RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PHF8Q9UPP1 1060 aa12.95□□□□□ -0.34
MTHFD1-210ENST00000555252 FAM208AQ9UK61 1670 aaKnown RBP12.94□□□□□ -0.34
MTHFD1-210ENST00000555252 EPB41L2O43491 1005 aaKnown RBP12.94□□□□□ -0.34
MTHFD1-210ENST00000555252 PKP1Q13835 747 aa12.94□□□□□ -0.34
MTHFD1-210ENST00000555252 SDSP20132 328 aa12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 ANAPC15P60006 121 aa12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 ANKLE2Q86XL3 938 aa12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 PIBF1Q8WXW3 757 aa12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 IP6K1Q92551 441 aa12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 CACNA1FO60840 1977 aa12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 LETM1O95202 739 aaPredicted RBP12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 PTMAP06454 111 aaKnown RBP12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 DMTNQ08495 405 aa12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 ZGPATQ8N5A5 531 aaKnown RBP12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 KCNH5Q8NCM2 988 aa12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 IL17REQ8NFR9 667 aa12.93□□□□□ -0.34
MTHFD1-210ENST00000555252 N4BP2Q86UW6 1770 aaPredicted RBP12.92□□□□□ -0.34
MTHFD1-210ENST00000555252 ATP8B2P98198 1209 aa12.92□□□□□ -0.34
MTHFD1-210ENST00000555252 FKBP5Q13451 457 aaPredicted RBP12.92□□□□□ -0.34
MTHFD1-210ENST00000555252 CHD2O14647 1828 aaKnown RBP12.92□□□□□ -0.34
MTHFD1-210ENST00000555252 F6X3S4 739 aa12.92□□□□□ -0.34
MTHFD1-210ENST00000555252 HOXB7P09629 217 aa12.92□□□□□ -0.34
MTHFD1-210ENST00000555252 GTPBP4Q9BZE4 634 aaKnown RBP12.92□□□□□ -0.34
MTHFD1-210ENST00000555252 ADGRL3Q9HAR2 1447 aa12.91□□□□□ -0.34
MTHFD1-210ENST00000555252 SMARCA5O60264 1052 aaPredicted RBP12.91□□□□□ -0.34
MTHFD1-210ENST00000555252 MCCP23508 829 aa12.91□□□□□ -0.34
MTHFD1-210ENST00000555252 PDE1AP54750 535 aa12.91□□□□□ -0.34
MTHFD1-210ENST00000555252 AEBP2Q6ZN18 517 aaPredicted RBP12.91□□□□□ -0.34
MTHFD1-210ENST00000555252 TMEM87AQ8NBN3 555 aa12.91□□□□□ -0.34
MTHFD1-210ENST00000555252 SRCIN1Q9C0H9 1055 aa12.91□□□□□ -0.34
MTHFD1-210ENST00000555252 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
MTHFD1-210ENST00000555252 TPM3P06753 285 aa12.9□□□□□ -0.34
MTHFD1-210ENST00000555252 OTUD7AQ8TE49 926 aaPredicted RBP12.9□□□□□ -0.34
MTHFD1-210ENST00000555252 LRRCC1Q9C099 1032 aa12.9□□□□□ -0.34
MTHFD1-210ENST00000555252 ZNF142P52746 1687 aaPredicted RBP12.9□□□□□ -0.34
MTHFD1-210ENST00000555252 NFAT5O94916 1531 aa12.9□□□□□ -0.34
MTHFD1-210ENST00000555252 CEMIPQ8WUJ3 1361 aa12.9□□□□□ -0.34
MTHFD1-210ENST00000555252 NUTM2GQ5VZR2 741 aa12.9□□□□□ -0.34
MTHFD1-210ENST00000555252 TMX3Q96JJ7 454 aa12.9□□□□□ -0.34
MTHFD1-210ENST00000555252 SPTLC3Q9NUV7 552 aa12.9□□□□□ -0.34
MTHFD1-210ENST00000555252 PHRF1Q9P1Y6 1649 aaKnown RBP12.9□□□□□ -0.34
MTHFD1-210ENST00000555252 AOX1Q06278 1338 aa12.89□□□□□ -0.35
MTHFD1-210ENST00000555252 MED1Q15648 1581 aaPredicted RBP12.89□□□□□ -0.35
MTHFD1-210ENST00000555252 APBB1O00213 710 aa12.89□□□□□ -0.35
MTHFD1-210ENST00000555252 KIF20AO95235 890 aa12.89□□□□□ -0.35
MTHFD1-210ENST00000555252 C14orf37Q86TY3 774 aa12.89□□□□□ -0.35
MTHFD1-210ENST00000555252 LTV1Q96GA3 475 aaPredicted RBP12.89□□□□□ -0.35
MTHFD1-210ENST00000555252 SALL3Q9BXA9 1300 aa12.88□□□□□ -0.35
MTHFD1-210ENST00000555252 LTN1O94822 1766 aa12.88□□□□□ -0.35
MTHFD1-210ENST00000555252 NOLC1Q14978 699 aaKnown RBP eCLIP12.88□□□□□ -0.35
MTHFD1-210ENST00000555252 HDGFL1Q5TGJ6 251 aa12.88□□□□□ -0.35
MTHFD1-210ENST00000555252 STAP2Q9UGK3 403 aa12.88□□□□□ -0.35
MTHFD1-210ENST00000555252 NSFL1CQ9UNZ2 370 aaKnown RBP12.88□□□□□ -0.35
MTHFD1-210ENST00000555252 WDR33Q9C0J8 1336 aaKnown RBP12.88□□□□□ -0.35
MTHFD1-210ENST00000555252 RAB11FIP3O75154 756 aa12.87□□□□□ -0.35
MTHFD1-210ENST00000555252 PSME1Q06323 249 aa12.87□□□□□ -0.35
MTHFD1-210ENST00000555252 UBTFL1P0CB47 393 aaPredicted RBP12.87□□□□□ -0.35
MTHFD1-210ENST00000555252 AMOTQ4VCS5 1084 aa12.87□□□□□ -0.35
MTHFD1-210ENST00000555252 DNTTIP2Q5QJE6 756 aaKnown RBP12.87□□□□□ -0.35
MTHFD1-210ENST00000555252 CCDC183Q5T5S1 534 aa12.87□□□□□ -0.35
MTHFD1-210ENST00000555252 KIF3AQ9Y496 699 aa12.87□□□□□ -0.35
MTHFD1-210ENST00000555252 ZSCAN20P17040 1043 aaPredicted RBP12.86□□□□□ -0.35
MTHFD1-210ENST00000555252 MX1P20591 662 aa12.86□□□□□ -0.35
MTHFD1-210ENST00000555252 NEK4P51957 841 aa12.86□□□□□ -0.35
MTHFD1-210ENST00000555252 PLEKHO1Q53GL0 409 aaPredicted RBP12.86□□□□□ -0.35
MTHFD1-210ENST00000555252 AKAP4Q5JQC9 854 aa12.86□□□□□ -0.35
MTHFD1-210ENST00000555252 DIAPH3Q9NSV4 1193 aa12.86□□□□□ -0.35
MTHFD1-210ENST00000555252 EXOC6BQ9Y2D4 811 aa12.86□□□□□ -0.35
MTHFD1-210ENST00000555252 OVOS2A0A0G2JMS6 1433 aa12.86□□□□□ -0.35
MTHFD1-210ENST00000555252 NCAPD2Q15021 1401 aa12.86□□□□□ -0.35
MTHFD1-210ENST00000555252 EIF4A1P60842 406 aaKnown RBP12.85□□□□□ -0.35
MTHFD1-210ENST00000555252 SSH3Q8TE77 659 aa12.85□□□□□ -0.35
MTHFD1-210ENST00000555252 USP44Q9H0E7 712 aa12.85□□□□□ -0.35
MTHFD1-210ENST00000555252 RNF214Q8ND24 703 aa12.85□□□□□ -0.35
MTHFD1-210ENST00000555252 LMO7Q8WWI1 1683 aa12.85□□□□□ -0.35
MTHFD1-210ENST00000555252 LRRFIP2Q9Y608 721 aaKnown RBP12.85□□□□□ -0.35
MTHFD1-210ENST00000555252 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
MTHFD1-210ENST00000555252 PNMA6EA0A0J9YXQ4 647 aa12.84□□□□□ -0.35
MTHFD1-210ENST00000555252 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
MTHFD1-210ENST00000555252 ESCO1Q5FWF5 840 aa12.84□□□□□ -0.35
MTHFD1-210ENST00000555252 NBPF6Q5VWK0 638 aa12.84□□□□□ -0.35
MTHFD1-210ENST00000555252 NBPF4Q96M43 638 aa12.84□□□□□ -0.35
MTHFD1-210ENST00000555252 USHBP1Q8N6Y0 703 aa12.84□□□□□ -0.35
MTHFD1-210ENST00000555252 NECTIN2Q92692 538 aa12.84□□□□□ -0.35
MTHFD1-210ENST00000555252 ESYT1Q9BSJ8 1104 aa12.84□□□□□ -0.35
MTHFD1-210ENST00000555252 HDAC5Q9UQL6 1122 aa12.84□□□□□ -0.35
MTHFD1-210ENST00000555252 SLIT3O75094 1523 aa12.83□□□□□ -0.36
MTHFD1-210ENST00000555252 TEFQ10587 303 aa12.83□□□□□ -0.36
MTHFD1-210ENST00000555252 CHAF1AQ13111 956 aaPredicted RBP12.83□□□□□ -0.36
MTHFD1-210ENST00000555252 POLA2Q14181 598 aa12.83□□□□□ -0.36
MTHFD1-210ENST00000555252 HSP90AB4PQ58FF6 505 aa12.83□□□□□ -0.36
MTHFD1-210ENST00000555252 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.36
MTHFD1-210ENST00000555252 LMTK3Q96Q04 1460 aa12.83□□□□□ -0.36
MTHFD1-210ENST00000555252 RPAP1Q9BWH6 1393 aaPredicted RBP12.83□□□□□ -0.36
MTHFD1-210ENST00000555252 SYCP1Q15431 976 aa12.82□□□□□ -0.36
MTHFD1-210ENST00000555252 PODXL2Q9NZ53 605 aa12.82□□□□□ -0.36
MTHFD1-210ENST00000555252 USP25Q9UHP3 1055 aa12.82□□□□□ -0.36
MTHFD1-210ENST00000555252 ZNF530Q6P9A1 599 aaPredicted RBP12.82□□□□□ -0.36
MTHFD1-210ENST00000555252 ATP6V1DQ9Y5K8 247 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms