RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 BABAM1Q9NWV8 329 aa15.73■□□□□ 0.11
RIPK3-204ENST00000554756 UBR2Q8IWV8 1755 aa15.73■□□□□ 0.11
RIPK3-204ENST00000554756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.72■□□□□ 0.11
RIPK3-204ENST00000554756 ZBTB7AO95365 584 aa15.72■□□□□ 0.11
RIPK3-204ENST00000554756 STARD3NLO95772 234 aa15.72■□□□□ 0.11
RIPK3-204ENST00000554756 IFT57Q9NWB7 429 aa15.72■□□□□ 0.11
RIPK3-204ENST00000554756 RTCBQ9Y3I0 505 aaKnown RBP15.72■□□□□ 0.11
RIPK3-204ENST00000554756 TAF1LQ8IZX4 1826 aa15.72■□□□□ 0.11
RIPK3-204ENST00000554756 ZNF831Q5JPB2 1677 aa15.72■□□□□ 0.11
RIPK3-204ENST00000554756 RPS6KA4O75676 772 aa15.72■□□□□ 0.11
RIPK3-204ENST00000554756 CANXP27824 592 aaKnown RBP15.72■□□□□ 0.11
RIPK3-204ENST00000554756 GNAI1P63096 354 aa15.72■□□□□ 0.11
RIPK3-204ENST00000554756 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
RIPK3-204ENST00000554756 MBIPQ9NS73 344 aa15.72■□□□□ 0.11
RIPK3-204ENST00000554756 GIGYF1O75420 1035 aaPredicted RBP15.71■□□□□ 0.11
RIPK3-204ENST00000554756 A1BGP04217 495 aa15.71■□□□□ 0.11
RIPK3-204ENST00000554756 ZNF853P0CG23 659 aa15.71■□□□□ 0.11
RIPK3-204ENST00000554756 KRT24Q2M2I5 525 aa15.71■□□□□ 0.11
RIPK3-204ENST00000554756 ZBTB1Q9Y2K1 713 aa15.71■□□□□ 0.11
RIPK3-204ENST00000554756 PIP4K2AP48426 406 aaPredicted RBP15.7■□□□□ 0.1
RIPK3-204ENST00000554756 FLAD1Q8NFF5 587 aa15.7■□□□□ 0.1
RIPK3-204ENST00000554756 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
RIPK3-204ENST00000554756 KDM3BQ7LBC6 1761 aa15.7■□□□□ 0.1
RIPK3-204ENST00000554756 SSFA2P28290 1259 aa15.7■□□□□ 0.1
RIPK3-204ENST00000554756 TRAPPC3LQ5T215 181 aa15.7■□□□□ 0.1
RIPK3-204ENST00000554756 COL5A3P25940 1745 aaPredicted RBP15.69■□□□□ 0.1
RIPK3-204ENST00000554756 NGEFQ8N5V2 710 aa15.69■□□□□ 0.1
RIPK3-204ENST00000554756 TSR2Q969E8 191 aaKnown RBP15.69■□□□□ 0.1
RIPK3-204ENST00000554756 CICQ96RK0 1608 aaPredicted RBP15.68■□□□□ 0.1
RIPK3-204ENST00000554756 WDR63Q8IWG1 891 aa15.68■□□□□ 0.1
RIPK3-204ENST00000554756 ARHGEF1Q92888 912 aaKnown RBP15.68■□□□□ 0.1
RIPK3-204ENST00000554756 TSHZ2Q9NRE2 1034 aa15.68■□□□□ 0.1
RIPK3-204ENST00000554756 ZNF330Q9Y3S2 320 aaPredicted RBP15.68■□□□□ 0.1
RIPK3-204ENST00000554756 SOS1Q07889 1333 aaPredicted RBP15.68■□□□□ 0.1
RIPK3-204ENST00000554756 EIF2S2P20042 333 aaKnown RBP15.67■□□□□ 0.1
RIPK3-204ENST00000554756 MSL1Q68DK7 614 aa15.67■□□□□ 0.1
RIPK3-204ENST00000554756 NECTIN2Q92692 538 aa15.67■□□□□ 0.1
RIPK3-204ENST00000554756 SRCAPQ6ZRS2 3230 aa15.67■□□□□ 0.1
RIPK3-204ENST00000554756 TUBGCP6Q96RT7 1819 aa15.67■□□□□ 0.1
RIPK3-204ENST00000554756 IL16Q14005 1332 aa15.67■□□□□ 0.1
RIPK3-204ENST00000554756 RFC4P35249 363 aa15.67■□□□□ 0.1
RIPK3-204ENST00000554756 MTFR1LQ9H019 292 aa15.67■□□□□ 0.1
RIPK3-204ENST00000554756 CASZ1Q86V15 1759 aa15.66■□□□□ 0.1
RIPK3-204ENST00000554756 ELL2O00472 640 aaPredicted RBP15.66■□□□□ 0.1
RIPK3-204ENST00000554756 ADRA2BP18089 450 aa15.66■□□□□ 0.1
RIPK3-204ENST00000554756 SPON1Q9HCB6 807 aa15.66■□□□□ 0.1
RIPK3-204ENST00000554756 SPINK5Q9NQ38 1064 aaPredicted RBP15.66■□□□□ 0.1
RIPK3-204ENST00000554756 SRP68Q9UHB9 627 aaKnown RBP15.66■□□□□ 0.1
RIPK3-204ENST00000554756 DUSP27Q5VZP5 1158 aa15.65■□□□□ 0.1
RIPK3-204ENST00000554756 SLC16A10Q8TF71 515 aa15.65■□□□□ 0.1
RIPK3-204ENST00000554756 ARXQ96QS3 562 aa15.65■□□□□ 0.1
RIPK3-204ENST00000554756 UBR3Q6ZT12 1888 aa15.65■□□□□ 0.1
RIPK3-204ENST00000554756 NBPF26B4DH59 902 aa15.64■□□□□ 0.1
RIPK3-204ENST00000554756 NBPF10Q6P3W6 841 aaKnown RBP15.64■□□□□ 0.1
RIPK3-204ENST00000554756 NBPF15Q8N660 670 aa15.64■□□□□ 0.1
RIPK3-204ENST00000554756 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.1
RIPK3-204ENST00000554756 ZNF521Q96K83 1311 aa15.64■□□□□ 0.09
RIPK3-204ENST00000554756 MYH14Q7Z406 1995 aaKnown RBP15.64■□□□□ 0.09
RIPK3-204ENST00000554756 COL15A1P39059 1388 aa15.64■□□□□ 0.09
RIPK3-204ENST00000554756 EIF5P55010 431 aaKnown RBP15.64■□□□□ 0.09
RIPK3-204ENST00000554756 QSER1Q2KHR3 1735 aa15.64■□□□□ 0.09
RIPK3-204ENST00000554756 LRP5O75197 1615 aa15.63■□□□□ 0.09
RIPK3-204ENST00000554756 MYL6BP14649 208 aa15.63■□□□□ 0.09
RIPK3-204ENST00000554756 IL6STP40189 918 aaPredicted RBP15.63■□□□□ 0.09
RIPK3-204ENST00000554756 NPM2Q86SE8 214 aaKnown RBP15.63■□□□□ 0.09
RIPK3-204ENST00000554756 FANCIQ9NVI1 1328 aa15.63■□□□□ 0.09
RIPK3-204ENST00000554756 USPL1Q5W0Q7 1092 aa15.62■□□□□ 0.09
RIPK3-204ENST00000554756 TSPYL6Q8N831 410 aa15.62■□□□□ 0.09
RIPK3-204ENST00000554756 TBC1D2BQ9UPU7 963 aa15.62■□□□□ 0.09
RIPK3-204ENST00000554756 A0A087WZG4 1122 aa15.62■□□□□ 0.09
RIPK3-204ENST00000554756 ZPR1O75312 459 aa15.62■□□□□ 0.09
RIPK3-204ENST00000554756 ANXA1P04083 346 aa15.62■□□□□ 0.09
RIPK3-204ENST00000554756 GOLGA2Q08379 1002 aa15.62■□□□□ 0.09
RIPK3-204ENST00000554756 HDGFL1Q5TGJ6 251 aa15.62■□□□□ 0.09
RIPK3-204ENST00000554756 MYH16Q9H6N6 1097 aa15.62■□□□□ 0.09
RIPK3-204ENST00000554756 USP42Q9H9J4 1324 aaKnown RBP15.61■□□□□ 0.09
RIPK3-204ENST00000554756 GYS1P13807 737 aa15.61■□□□□ 0.09
RIPK3-204ENST00000554756 PTGER2P43116 358 aa15.61■□□□□ 0.09
RIPK3-204ENST00000554756 HOXB7P09629 217 aa15.6■□□□□ 0.09
RIPK3-204ENST00000554756 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
RIPK3-204ENST00000554756 PROSER3Q2NL68 480 aa15.6■□□□□ 0.09
RIPK3-204ENST00000554756 DZIP3Q86Y13 1208 aaKnown RBP15.6■□□□□ 0.09
RIPK3-204ENST00000554756 CDCA7LQ96GN5 454 aa15.6■□□□□ 0.09
RIPK3-204ENST00000554756 NARFQ9UHQ1 456 aa15.6■□□□□ 0.09
RIPK3-204ENST00000554756 POLD1P28340 1107 aa15.59■□□□□ 0.09
RIPK3-204ENST00000554756 EXOSC9Q06265 439 aaKnown RBP15.59■□□□□ 0.09
RIPK3-204ENST00000554756 PDIA6Q15084 440 aa15.59■□□□□ 0.09
RIPK3-204ENST00000554756 PPP1R1BQ9UD71 204 aaPredicted RBP15.59■□□□□ 0.09
RIPK3-204ENST00000554756 LAMB4A4D0S4 1761 aa15.59■□□□□ 0.09
RIPK3-204ENST00000554756 SGIP1Q9BQI5 828 aa15.59■□□□□ 0.09
RIPK3-204ENST00000554756 CHPF2Q9P2E5 772 aa15.59■□□□□ 0.09
RIPK3-204ENST00000554756 ERBB4Q15303 1308 aa15.59■□□□□ 0.09
RIPK3-204ENST00000554756 TCERG1O14776 1098 aaKnown RBP15.58■□□□□ 0.08
RIPK3-204ENST00000554756 TWISTNBQ3B726 338 aaPredicted RBP15.58■□□□□ 0.08
RIPK3-204ENST00000554756 NLGN1Q8N2Q7 840 aa15.58■□□□□ 0.08
RIPK3-204ENST00000554756 BCL2L12Q9HB09 334 aa15.58■□□□□ 0.08
RIPK3-204ENST00000554756 E9PSI1 815 aa15.57■□□□□ 0.08
RIPK3-204ENST00000554756 SLFN5Q08AF3 891 aa15.57■□□□□ 0.08
RIPK3-204ENST00000554756 TTLL7Q6ZT98 887 aa15.57■□□□□ 0.08
RIPK3-204ENST00000554756 RCAN3Q9UKA8 241 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms