RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 FKBP8Q14318 412 aa19.77■□□□□ 0.76
EFCAB11-207ENST00000555608 RTF1Q92541 710 aaKnown RBP19.77■□□□□ 0.76
EFCAB11-207ENST00000555608 PXDNLA1KZ92 1463 aa19.77■□□□□ 0.76
EFCAB11-207ENST00000555608 SCN7AQ01118 1682 aa19.77■□□□□ 0.76
EFCAB11-207ENST00000555608 CANXP27824 592 aaKnown RBP19.76■□□□□ 0.75
EFCAB11-207ENST00000555608 RALBP1Q15311 655 aa19.76■□□□□ 0.75
EFCAB11-207ENST00000555608 AFDNP55196 1824 aaKnown RBP19.76■□□□□ 0.75
EFCAB11-207ENST00000555608 KDM3BQ7LBC6 1761 aa19.75■□□□□ 0.75
EFCAB11-207ENST00000555608 USPL1Q5W0Q7 1092 aa19.75■□□□□ 0.75
EFCAB11-207ENST00000555608 PARP3Q9Y6F1 533 aa19.75■□□□□ 0.75
EFCAB11-207ENST00000555608 BRCA1P38398 1863 aaKnown RBP19.74■□□□□ 0.75
EFCAB11-207ENST00000555608 DDR1Q08345 913 aa19.74■□□□□ 0.75
EFCAB11-207ENST00000555608 FMNL2Q96PY5 1086 aa19.74■□□□□ 0.75
EFCAB11-207ENST00000555608 PLEKHF1Q96S99 279 aa19.74■□□□□ 0.75
EFCAB11-207ENST00000555608 MYBBP1AQ9BQG0 1328 aaKnown RBP19.74■□□□□ 0.75
EFCAB11-207ENST00000555608 LAMB4A4D0S4 1761 aa19.73■□□□□ 0.75
EFCAB11-207ENST00000555608 ZPR1O75312 459 aa19.73■□□□□ 0.75
EFCAB11-207ENST00000555608 BCORQ6W2J9 1755 aa19.72■□□□□ 0.75
EFCAB11-207ENST00000555608 STARD3NLO95772 234 aa19.72■□□□□ 0.75
EFCAB11-207ENST00000555608 NEFMP07197 916 aa19.72■□□□□ 0.75
EFCAB11-207ENST00000555608 ZNF330Q9Y3S2 320 aaPredicted RBP19.72■□□□□ 0.75
EFCAB11-207ENST00000555608 NRXN2Q9P2S2 1712 aa19.71■□□□□ 0.75
EFCAB11-207ENST00000555608 PRAMEF22A3QJZ6 481 aa19.71■□□□□ 0.75
EFCAB11-207ENST00000555608 MAPK8IP3Q9UPT6 1336 aa19.71■□□□□ 0.75
EFCAB11-207ENST00000555608 HTATSF1O43719 755 aaKnown RBP19.7■□□□□ 0.74
EFCAB11-207ENST00000555608 GRIN3BO60391 1043 aa19.7■□□□□ 0.74
EFCAB11-207ENST00000555608 THUMPD2Q9BTF0 503 aaKnown RBP19.7■□□□□ 0.74
EFCAB11-207ENST00000555608 BCL2L12Q9HB09 334 aa19.7■□□□□ 0.74
EFCAB11-207ENST00000555608 NARFQ9UHQ1 456 aa19.7■□□□□ 0.74
EFCAB11-207ENST00000555608 POLRMTO00411 1230 aaKnown RBP19.69■□□□□ 0.74
EFCAB11-207ENST00000555608 A1BGP04217 495 aa19.69■□□□□ 0.74
EFCAB11-207ENST00000555608 PIP4K2AP48426 406 aaPredicted RBP19.69■□□□□ 0.74
EFCAB11-207ENST00000555608 NFE2L2Q16236 605 aa19.69■□□□□ 0.74
EFCAB11-207ENST00000555608 MIS18AQ9NYP9 233 aa19.69■□□□□ 0.74
EFCAB11-207ENST00000555608 A0A0G2JLW4 131 aa19.68■□□□□ 0.74
EFCAB11-207ENST00000555608 EIF5P55010 431 aaKnown RBP19.68■□□□□ 0.74
EFCAB11-207ENST00000555608 TEX13AQ9BXU3 409 aaPredicted RBP19.68■□□□□ 0.74
EFCAB11-207ENST00000555608 DPEP1P16444 411 aa19.67■□□□□ 0.74
EFCAB11-207ENST00000555608 TM4SF1P30408 202 aa19.67■□□□□ 0.74
EFCAB11-207ENST00000555608 NFIXQ14938 502 aa19.67■□□□□ 0.74
EFCAB11-207ENST00000555608 USP16Q9Y5T5 823 aa19.67■□□□□ 0.74
EFCAB11-207ENST00000555608 C1QTNF8P60827 252 aa19.66■□□□□ 0.74
EFCAB11-207ENST00000555608 TGFB2P61812 414 aa19.66■□□□□ 0.74
EFCAB11-207ENST00000555608 TAF7Q15545 349 aaPredicted RBP19.66■□□□□ 0.74
EFCAB11-207ENST00000555608 ARFGEF1Q9Y6D6 1849 aa19.65■□□□□ 0.74
EFCAB11-207ENST00000555608 BICDL1Q6ZP65 573 aa19.65■□□□□ 0.74
EFCAB11-207ENST00000555608 CCDC146Q8IYE0 955 aa19.65■□□□□ 0.74
EFCAB11-207ENST00000555608 TBC1D2BQ9UPU7 963 aa19.65■□□□□ 0.74
EFCAB11-207ENST00000555608 DLEC1Q9Y238 1755 aa19.65■□□□□ 0.74
EFCAB11-207ENST00000555608 A0A087WZG4 1122 aa19.64■□□□□ 0.73
EFCAB11-207ENST00000555608 SENP3-EIF4A1A0A087X0R7 540 aa19.64■□□□□ 0.73
EFCAB11-207ENST00000555608 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.73
EFCAB11-207ENST00000555608 IL6STP40189 918 aaPredicted RBP19.64■□□□□ 0.73
EFCAB11-207ENST00000555608 PNNQ9H307 717 aaKnown RBP19.64■□□□□ 0.73
EFCAB11-207ENST00000555608 BCS1LQ9Y276 419 aa19.64■□□□□ 0.73
EFCAB11-207ENST00000555608 ANKRD31Q8N7Z5 1873 aa19.63■□□□□ 0.73
EFCAB11-207ENST00000555608 CARMIL3Q8ND23 1372 aa19.63■□□□□ 0.73
EFCAB11-207ENST00000555608 SNRPA1P09661 255 aaKnown RBP19.63■□□□□ 0.73
EFCAB11-207ENST00000555608 PRKRIP1Q9H875 184 aaPredicted RBP19.63■□□□□ 0.73
EFCAB11-207ENST00000555608 CHRNA5P30532 468 aa19.62■□□□□ 0.73
EFCAB11-207ENST00000555608 ZEB1P37275 1124 aaPredicted RBP19.62■□□□□ 0.73
EFCAB11-207ENST00000555608 TBC1D9BQ66K14 1250 aa19.62■□□□□ 0.73
EFCAB11-207ENST00000555608 ATP10DQ9P241 1426 aa19.61■□□□□ 0.73
EFCAB11-207ENST00000555608 SERPINB2P05120 415 aa19.61■□□□□ 0.73
EFCAB11-207ENST00000555608 KCNA3P22001 575 aa19.61■□□□□ 0.73
EFCAB11-207ENST00000555608 RIPK4P57078 832 aa19.61■□□□□ 0.73
EFCAB11-207ENST00000555608 WDR43Q15061 677 aaKnown RBP eCLIP19.61■□□□□ 0.73
EFCAB11-207ENST00000555608 RRP7AQ9Y3A4 280 aaKnown RBP19.61■□□□□ 0.73
EFCAB11-207ENST00000555608 COL11A2P13942 1736 aaPredicted RBP19.61■□□□□ 0.73
EFCAB11-207ENST00000555608 CAMTA2O94983 1202 aa19.6■□□□□ 0.73
EFCAB11-207ENST00000555608 NPM2Q86SE8 214 aaKnown RBP19.6■□□□□ 0.73
EFCAB11-207ENST00000555608 DZIP3Q86Y13 1208 aaKnown RBP19.6■□□□□ 0.73
EFCAB11-207ENST00000555608 TMPOP42166 694 aaKnown RBP19.59■□□□□ 0.73
EFCAB11-207ENST00000555608 PNISRQ8TF01 805 aaKnown RBP19.59■□□□□ 0.73
EFCAB11-207ENST00000555608 ADCY9O60503 1353 aa19.58■□□□□ 0.73
EFCAB11-207ENST00000555608 NBPF26B4DH59 902 aa19.58■□□□□ 0.72
EFCAB11-207ENST00000555608 EIF4A1P60842 406 aaKnown RBP19.58■□□□□ 0.72
EFCAB11-207ENST00000555608 NEUROD2Q15784 382 aa19.58■□□□□ 0.72
EFCAB11-207ENST00000555608 NBPF10Q6P3W6 841 aaKnown RBP19.58■□□□□ 0.72
EFCAB11-207ENST00000555608 NBPF15Q8N660 670 aa19.58■□□□□ 0.72
EFCAB11-207ENST00000555608 CACNA1SQ13698 1873 aa19.57■□□□□ 0.72
EFCAB11-207ENST00000555608 CCDC24Q8N4L8 307 aa19.57■□□□□ 0.72
EFCAB11-207ENST00000555608 ZNF526Q8TF50 670 aaPredicted RBP19.56■□□□□ 0.72
EFCAB11-207ENST00000555608 PIM2Q9P1W9 311 aa19.56■□□□□ 0.72
EFCAB11-207ENST00000555608 TSPYL4Q9UJ04 414 aa19.56■□□□□ 0.72
EFCAB11-207ENST00000555608 ADAMTS8Q9UP79 889 aa19.56■□□□□ 0.72
EFCAB11-207ENST00000555608 RUNDC1Q96C34 613 aa19.55■□□□□ 0.72
EFCAB11-207ENST00000555608 DALRD3Q5D0E6 543 aaKnown RBP19.54■□□□□ 0.72
EFCAB11-207ENST00000555608 PRR5LQ6MZQ0 368 aa19.54■□□□□ 0.72
EFCAB11-207ENST00000555608 ARHGAP27Q6ZUM4 889 aa19.54■□□□□ 0.72
EFCAB11-207ENST00000555608 LMOD3Q0VAK6 560 aa19.53■□□□□ 0.72
EFCAB11-207ENST00000555608 NGEFQ8N5V2 710 aa19.53■□□□□ 0.72
EFCAB11-207ENST00000555608 NUP98P52948 1817 aa19.53■□□□□ 0.72
EFCAB11-207ENST00000555608 C2CD5Q86YS7 1000 aa19.52■□□□□ 0.72
EFCAB11-207ENST00000555608 GPBP1L1Q9HC44 474 aaPredicted RBP19.52■□□□□ 0.72
EFCAB11-207ENST00000555608 SETDB2Q96T68 719 aa19.51■□□□□ 0.71
EFCAB11-207ENST00000555608 TRIM35Q9UPQ4 493 aa19.51■□□□□ 0.71
EFCAB11-207ENST00000555608 SBF1O95248 1867 aa19.5■□□□□ 0.71
EFCAB11-207ENST00000555608 NPHP1O15259 732 aa19.5■□□□□ 0.71
EFCAB11-207ENST00000555608 MYL6BP14649 208 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms