RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 LINC00116Q8NCU8 138 aa22.59■■□□□ 1.21
PSEN1-212ENST00000555254 ZBTB7AO95365 584 aa22.58■■□□□ 1.21
PSEN1-212ENST00000555254 AK7Q96M32 723 aa22.58■■□□□ 1.21
PSEN1-212ENST00000555254 SLC4A9Q96Q91 983 aa22.58■■□□□ 1.21
PSEN1-212ENST00000555254 SMC4Q9NTJ3 1288 aa22.58■■□□□ 1.21
PSEN1-212ENST00000555254 BTBD11A6QL63 1104 aa22.57■■□□□ 1.2
PSEN1-212ENST00000555254 ELL2O00472 640 aaPredicted RBP22.57■■□□□ 1.2
PSEN1-212ENST00000555254 VAMP4O75379 141 aa22.57■■□□□ 1.2
PSEN1-212ENST00000555254 C8orf58Q8NAV2 365 aa22.57■■□□□ 1.2
PSEN1-212ENST00000555254 CHMP4AQ9BY43 222 aa22.57■■□□□ 1.2
PSEN1-212ENST00000555254 PPP1R1BQ9UD71 204 aaPredicted RBP22.57■■□□□ 1.2
PSEN1-212ENST00000555254 LY75O60449 1722 aa22.57■■□□□ 1.2
PSEN1-212ENST00000555254 PLIN1O60240 522 aa22.56■■□□□ 1.2
PSEN1-212ENST00000555254 TTC5Q8N0Z6 440 aa22.56■■□□□ 1.2
PSEN1-212ENST00000555254 IPO8O15397 1037 aaKnown RBP22.55■■□□□ 1.2
PSEN1-212ENST00000555254 MS4A1P11836 297 aa22.55■■□□□ 1.2
PSEN1-212ENST00000555254 FRAT1Q92837 279 aaPredicted RBP22.55■■□□□ 1.2
PSEN1-212ENST00000555254 ATF5Q9Y2D1 282 aaPredicted RBP22.55■■□□□ 1.2
PSEN1-212ENST00000555254 SCN11AQ9UI33 1791 aa22.55■■□□□ 1.2
PSEN1-212ENST00000555254 SOS1Q07889 1333 aaPredicted RBP22.55■■□□□ 1.2
PSEN1-212ENST00000555254 PAPPAQ13219 1627 aa22.54■■□□□ 1.2
PSEN1-212ENST00000555254 SMIM5Q71RC9 77 aa22.54■■□□□ 1.2
PSEN1-212ENST00000555254 TSPYL6Q8N831 410 aa22.54■■□□□ 1.2
PSEN1-212ENST00000555254 SSH1Q8WYL5 1049 aa22.54■■□□□ 1.2
PSEN1-212ENST00000555254 PNPLA7Q6ZV29 1317 aa22.54■■□□□ 1.2
PSEN1-212ENST00000555254 BCL2L13Q9BXK5 485 aa22.53■■□□□ 1.2
PSEN1-212ENST00000555254 SPON1Q9HCB6 807 aa22.53■■□□□ 1.2
PSEN1-212ENST00000555254 MRC1P22897 1456 aa22.53■■□□□ 1.2
PSEN1-212ENST00000555254 GNPATO15228 680 aa22.52■■□□□ 1.2
PSEN1-212ENST00000555254 PHF14O94880 888 aa22.52■■□□□ 1.2
PSEN1-212ENST00000555254 KCNQ3O43525 872 aa22.51■■□□□ 1.19
PSEN1-212ENST00000555254 ZKSCAN2Q63HK3 967 aa22.51■■□□□ 1.19
PSEN1-212ENST00000555254 ZNF790Q6PG37 636 aa22.51■■□□□ 1.19
PSEN1-212ENST00000555254 COL23A1Q86Y22 540 aaPredicted RBP22.51■■□□□ 1.19
PSEN1-212ENST00000555254 DNAJC10Q8IXB1 793 aa22.51■■□□□ 1.19
PSEN1-212ENST00000555254 KIF16BQ96L93 1317 aa22.51■■□□□ 1.19
PSEN1-212ENST00000555254 PDE3AQ14432 1141 aa22.5■■□□□ 1.19
PSEN1-212ENST00000555254 AMIGO3Q86WK7 504 aa22.49■■□□□ 1.19
PSEN1-212ENST00000555254 ZNF496Q96IT1 587 aaPredicted RBP22.49■■□□□ 1.19
PSEN1-212ENST00000555254 ADAMTS7Q9UKP4 1686 aa22.49■■□□□ 1.19
PSEN1-212ENST00000555254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.48■■□□□ 1.19
PSEN1-212ENST00000555254 BRPF1P55201 1214 aaPredicted RBP22.48■■□□□ 1.19
PSEN1-212ENST00000555254 FLAD1Q8NFF5 587 aa22.48■■□□□ 1.19
PSEN1-212ENST00000555254 MTFR1LQ9H019 292 aa22.48■■□□□ 1.19
PSEN1-212ENST00000555254 PPP4R2Q9NY27 417 aa22.48■■□□□ 1.19
PSEN1-212ENST00000555254 C5P01031 1676 aa22.47■■□□□ 1.19
PSEN1-212ENST00000555254 EIF4A1P60842 406 aaKnown RBP22.47■■□□□ 1.19
PSEN1-212ENST00000555254 KRT24Q2M2I5 525 aa22.47■■□□□ 1.19
PSEN1-212ENST00000555254 CCDC30Q5VVM6 783 aa22.47■■□□□ 1.19
PSEN1-212ENST00000555254 MRPL50Q8N5N7 158 aaKnown RBP22.47■■□□□ 1.19
PSEN1-212ENST00000555254 FMNL2Q96PY5 1086 aa22.47■■□□□ 1.19
PSEN1-212ENST00000555254 STK31Q9BXU1 1019 aa22.47■■□□□ 1.19
PSEN1-212ENST00000555254 HOXB7P09629 217 aa22.46■■□□□ 1.19
PSEN1-212ENST00000555254 CRKLP46109 303 aaKnown RBP22.46■■□□□ 1.19
PSEN1-212ENST00000555254 RC3H1Q5TC82 1133 aaKnown RBP22.46■■□□□ 1.19
PSEN1-212ENST00000555254 NOB1Q9ULX3 412 aaKnown RBP22.46■■□□□ 1.19
PSEN1-212ENST00000555254 RTCBQ9Y3I0 505 aaKnown RBP22.46■■□□□ 1.19
PSEN1-212ENST00000555254 C4BP0C0L5 1744 aa22.45■■□□□ 1.19
PSEN1-212ENST00000555254 FTSJ3Q8IY81 847 aaKnown RBP22.45■■□□□ 1.18
PSEN1-212ENST00000555254 VSIG10Q8N0Z9 540 aa22.45■■□□□ 1.18
PSEN1-212ENST00000555254 SLC16A10Q8TF71 515 aa22.45■■□□□ 1.18
PSEN1-212ENST00000555254 SSFA2P28290 1259 aa22.44■■□□□ 1.18
PSEN1-212ENST00000555254 TRAPPC3LQ5T215 181 aa22.44■■□□□ 1.18
PSEN1-212ENST00000555254 MSL1Q68DK7 614 aa22.44■■□□□ 1.18
PSEN1-212ENST00000555254 CRBNQ96SW2 442 aa22.44■■□□□ 1.18
PSEN1-212ENST00000555254 CNTNAP4Q9C0A0 1308 aa22.44■■□□□ 1.18
PSEN1-212ENST00000555254 KCPQ6ZWJ8 1503 aa22.43■■□□□ 1.18
PSEN1-212ENST00000555254 TCERG1O14776 1098 aaKnown RBP22.43■■□□□ 1.18
PSEN1-212ENST00000555254 RPS6KA4O75676 772 aa22.43■■□□□ 1.18
PSEN1-212ENST00000555254 CYP19A1P11511 503 aaPredicted RBP22.43■■□□□ 1.18
PSEN1-212ENST00000555254 INTS5Q6P9B9 1019 aaKnown RBP22.43■■□□□ 1.18
PSEN1-212ENST00000555254 ATF7IPQ6VMQ6 1270 aa22.43■■□□□ 1.18
PSEN1-212ENST00000555254 DZIP1LQ8IYY4 767 aaKnown RBP22.43■■□□□ 1.18
PSEN1-212ENST00000555254 EXOC6Q8TAG9 804 aa22.43■■□□□ 1.18
PSEN1-212ENST00000555254 ARHGAP45Q92619 1136 aa22.43■■□□□ 1.18
PSEN1-212ENST00000555254 CCDC87Q9NVE4 849 aa22.43■■□□□ 1.18
PSEN1-212ENST00000555254 HEG1Q9ULI3 1381 aa22.42■■□□□ 1.18
PSEN1-212ENST00000555254 STARD3NLO95772 234 aa22.42■■□□□ 1.18
PSEN1-212ENST00000555254 C20orf194Q5TEA3 1177 aa22.42■■□□□ 1.18
PSEN1-212ENST00000555254 API5Q9BZZ5 524 aaKnown RBP22.42■■□□□ 1.18
PSEN1-212ENST00000555254 CASZ1Q86V15 1759 aa22.42■■□□□ 1.18
PSEN1-212ENST00000555254 PTGER2P43116 358 aa22.41■■□□□ 1.18
PSEN1-212ENST00000555254 HDGFL1Q5TGJ6 251 aa22.41■■□□□ 1.18
PSEN1-212ENST00000555254 TEX13AQ9BXU3 409 aaPredicted RBP22.41■■□□□ 1.18
PSEN1-212ENST00000555254 TAF1LQ8IZX4 1826 aa22.41■■□□□ 1.18
PSEN1-212ENST00000555254 SLC4A2P04920 1241 aa22.4■■□□□ 1.18
PSEN1-212ENST00000555254 ARHGEF1Q92888 912 aaKnown RBP22.4■■□□□ 1.18
PSEN1-212ENST00000555254 VIRMAQ69YN4 1812 aaKnown RBP22.4■■□□□ 1.18
PSEN1-212ENST00000555254 EIF2S2P20042 333 aaKnown RBP22.39■■□□□ 1.17
PSEN1-212ENST00000555254 POLD1P28340 1107 aa22.39■■□□□ 1.17
PSEN1-212ENST00000555254 RFC4P35249 363 aa22.39■■□□□ 1.17
PSEN1-212ENST00000555254 PRAMEF22A3QJZ6 481 aa22.38■■□□□ 1.17
PSEN1-212ENST00000555254 SNRPA1P09661 255 aaKnown RBP22.38■■□□□ 1.17
PSEN1-212ENST00000555254 PANK1Q8TE04 598 aa22.38■■□□□ 1.17
PSEN1-212ENST00000555254 CLUAP1Q96AJ1 413 aa22.38■■□□□ 1.17
PSEN1-212ENST00000555254 GIGYF1O75420 1035 aaPredicted RBP22.37■■□□□ 1.17
PSEN1-212ENST00000555254 NECTIN2Q92692 538 aa22.37■■□□□ 1.17
PSEN1-212ENST00000555254 ZBTB1Q9Y2K1 713 aa22.37■■□□□ 1.17
PSEN1-212ENST00000555254 USP16Q9Y5T5 823 aa22.37■■□□□ 1.17
PSEN1-212ENST00000555254 ZNF831Q5JPB2 1677 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms