05
TDP1-213ENST00000555880 EPB41L2O43491 1005 aaKnown RBP8.5□□□□□ -1.05
TDP1-213ENST00000555880 TMX3Q96JJ7 454 aa8.5□□□□□ -1.05
TDP1-213ENST00000555880 NAP1L5Q96NT1 182 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms