RNA–Protein interactions for RNA: ENST00000555306.5

APEX1-209, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 898 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-209ENST00000555306 TNS1Q9HBL0 1735 aaKnown RBP15.36■□□□□ 0.05
APEX1-209ENST00000555306 RREB1Q92766 1687 aa15.35■□□□□ 0.05
APEX1-209ENST00000555306 COL5A3P25940 1745 aaPredicted RBP15.35■□□□□ 0.05
APEX1-209ENST00000555306 SLC4A2P04920 1241 aa15.35■□□□□ 0.05
APEX1-209ENST00000555306 SLC27A3Q5K4L6 730 aa15.35■□□□□ 0.05
APEX1-209ENST00000555306 HYPKQ9NX55 129 aa15.35■□□□□ 0.05
APEX1-209ENST00000555306 SUPT16HQ9Y5B9 1047 aaKnown RBP15.35■□□□□ 0.05
APEX1-209ENST00000555306 PTPRCP08575 1304 aa15.35■□□□□ 0.05
APEX1-209ENST00000555306 TAF1LQ8IZX4 1826 aa15.34■□□□□ 0.05
APEX1-209ENST00000555306 PRAMEF22A3QJZ6 481 aa15.34■□□□□ 0.05
APEX1-209ENST00000555306 CYP19A1P11511 503 aaPredicted RBP15.34■□□□□ 0.05
APEX1-209ENST00000555306 MS4A1P11836 297 aa15.34■□□□□ 0.05
APEX1-209ENST00000555306 EIF2S2P20042 333 aaKnown RBP15.34■□□□□ 0.05
APEX1-209ENST00000555306 ATP6V1AP38606 617 aa15.34■□□□□ 0.05
APEX1-209ENST00000555306 RRP1P56182 461 aaKnown RBP15.34■□□□□ 0.05
APEX1-209ENST00000555306 PDIA6Q15084 440 aa15.34■□□□□ 0.05
APEX1-209ENST00000555306 CCDC125Q86Z20 511 aa15.34■□□□□ 0.05
APEX1-209ENST00000555306 DNAJC10Q8IXB1 793 aa15.34■□□□□ 0.05
APEX1-209ENST00000555306 RC3H1Q5TC82 1133 aaKnown RBP15.33■□□□□ 0.04
APEX1-209ENST00000555306 PDE3AQ14432 1141 aa15.32■□□□□ 0.04
APEX1-209ENST00000555306 ZKSCAN2Q63HK3 967 aa15.32■□□□□ 0.04
APEX1-209ENST00000555306 LRP10Q7Z4F1 713 aa15.32■□□□□ 0.04
APEX1-209ENST00000555306 CHPF2Q9P2E5 772 aa15.32■□□□□ 0.04
APEX1-209ENST00000555306 EP400Q96L91 3159 aa15.31■□□□□ 0.04
APEX1-209ENST00000555306 ITPK1Q13572 414 aa15.31■□□□□ 0.04
APEX1-209ENST00000555306 ATF7IPQ6VMQ6 1270 aa15.31■□□□□ 0.04
APEX1-209ENST00000555306 BCL2L13Q9BXK5 485 aa15.31■□□□□ 0.04
APEX1-209ENST00000555306 API5Q9BZZ5 524 aaKnown RBP15.31■□□□□ 0.04
APEX1-209ENST00000555306 CCNL1Q9UK58 526 aaPredicted RBP15.31■□□□□ 0.04
APEX1-209ENST00000555306 NOB1Q9ULX3 412 aaKnown RBP15.31■□□□□ 0.04
APEX1-209ENST00000555306 CNTNAP4Q9C0A0 1308 aa15.31■□□□□ 0.04
APEX1-209ENST00000555306 MYH14Q7Z406 1995 aaKnown RBP15.31■□□□□ 0.04
APEX1-209ENST00000555306 NBPF26B4DH59 902 aa15.3■□□□□ 0.04
APEX1-209ENST00000555306 APBA3O96018 575 aa15.3■□□□□ 0.04
APEX1-209ENST00000555306 IL6STP40189 918 aaPredicted RBP15.3■□□□□ 0.04
APEX1-209ENST00000555306 FLIIQ13045 1269 aa15.3■□□□□ 0.04
APEX1-209ENST00000555306 NBPF14Q5TI25 921 aa15.3■□□□□ 0.04
APEX1-209ENST00000555306 NBPF10Q6P3W6 841 aaKnown RBP15.3■□□□□ 0.04
APEX1-209ENST00000555306 NBPF15Q8N660 670 aa15.3■□□□□ 0.04
APEX1-209ENST00000555306 A1BGP04217 495 aa15.29■□□□□ 0.04
APEX1-209ENST00000555306 INTS5Q6P9B9 1019 aaKnown RBP15.29■□□□□ 0.04
APEX1-209ENST00000555306 NECTIN2Q92692 538 aa15.29■□□□□ 0.04
APEX1-209ENST00000555306 CCDC87Q9NVE4 849 aa15.29■□□□□ 0.04
APEX1-209ENST00000555306 TCERG1O14776 1098 aaKnown RBP15.28■□□□□ 0.04
APEX1-209ENST00000555306 DDX58O95786 925 aaKnown RBP15.28■□□□□ 0.04
APEX1-209ENST00000555306 CRKLP46109 303 aaKnown RBP15.28■□□□□ 0.04
APEX1-209ENST00000555306 ILDR2Q71H61 639 aa15.28■□□□□ 0.04
APEX1-209ENST00000555306 IBTKQ9P2D0 1353 aaPredicted RBP15.27■□□□□ 0.04
APEX1-209ENST00000555306 RGL2O15211 777 aa15.27■□□□□ 0.04
APEX1-209ENST00000555306 TRIM27P14373 513 aa15.27■□□□□ 0.04
APEX1-209ENST00000555306 CANXP27824 592 aaKnown RBP15.27■□□□□ 0.04
APEX1-209ENST00000555306 EIF5P55010 431 aaKnown RBP15.27■□□□□ 0.04
APEX1-209ENST00000555306 TXNRD1Q16881 649 aa15.27■□□□□ 0.04
APEX1-209ENST00000555306 PROSER3Q2NL68 480 aa15.27■□□□□ 0.04
APEX1-209ENST00000555306 G2E3Q7L622 706 aa15.27■□□□□ 0.04
APEX1-209ENST00000555306 PROM2Q8N271 834 aa15.27■□□□□ 0.04
APEX1-209ENST00000555306 LINC00116Q8NCU8 138 aa15.27■□□□□ 0.04
APEX1-209ENST00000555306 FRAT1Q92837 279 aaPredicted RBP15.27■□□□□ 0.04
APEX1-209ENST00000555306 PHAXQ9H814 394 aaKnown RBP15.27■□□□□ 0.04
APEX1-209ENST00000555306 N4BP2Q86UW6 1770 aaPredicted RBP15.26■□□□□ 0.03
APEX1-209ENST00000555306 C4BP0C0L5 1744 aa15.26■□□□□ 0.03
APEX1-209ENST00000555306 ABCC4O15439 1325 aa15.26■□□□□ 0.03
APEX1-209ENST00000555306 SF3B2Q13435 895 aaKnown RBP15.26■□□□□ 0.03
APEX1-209ENST00000555306 KSR2Q6VAB6 950 aa15.26■□□□□ 0.03
APEX1-209ENST00000555306 DZIP1LQ8IYY4 767 aaKnown RBP15.26■□□□□ 0.03
APEX1-209ENST00000555306 LRRC4BQ9NT99 713 aa15.26■□□□□ 0.03
APEX1-209ENST00000555306 PXDNLA1KZ92 1463 aa15.26■□□□□ 0.03
APEX1-209ENST00000555306 PLIN1O60240 522 aa15.25■□□□□ 0.03
APEX1-209ENST00000555306 RPS6KA4O75676 772 aa15.25■□□□□ 0.03
APEX1-209ENST00000555306 MYL6BP14649 208 aa15.25■□□□□ 0.03
APEX1-209ENST00000555306 BAG6P46379 1132 aa15.25■□□□□ 0.03
APEX1-209ENST00000555306 FKBP5Q13451 457 aaPredicted RBP15.25■□□□□ 0.03
APEX1-209ENST00000555306 ERICH6BQ5W0A0 696 aa15.25■□□□□ 0.03
APEX1-209ENST00000555306 COPS6Q7L5N1 327 aa15.25■□□□□ 0.03
APEX1-209ENST00000555306 CAMKK2Q96RR4 588 aa15.25■□□□□ 0.03
APEX1-209ENST00000555306 ZBTB1Q9Y2K1 713 aa15.25■□□□□ 0.03
APEX1-209ENST00000555306 A0A087WZG4 1122 aa15.24■□□□□ 0.03
APEX1-209ENST00000555306 ANXA1P04083 346 aa15.24■□□□□ 0.03
APEX1-209ENST00000555306 NEFLP07196 543 aa15.24■□□□□ 0.03
APEX1-209ENST00000555306 AAMPQ13685 434 aa15.24■□□□□ 0.03
APEX1-209ENST00000555306 INTS3Q68E01 1043 aaKnown RBP15.24■□□□□ 0.03
APEX1-209ENST00000555306 ANKRD13DQ6ZTN6 518 aa15.24■□□□□ 0.03
APEX1-209ENST00000555306 PLBD2Q8NHP8 589 aa15.24■□□□□ 0.03
APEX1-209ENST00000555306 XAGE3Q8WTP9 111 aa15.24■□□□□ 0.03
APEX1-209ENST00000555306 ERVV-1B6SEH8 477 aa15.23■□□□□ 0.03
APEX1-209ENST00000555306 ADRA2BP18089 450 aa15.23■□□□□ 0.03
APEX1-209ENST00000555306 NPM2Q86SE8 214 aaKnown RBP15.23■□□□□ 0.03
APEX1-209ENST00000555306 FTSJ3Q8IY81 847 aaKnown RBP15.23■□□□□ 0.03
APEX1-209ENST00000555306 ATP10DQ9P241 1426 aa15.23■□□□□ 0.03
APEX1-209ENST00000555306 UBR3Q6ZT12 1888 aa15.23■□□□□ 0.03
APEX1-209ENST00000555306 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
APEX1-209ENST00000555306 CCT4P50991 539 aaKnown RBP15.22■□□□□ 0.03
APEX1-209ENST00000555306 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
APEX1-209ENST00000555306 DNAAF4Q8WXU2 420 aa15.22■□□□□ 0.03
APEX1-209ENST00000555306 CHMP4BQ9H444 224 aaKnown RBP15.22■□□□□ 0.03
APEX1-209ENST00000555306 NUP188Q5SRE5 1749 aa15.22■□□□□ 0.03
APEX1-209ENST00000555306 ADCY9O60503 1353 aa15.22■□□□□ 0.03
APEX1-209ENST00000555306 ARFGEF2Q9Y6D5 1785 aa15.21■□□□□ 0.03
APEX1-209ENST00000555306 RTCBQ9Y3I0 505 aaKnown RBP15.21■□□□□ 0.03
APEX1-209ENST00000555306 MAP3K15Q6ZN16 1313 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms