RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 E9PSI1 815 aa10.19□□□□□ -0.78
LINC00641-202ENST00000555688 DIAPH1O60610 1272 aaKnown RBP10.19□□□□□ -0.78
LINC00641-202ENST00000555688 B4GALNT3Q6L9W6 998 aa10.19□□□□□ -0.78
LINC00641-202ENST00000555688 POLR3EQ9NVU0 708 aa10.19□□□□□ -0.78
LINC00641-202ENST00000555688 RRP7AQ9Y3A4 280 aaKnown RBP10.19□□□□□ -0.78
LINC00641-202ENST00000555688 CLK2P49760 499 aaKnown RBP10.19□□□□□ -0.78
LINC00641-202ENST00000555688 NUTM1Q86Y26 1132 aa10.19□□□□□ -0.78
LINC00641-202ENST00000555688 RDH13Q8NBN7 331 aa10.19□□□□□ -0.78
LINC00641-202ENST00000555688 PROCA1Q8NCQ7 364 aaPredicted RBP10.19□□□□□ -0.78
LINC00641-202ENST00000555688 COG3Q96JB2 828 aa10.19□□□□□ -0.78
LINC00641-202ENST00000555688 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC00641-202ENST00000555688 EMILIN1Q9Y6C2 1016 aa10.19□□□□□ -0.78
LINC00641-202ENST00000555688 U2SURPO15042 1029 aaKnown RBP10.18□□□□□ -0.78
LINC00641-202ENST00000555688 WDR63Q8IWG1 891 aa10.18□□□□□ -0.78
LINC00641-202ENST00000555688 PLIN1O60240 522 aa10.17□□□□□ -0.78
LINC00641-202ENST00000555688 LSM11P83369 360 aaKnown RBP eCLIP10.17□□□□□ -0.78
LINC00641-202ENST00000555688 OVOS2A0A0J9YW53 1432 aa10.17□□□□□ -0.78
LINC00641-202ENST00000555688 OVOS2Q6IE36 1432 aa10.17□□□□□ -0.78
LINC00641-202ENST00000555688 ANKARQ7Z5J8 1434 aa10.17□□□□□ -0.78
LINC00641-202ENST00000555688 IL13P35225 146 aa10.16□□□□□ -0.78
LINC00641-202ENST00000555688 SLC4A3P48751 1232 aa10.16□□□□□ -0.78
LINC00641-202ENST00000555688 EXOC6Q8TAG9 804 aa10.16□□□□□ -0.78
LINC00641-202ENST00000555688 PMFBP1Q8TBY8 1022 aa10.16□□□□□ -0.78
LINC00641-202ENST00000555688 NPHP4O75161 1426 aaPredicted RBP10.16□□□□□ -0.78
LINC00641-202ENST00000555688 CDK12Q9NYV4 1490 aaPredicted RBP10.16□□□□□ -0.78
LINC00641-202ENST00000555688 PPM1GO15355 546 aaPredicted RBP10.16□□□□□ -0.78
LINC00641-202ENST00000555688 SLC10A3P09131 477 aa10.16□□□□□ -0.78
LINC00641-202ENST00000555688 TMPOP42166 694 aaKnown RBP10.16□□□□□ -0.78
LINC00641-202ENST00000555688 GCGRP47871 477 aa10.16□□□□□ -0.78
LINC00641-202ENST00000555688 RRS1Q15050 365 aaKnown RBP10.16□□□□□ -0.78
LINC00641-202ENST00000555688 TUSC1Q2TAM9 212 aa10.16□□□□□ -0.78
LINC00641-202ENST00000555688 ADGRD1Q6QNK2 874 aa10.16□□□□□ -0.78
LINC00641-202ENST00000555688 RIC3Q7Z5B4 369 aa10.16□□□□□ -0.78
LINC00641-202ENST00000555688 FMN2Q9NZ56 1722 aa10.16□□□□□ -0.78
LINC00641-202ENST00000555688 USP31Q70CQ4 1352 aa10.15□□□□□ -0.78
LINC00641-202ENST00000555688 SPTLC1O15269 473 aa10.15□□□□□ -0.78
LINC00641-202ENST00000555688 GJA5P36382 358 aa10.15□□□□□ -0.78
LINC00641-202ENST00000555688 FLIIQ13045 1269 aa10.15□□□□□ -0.78
LINC00641-202ENST00000555688 SLF2Q8IX21 1173 aa10.15□□□□□ -0.78
LINC00641-202ENST00000555688 KDM4AO75164 1064 aa10.14□□□□□ -0.79
LINC00641-202ENST00000555688 SAMD7Q7Z3H4 446 aa10.14□□□□□ -0.79
LINC00641-202ENST00000555688 NALCNQ8IZF0 1738 aa10.14□□□□□ -0.79
LINC00641-202ENST00000555688 TTC21AQ8NDW8 1320 aa10.14□□□□□ -0.79
LINC00641-202ENST00000555688 USP46P62068 366 aa10.14□□□□□ -0.79
LINC00641-202ENST00000555688 C20orf194Q5TEA3 1177 aa10.14□□□□□ -0.79
LINC00641-202ENST00000555688 RSBN1LQ6PCB5 846 aaPredicted RBP10.14□□□□□ -0.79
LINC00641-202ENST00000555688 MRPL50Q8N5N7 158 aaKnown RBP10.14□□□□□ -0.79
LINC00641-202ENST00000555688 NGDNQ8NEJ9 315 aaKnown RBP10.14□□□□□ -0.79
LINC00641-202ENST00000555688 ZFRQ96KR1 1074 aaKnown RBP10.14□□□□□ -0.79
LINC00641-202ENST00000555688 LIMD1Q9UGP4 676 aa10.14□□□□□ -0.79
LINC00641-202ENST00000555688 HRO43593 1189 aa10.13□□□□□ -0.79
LINC00641-202ENST00000555688 PNNQ9H307 717 aaKnown RBP10.13□□□□□ -0.79
LINC00641-202ENST00000555688 LRRC7Q96NW7 1537 aa10.13□□□□□ -0.79
LINC00641-202ENST00000555688 MOXD2PA6NHM9 499 aa10.12□□□□□ -0.79
LINC00641-202ENST00000555688 BCAR3O75815 825 aa10.12□□□□□ -0.79
LINC00641-202ENST00000555688 CCDC136Q96JN2 1154 aa10.12□□□□□ -0.79
LINC00641-202ENST00000555688 PHACTR3Q96KR7 559 aa10.12□□□□□ -0.79
LINC00641-202ENST00000555688 PRKAR2BP31323 418 aa10.11□□□□□ -0.79
LINC00641-202ENST00000555688 CRBNQ96SW2 442 aa10.11□□□□□ -0.79
LINC00641-202ENST00000555688 MAPK8IP3Q9UPT6 1336 aa10.11□□□□□ -0.79
LINC00641-202ENST00000555688 ADGRL3Q9HAR2 1447 aa10.11□□□□□ -0.79
LINC00641-202ENST00000555688 PEAK1Q9H792 1746 aa10.11□□□□□ -0.79
LINC00641-202ENST00000555688 HMOX1P09601 288 aa10.11□□□□□ -0.79
LINC00641-202ENST00000555688 RIPK4P57078 832 aa10.11□□□□□ -0.79
LINC00641-202ENST00000555688 PPP2R2DQ66LE6 453 aa10.11□□□□□ -0.79
LINC00641-202ENST00000555688 NWD1Q149M9 1564 aa10.11□□□□□ -0.79
LINC00641-202ENST00000555688 PIK3C2AO00443 1686 aa10.1□□□□□ -0.79
LINC00641-202ENST00000555688 EIF4A2Q14240 407 aaKnown RBP10.1□□□□□ -0.79
LINC00641-202ENST00000555688 IL16Q14005 1332 aa10.1□□□□□ -0.79
LINC00641-202ENST00000555688 MARF1Q9Y4F3 1742 aaKnown RBP10.09□□□□□ -0.79
LINC00641-202ENST00000555688 HOXA2O43364 376 aa10.09□□□□□ -0.79
LINC00641-202ENST00000555688 NDUFV2P19404 249 aa10.09□□□□□ -0.79
LINC00641-202ENST00000555688 RARSP54136 660 aaKnown RBP10.09□□□□□ -0.79
LINC00641-202ENST00000555688 HSP90AB2PQ58FF8 381 aa10.09□□□□□ -0.79
LINC00641-202ENST00000555688 ZMYND15Q9H091 742 aa10.09□□□□□ -0.79
LINC00641-202ENST00000555688 MYH16Q9H6N6 1097 aa10.09□□□□□ -0.79
LINC00641-202ENST00000555688 NFE2L2Q16236 605 aa10.09□□□□□ -0.79
LINC00641-202ENST00000555688 NECTIN2Q92692 538 aa10.09□□□□□ -0.79
LINC00641-202ENST00000555688 MAP3K19Q56UN5 1328 aa10.08□□□□□ -0.8
LINC00641-202ENST00000555688 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
LINC00641-202ENST00000555688 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.08□□□□□ -0.8
LINC00641-202ENST00000555688 FANCIQ9NVI1 1328 aa10.08□□□□□ -0.8
LINC00641-202ENST00000555688 RGPD1P0DJD0 1748 aa10.07□□□□□ -0.8
LINC00641-202ENST00000555688 RFC5P40937 340 aa10.07□□□□□ -0.8
LINC00641-202ENST00000555688 ANKRD13DQ6ZTN6 518 aa10.07□□□□□ -0.8
LINC00641-202ENST00000555688 TSR2Q969E8 191 aaKnown RBP10.07□□□□□ -0.8
LINC00641-202ENST00000555688 LRCH3Q96II8 777 aa10.07□□□□□ -0.8
LINC00641-202ENST00000555688 AEBP1Q8IUX7 1158 aa10.06□□□□□ -0.8
LINC00641-202ENST00000555688 PCDHB15Q9Y5E8 787 aa10.06□□□□□ -0.8
LINC00641-202ENST00000555688 SBNO1A3KN83 1393 aa10.06□□□□□ -0.8
LINC00641-202ENST00000555688 LILRB3O75022 631 aa10.06□□□□□ -0.8
LINC00641-202ENST00000555688 CFHP08603 1231 aa10.06□□□□□ -0.8
LINC00641-202ENST00000555688 CT47B1P0C2W7 299 aaPredicted RBP10.06□□□□□ -0.8
LINC00641-202ENST00000555688 EXOSC9Q06265 439 aaKnown RBP10.06□□□□□ -0.8
LINC00641-202ENST00000555688 PDE3AQ14432 1141 aa10.06□□□□□ -0.8
LINC00641-202ENST00000555688 ESCO1Q5FWF5 840 aa10.06□□□□□ -0.8
LINC00641-202ENST00000555688 PRPF38BQ5VTL8 546 aaKnown RBP10.06□□□□□ -0.8
LINC00641-202ENST00000555688 PROSER2Q86WR7 435 aaPredicted RBP10.06□□□□□ -0.8
LINC00641-202ENST00000555688 ABTB2Q8N961 1025 aa10.06□□□□□ -0.8
LINC00641-202ENST00000555688 BANK1Q8NDB2 785 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms