RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 TROQ12816 1431 aaPredicted RBP9.66□□□□□ -0.86
LINC00643-203ENST00000555518 MTUS2Q5JR59 1369 aa9.66□□□□□ -0.86
LINC00643-203ENST00000555518 GIGYF1O75420 1035 aaPredicted RBP9.66□□□□□ -0.86
LINC00643-203ENST00000555518 NEDD1Q8NHV4 660 aa9.66□□□□□ -0.86
LINC00643-203ENST00000555518 SUPT6HQ7KZ85 1726 aaKnown RBP9.65□□□□□ -0.86
LINC00643-203ENST00000555518 RIMBP3CA6NJZ7 1639 aa9.65□□□□□ -0.86
LINC00643-203ENST00000555518 RIMBP3BA6NNM3 1639 aa9.65□□□□□ -0.86
LINC00643-203ENST00000555518 RIMBP3Q9UFD9 1639 aa9.65□□□□□ -0.86
LINC00643-203ENST00000555518 CLN3Q13286 438 aa9.65□□□□□ -0.86
LINC00643-203ENST00000555518 DBN1Q16643 649 aa9.65□□□□□ -0.86
LINC00643-203ENST00000555518 PCGF6Q9BYE7 350 aa9.65□□□□□ -0.86
LINC00643-203ENST00000555518 ZCCHC11Q5TAX3 1644 aaKnown RBP9.64□□□□□ -0.87
LINC00643-203ENST00000555518 SPATA31C2B4DYI2 1134 aa9.64□□□□□ -0.87
LINC00643-203ENST00000555518 MSTNO14793 375 aa9.64□□□□□ -0.87
LINC00643-203ENST00000555518 KIF14Q15058 1648 aa9.64□□□□□ -0.87
LINC00643-203ENST00000555518 FBXO45P0C2W1 286 aa9.63□□□□□ -0.87
LINC00643-203ENST00000555518 GAS2L1Q99501 681 aaPredicted RBP9.63□□□□□ -0.87
LINC00643-203ENST00000555518 GRIP2Q9C0E4 1043 aa9.63□□□□□ -0.87
LINC00643-203ENST00000555518 ABCC10Q5T3U5 1492 aa9.63□□□□□ -0.87
LINC00643-203ENST00000555518 MX2P20592 715 aa9.62□□□□□ -0.87
LINC00643-203ENST00000555518 MAP2K3P46734 347 aa9.62□□□□□ -0.87
LINC00643-203ENST00000555518 POU4F2Q12837 409 aa9.62□□□□□ -0.87
LINC00643-203ENST00000555518 NBPF10Q6P3W6 841 aaKnown RBP9.62□□□□□ -0.87
LINC00643-203ENST00000555518 NBPF15Q8N660 670 aa9.62□□□□□ -0.87
LINC00643-203ENST00000555518 GTPBP3Q969Y2 492 aaKnown RBP9.62□□□□□ -0.87
LINC00643-203ENST00000555518 DCAF5Q96JK2 942 aa9.62□□□□□ -0.87
LINC00643-203ENST00000555518 MYOM3Q5VTT5 1437 aa9.62□□□□□ -0.87
LINC00643-203ENST00000555518 GPR25O00155 361 aa9.61□□□□□ -0.87
LINC00643-203ENST00000555518 SOCS7O14512 581 aa9.61□□□□□ -0.87
LINC00643-203ENST00000555518 F11P03951 625 aa9.61□□□□□ -0.87
LINC00643-203ENST00000555518 TAS1R3Q7RTX0 852 aa9.61□□□□□ -0.87
LINC00643-203ENST00000555518 ALYREFQ86V81 257 aaKnown RBP9.61□□□□□ -0.87
LINC00643-203ENST00000555518 FGD6Q6ZV73 1430 aa9.61□□□□□ -0.87
LINC00643-203ENST00000555518 CCNB3Q8WWL7 1395 aa9.61□□□□□ -0.87
LINC00643-203ENST00000555518 NR1H3Q13133 447 aa9.6□□□□□ -0.87
LINC00643-203ENST00000555518 PLA2G4EQ3MJ16 856 aa9.6□□□□□ -0.87
LINC00643-203ENST00000555518 ACDQ96AP0 544 aa9.6□□□□□ -0.87
LINC00643-203ENST00000555518 CFHR5Q9BXR6 569 aa9.6□□□□□ -0.87
LINC00643-203ENST00000555518 NUCKS1Q9H1E3 243 aaKnown RBP9.6□□□□□ -0.87
LINC00643-203ENST00000555518 TIMMDC1Q9NPL8 285 aa9.6□□□□□ -0.87
LINC00643-203ENST00000555518 PHF24Q9UPV7 400 aa9.6□□□□□ -0.87
LINC00643-203ENST00000555518 TCOF1Q13428 1488 aaKnown RBP9.59□□□□□ -0.87
LINC00643-203ENST00000555518 CNTNAP5Q8WYK1 1306 aa9.59□□□□□ -0.87
LINC00643-203ENST00000555518 APBB1O00213 710 aa9.59□□□□□ -0.87
LINC00643-203ENST00000555518 WASLO00401 505 aaPredicted RBP9.59□□□□□ -0.87
LINC00643-203ENST00000555518 CDK11AQ9UQ88 783 aaPredicted RBP9.59□□□□□ -0.87
LINC00643-203ENST00000555518 GPATCH8Q9UKJ3 1502 aaKnown RBP9.58□□□□□ -0.88
LINC00643-203ENST00000555518 PLEKHD1A6NEE1 506 aa9.58□□□□□ -0.88
LINC00643-203ENST00000555518 OIP5O43482 229 aa9.58□□□□□ -0.88
LINC00643-203ENST00000555518 GNRH1P01148 92 aa9.58□□□□□ -0.88
LINC00643-203ENST00000555518 LBRQ14739 615 aaKnown RBP9.58□□□□□ -0.88
LINC00643-203ENST00000555518 GJD4Q96KN9 370 aaPredicted RBP9.58□□□□□ -0.88
LINC00643-203ENST00000555518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.58□□□□□ -0.88
LINC00643-203ENST00000555518 MIA2Q96PC5 1412 aa9.57□□□□□ -0.88
LINC00643-203ENST00000555518 TRAK2O60296 914 aa9.57□□□□□ -0.88
LINC00643-203ENST00000555518 GTF2E1P29083 439 aaPredicted RBP9.57□□□□□ -0.88
LINC00643-203ENST00000555518 PCDHB11Q9Y5F2 797 aa9.57□□□□□ -0.88
LINC00643-203ENST00000555518 TTC37Q6PGP7 1564 aa9.57□□□□□ -0.88
LINC00643-203ENST00000555518 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.56□□□□□ -0.88
LINC00643-203ENST00000555518 WDR7Q9Y4E6 1490 aa9.56□□□□□ -0.88
LINC00643-203ENST00000555518 SPOCK3Q9BQ16 436 aa9.56□□□□□ -0.88
LINC00643-203ENST00000555518 OXCT2Q9BYC2 517 aaPredicted RBP9.56□□□□□ -0.88
LINC00643-203ENST00000555518 CDC42BPAQ5VT25 1732 aa9.56□□□□□ -0.88
LINC00643-203ENST00000555518 PTPN23Q9H3S7 1636 aa9.56□□□□□ -0.88
LINC00643-203ENST00000555518 ASXL2Q76L83 1435 aa9.56□□□□□ -0.88
LINC00643-203ENST00000555518 A0A1B0GTH6 734 aa9.55□□□□□ -0.88
LINC00643-203ENST00000555518 GALNT6Q8NCL4 622 aa9.55□□□□□ -0.88
LINC00643-203ENST00000555518 BANK1Q8NDB2 785 aa9.55□□□□□ -0.88
LINC00643-203ENST00000555518 ESYT1Q9BSJ8 1104 aa9.55□□□□□ -0.88
LINC00643-203ENST00000555518 OSBPL3Q9H4L5 887 aa9.55□□□□□ -0.88
LINC00643-203ENST00000555518 ARHGEF10LQ9HCE6 1279 aa9.55□□□□□ -0.88
LINC00643-203ENST00000555518 GDF2Q9UK05 429 aaPredicted RBP9.55□□□□□ -0.88
LINC00643-203ENST00000555518 ITSN2Q9NZM3 1697 aa9.55□□□□□ -0.88
LINC00643-203ENST00000555518 PIK3R2O00459 728 aa9.54□□□□□ -0.88
LINC00643-203ENST00000555518 ADAM23O75077 832 aa9.54□□□□□ -0.88
LINC00643-203ENST00000555518 MYCP01106 439 aaPredicted RBP9.54□□□□□ -0.88
LINC00643-203ENST00000555518 MKL2Q9ULH7 1088 aa9.54□□□□□ -0.88
LINC00643-203ENST00000555518 PREX2Q70Z35 1606 aa9.53□□□□□ -0.88
LINC00643-203ENST00000555518 MAPKBP1O60336 1514 aa9.53□□□□□ -0.88
LINC00643-203ENST00000555518 SCTRP47872 440 aa9.53□□□□□ -0.88
LINC00643-203ENST00000555518 CNKSR1Q969H4 720 aa9.53□□□□□ -0.88
LINC00643-203ENST00000555518 PTPRKQ15262 1439 aa9.53□□□□□ -0.88
LINC00643-203ENST00000555518 GNASQ5JWF2 1037 aa9.52□□□□□ -0.89
LINC00643-203ENST00000555518 CYB5RLQ6IPT4 315 aa9.52□□□□□ -0.89
LINC00643-203ENST00000555518 CDC42BPBQ9Y5S2 1711 aa9.52□□□□□ -0.89
LINC00643-203ENST00000555518 NDUFB9Q9Y6M9 179 aa9.52□□□□□ -0.89
LINC00643-203ENST00000555518 ABCA9Q8IUA7 1624 aa9.52□□□□□ -0.89
LINC00643-203ENST00000555518 CAMSAP2Q08AD1 1489 aa9.52□□□□□ -0.89
LINC00643-203ENST00000555518 CSB-PGBD3P0DP91 1061 aa9.51□□□□□ -0.89
LINC00643-203ENST00000555518 ESCO1Q5FWF5 840 aa9.51□□□□□ -0.89
LINC00643-203ENST00000555518 PGBD3Q8N328 593 aa9.51□□□□□ -0.89
LINC00643-203ENST00000555518 GOLGA6L1Q8N7Z2 621 aa9.51□□□□□ -0.89
LINC00643-203ENST00000555518 ZSCAN10Q96SZ4 725 aaPredicted RBP9.51□□□□□ -0.89
LINC00643-203ENST00000555518 CENPCQ03188 943 aa9.5□□□□□ -0.89
LINC00643-203ENST00000555518 ARAP3Q8WWN8 1544 aa9.5□□□□□ -0.89
LINC00643-203ENST00000555518 ZNF644Q9H582 1327 aaPredicted RBP9.5□□□□□ -0.89
LINC00643-203ENST00000555518 SAMD9LQ8IVG5 1584 aa9.5□□□□□ -0.89
LINC00643-203ENST00000555518 DNMT1P26358 1616 aaKnown RBP9.49□□□□□ -0.89
LINC00643-203ENST00000555518 PLCH2O75038 1416 aa9.49□□□□□ -0.89
LINC00643-203ENST00000555518 MYO5CQ9NQX4 1742 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms