RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 ZNF330Q9Y3S2 320 aaPredicted RBP20.53■□□□□ 0.88
SNX6-205ENST00000555648 PXDNLA1KZ92 1463 aa20.53■□□□□ 0.88
SNX6-205ENST00000555648 KCPQ6ZWJ8 1503 aa20.53■□□□□ 0.88
SNX6-205ENST00000555648 HEG1Q9ULI3 1381 aa20.52■□□□□ 0.88
SNX6-205ENST00000555648 DDR1Q08345 913 aa20.52■□□□□ 0.88
SNX6-205ENST00000555648 TJP1Q07157 1748 aa20.51■□□□□ 0.87
SNX6-205ENST00000555648 ARHGAP27Q6ZUM4 889 aa20.51■□□□□ 0.87
SNX6-205ENST00000555648 GPBP1L1Q9HC44 474 aaPredicted RBP20.51■□□□□ 0.87
SNX6-205ENST00000555648 PIM2Q9P1W9 311 aa20.51■□□□□ 0.87
SNX6-205ENST00000555648 POLRMTO00411 1230 aaKnown RBP20.5■□□□□ 0.87
SNX6-205ENST00000555648 TM4SF1P30408 202 aa20.5■□□□□ 0.87
SNX6-205ENST00000555648 ATP10DQ9P241 1426 aa20.5■□□□□ 0.87
SNX6-205ENST00000555648 MYH14Q7Z406 1995 aaKnown RBP20.5■□□□□ 0.87
SNX6-205ENST00000555648 C4AP0C0L4 1744 aa20.5■□□□□ 0.87
SNX6-205ENST00000555648 CEMIPQ8WUJ3 1361 aa20.49■□□□□ 0.87
SNX6-205ENST00000555648 NFIXQ14938 502 aa20.49■□□□□ 0.87
SNX6-205ENST00000555648 MCM10Q7L590 875 aa20.49■□□□□ 0.87
SNX6-205ENST00000555648 ZNF526Q8TF50 670 aaPredicted RBP20.49■□□□□ 0.87
SNX6-205ENST00000555648 PNNQ9H307 717 aaKnown RBP20.49■□□□□ 0.87
SNX6-205ENST00000555648 HTATSF1O43719 755 aaKnown RBP20.48■□□□□ 0.87
SNX6-205ENST00000555648 DALRD3Q5D0E6 543 aaKnown RBP20.48■□□□□ 0.87
SNX6-205ENST00000555648 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
SNX6-205ENST00000555648 SENP3-EIF4A1A0A087X0R7 540 aa20.47■□□□□ 0.87
SNX6-205ENST00000555648 EIF5P55010 431 aaKnown RBP20.47■□□□□ 0.87
SNX6-205ENST00000555648 BICDL1Q6ZP65 573 aa20.47■□□□□ 0.87
SNX6-205ENST00000555648 SERPINB2P05120 415 aa20.46■□□□□ 0.87
SNX6-205ENST00000555648 IL6STP40189 918 aaPredicted RBP20.46■□□□□ 0.87
SNX6-205ENST00000555648 KCNQ3O43525 872 aa20.45■□□□□ 0.86
SNX6-205ENST00000555648 A1BGP04217 495 aa20.45■□□□□ 0.86
SNX6-205ENST00000555648 CHRNA5P30532 468 aa20.45■□□□□ 0.86
SNX6-205ENST00000555648 DCTN1Q14203 1278 aa20.45■□□□□ 0.86
SNX6-205ENST00000555648 UTRNP46939 3433 aa20.44■□□□□ 0.86
SNX6-205ENST00000555648 NPHP1O15259 732 aa20.44■□□□□ 0.86
SNX6-205ENST00000555648 SNRPA1P09661 255 aaKnown RBP20.44■□□□□ 0.86
SNX6-205ENST00000555648 BCL2L12Q9HB09 334 aa20.44■□□□□ 0.86
SNX6-205ENST00000555648 TBC1D2BQ9UPU7 963 aa20.44■□□□□ 0.86
SNX6-205ENST00000555648 MAPK8IP3Q9UPT6 1336 aa20.44■□□□□ 0.86
SNX6-205ENST00000555648 KCNA3P22001 575 aa20.43■□□□□ 0.86
SNX6-205ENST00000555648 RALBP1Q15311 655 aa20.43■□□□□ 0.86
SNX6-205ENST00000555648 TAF7Q15545 349 aaPredicted RBP20.43■□□□□ 0.86
SNX6-205ENST00000555648 ADCY9O60503 1353 aa20.42■□□□□ 0.86
SNX6-205ENST00000555648 PNISRQ8TF01 805 aaKnown RBP20.41■□□□□ 0.86
SNX6-205ENST00000555648 USP16Q9Y5T5 823 aa20.41■□□□□ 0.86
SNX6-205ENST00000555648 DDX10Q13206 875 aaKnown RBP20.4■□□□□ 0.86
SNX6-205ENST00000555648 TBC1D9BQ66K14 1250 aa20.4■□□□□ 0.86
SNX6-205ENST00000555648 DZIP3Q86Y13 1208 aaKnown RBP20.4■□□□□ 0.86
SNX6-205ENST00000555648 SETDB2Q96T68 719 aa20.4■□□□□ 0.86
SNX6-205ENST00000555648 KIF13BQ9NQT8 1826 aa20.39■□□□□ 0.86
SNX6-205ENST00000555648 H0YIN7 160 aa20.39■□□□□ 0.85
SNX6-205ENST00000555648 C2CD5Q86YS7 1000 aa20.39■□□□□ 0.85
SNX6-205ENST00000555648 UBR2Q8IWV8 1755 aa20.39■□□□□ 0.85
SNX6-205ENST00000555648 NFE2L2Q16236 605 aa20.38■□□□□ 0.85
SNX6-205ENST00000555648 ZNF652Q9Y2D9 606 aa20.38■□□□□ 0.85
SNX6-205ENST00000555648 N4BP2Q86UW6 1770 aaPredicted RBP20.38■□□□□ 0.85
SNX6-205ENST00000555648 CARMIL3Q8ND23 1372 aa20.37■□□□□ 0.85
SNX6-205ENST00000555648 C9orf131Q5VYM1 1079 aa20.37■□□□□ 0.85
SNX6-205ENST00000555648 TTLL6Q8N841 843 aa20.37■□□□□ 0.85
SNX6-205ENST00000555648 MIS18AQ9NYP9 233 aa20.37■□□□□ 0.85
SNX6-205ENST00000555648 VIRMAQ69YN4 1812 aaKnown RBP20.37■□□□□ 0.85
SNX6-205ENST00000555648 PRAMEF22A3QJZ6 481 aa20.36■□□□□ 0.85
SNX6-205ENST00000555648 CAMTA2O94983 1202 aa20.36■□□□□ 0.85
SNX6-205ENST00000555648 PDE6BP35913 854 aa20.36■□□□□ 0.85
SNX6-205ENST00000555648 PIP4K2AP48426 406 aaPredicted RBP20.36■□□□□ 0.85
SNX6-205ENST00000555648 PLEKHF1Q96S99 279 aa20.36■□□□□ 0.85
SNX6-205ENST00000555648 PDZRN3Q9UPQ7 1066 aa20.36■□□□□ 0.85
SNX6-205ENST00000555648 ST5P78524 1137 aa20.35■□□□□ 0.85
SNX6-205ENST00000555648 CNBD1Q8NA66 436 aa20.35■□□□□ 0.85
SNX6-205ENST00000555648 ZNF622Q969S3 477 aaKnown RBP eCLIP20.35■□□□□ 0.85
SNX6-205ENST00000555648 RNF181Q9P0P0 153 aa20.35■□□□□ 0.85
SNX6-205ENST00000555648 BRIP1Q9BX63 1249 aa20.34■□□□□ 0.85
SNX6-205ENST00000555648 KIAA1551Q9HCM1 1747 aa20.33■□□□□ 0.85
SNX6-205ENST00000555648 CLEC4GQ6UXB4 293 aa20.33■□□□□ 0.85
SNX6-205ENST00000555648 SIPA1L3O60292 1781 aaPredicted RBP20.32■□□□□ 0.84
SNX6-205ENST00000555648 PRR5LQ6MZQ0 368 aa20.32■□□□□ 0.84
SNX6-205ENST00000555648 CCDC24Q8N4L8 307 aa20.32■□□□□ 0.84
SNX6-205ENST00000555648 THUMPD2Q9BTF0 503 aaKnown RBP20.32■□□□□ 0.84
SNX6-205ENST00000555648 MYBBP1AQ9BQG0 1328 aaKnown RBP20.31■□□□□ 0.84
SNX6-205ENST00000555648 LMOD3Q0VAK6 560 aa20.31■□□□□ 0.84
SNX6-205ENST00000555648 NBPF5PQ86XG9 351 aaPredicted RBP20.31■□□□□ 0.84
SNX6-205ENST00000555648 GOLGB1Q14789 3259 aaKnown RBP20.3■□□□□ 0.84
SNX6-205ENST00000555648 RIPK4P57078 832 aa20.3■□□□□ 0.84
SNX6-205ENST00000555648 KDM2BQ8NHM5 1336 aa20.29■□□□□ 0.84
SNX6-205ENST00000555648 KIF3CO14782 793 aa20.29■□□□□ 0.84
SNX6-205ENST00000555648 WDR43Q15061 677 aaKnown RBP eCLIP20.29■□□□□ 0.84
SNX6-205ENST00000555648 C16orf71Q8IYS4 520 aaPredicted RBP20.29■□□□□ 0.84
SNX6-205ENST00000555648 NGEFQ8N5V2 710 aa20.29■□□□□ 0.84
SNX6-205ENST00000555648 TSPYL4Q9UJ04 414 aa20.29■□□□□ 0.84
SNX6-205ENST00000555648 NIP7Q9Y221 180 aaKnown RBP eCLIP20.29■□□□□ 0.84
SNX6-205ENST00000555648 NBPF26B4DH59 902 aa20.28■□□□□ 0.84
SNX6-205ENST00000555648 GTF2E1P29083 439 aaPredicted RBP20.28■□□□□ 0.84
SNX6-205ENST00000555648 EIF4A1P60842 406 aaKnown RBP20.28■□□□□ 0.84
SNX6-205ENST00000555648 NBPF10Q6P3W6 841 aaKnown RBP20.28■□□□□ 0.84
SNX6-205ENST00000555648 NBPF15Q8N660 670 aa20.28■□□□□ 0.84
SNX6-205ENST00000555648 RRP7AQ9Y3A4 280 aaKnown RBP20.28■□□□□ 0.84
SNX6-205ENST00000555648 RGL2O15211 777 aa20.27■□□□□ 0.84
SNX6-205ENST00000555648 LMNB1P20700 586 aa20.27■□□□□ 0.84
SNX6-205ENST00000555648 RASSF7Q02833 373 aa20.27■□□□□ 0.84
SNX6-205ENST00000555648 TPTE2Q6XPS3 522 aa20.27■□□□□ 0.84
SNX6-205ENST00000555648 CNKSR1Q969H4 720 aa20.27■□□□□ 0.84
SNX6-205ENST00000555648 ZNF219Q9P2Y4 722 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms