RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 WASF2Q9Y6W5 498 aa7.52□□□□□ -1.21
ATXN3-229ENST00000554672 RIMS2Q9UQ26 1411 aa7.52□□□□□ -1.21
ATXN3-229ENST00000554672 ANKRD30AQ9BXX3 1397 aa7.51□□□□□ -1.21
ATXN3-229ENST00000554672 CLK2P49760 499 aaKnown RBP7.51□□□□□ -1.21
ATXN3-229ENST00000554672 NFX1Q12986 1120 aaKnown RBP7.51□□□□□ -1.21
ATXN3-229ENST00000554672 LCE2CQ5TA81 110 aa7.51□□□□□ -1.21
ATXN3-229ENST00000554672 CCDC125Q86Z20 511 aa7.51□□□□□ -1.21
ATXN3-229ENST00000554672 GPBP1L1Q9HC44 474 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-229ENST00000554672 PIK3C2BO00750 1634 aa7.51□□□□□ -1.21
ATXN3-229ENST00000554672 LMTK2Q8IWU2 1503 aa7.51□□□□□ -1.21
ATXN3-229ENST00000554672 NWD1Q149M9 1564 aa7.5□□□□□ -1.21
ATXN3-229ENST00000554672 SETD1AO15047 1707 aaKnown RBP7.5□□□□□ -1.21
ATXN3-229ENST00000554672 PHLPP1O60346 1717 aa7.5□□□□□ -1.21
ATXN3-229ENST00000554672 COL16A1Q07092 1604 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-229ENST00000554672 CAPN5O15484 640 aaPredicted RBP7.5□□□□□ -1.21
ATXN3-229ENST00000554672 BMP1P13497 986 aa7.5□□□□□ -1.21
ATXN3-229ENST00000554672 TSC1Q92574 1164 aa7.5□□□□□ -1.21
ATXN3-229ENST00000554672 SENP2Q9HC62 589 aa7.5□□□□□ -1.21
ATXN3-229ENST00000554672 ZFYVE9O95405 1425 aa7.5□□□□□ -1.21
ATXN3-229ENST00000554672 SETD5Q9C0A6 1442 aa7.5□□□□□ -1.21
ATXN3-229ENST00000554672 ATAD2Q6PL18 1390 aa7.49□□□□□ -1.21
ATXN3-229ENST00000554672 ADAMTS2O95450 1211 aa7.49□□□□□ -1.21
ATXN3-229ENST00000554672 CDK15Q96Q40 435 aa7.49□□□□□ -1.21
ATXN3-229ENST00000554672 KLF16Q9BXK1 252 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-229ENST00000554672 RSPH6AQ9H0K4 717 aa7.49□□□□□ -1.21
ATXN3-229ENST00000554672 TRPC5Q9UL62 973 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-229ENST00000554672 RGS12O14924 1447 aa7.48□□□□□ -1.21
ATXN3-229ENST00000554672 NNTQ13423 1086 aa7.48□□□□□ -1.21
ATXN3-229ENST00000554672 ADAMTS13Q76LX8 1427 aa7.48□□□□□ -1.21
ATXN3-229ENST00000554672 FNBP4Q8N3X1 1017 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-229ENST00000554672 FAM117AQ9C073 453 aa7.48□□□□□ -1.21
ATXN3-229ENST00000554672 KDM4CQ9H3R0 1056 aa7.48□□□□□ -1.21
ATXN3-229ENST00000554672 USP21Q9UK80 565 aa7.48□□□□□ -1.21
ATXN3-229ENST00000554672 AHDC1Q5TGY3 1603 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-229ENST00000554672 KDM5AP29375 1690 aaKnown RBP7.47□□□□□ -1.21
ATXN3-229ENST00000554672 ADGRB3O60242 1522 aa7.47□□□□□ -1.21
ATXN3-229ENST00000554672 CFAP65Q6ZU64 1925 aaKnown RBP7.47□□□□□ -1.21
ATXN3-229ENST00000554672 DAPK1P53355 1430 aa7.47□□□□□ -1.21
ATXN3-229ENST00000554672 PLEKHG3A1L390 1219 aa7.47□□□□□ -1.21
ATXN3-229ENST00000554672 SLC24A1O60721 1099 aa7.47□□□□□ -1.21
ATXN3-229ENST00000554672 WFS1O76024 890 aa7.47□□□□□ -1.21
ATXN3-229ENST00000554672 CTDSPL2Q05D32 466 aa7.47□□□□□ -1.21
ATXN3-229ENST00000554672 PROCA1Q8NCQ7 364 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-229ENST00000554672 FAM174AQ8TBP5 190 aa7.47□□□□□ -1.21
ATXN3-229ENST00000554672 KIFC2Q96AC6 838 aa7.47□□□□□ -1.21
ATXN3-229ENST00000554672 RPRD2Q5VT52 1461 aaKnown RBP7.47□□□□□ -1.21
ATXN3-229ENST00000554672 CEP152O94986 1710 aa7.47□□□□□ -1.21
ATXN3-229ENST00000554672 DCCP43146 1447 aa7.46□□□□□ -1.21
ATXN3-229ENST00000554672 VPS8Q8N3P4 1428 aa7.46□□□□□ -1.21
ATXN3-229ENST00000554672 TIMP2P16035 220 aa7.46□□□□□ -1.22
ATXN3-229ENST00000554672 GRM5P41594 1212 aa7.46□□□□□ -1.22
ATXN3-229ENST00000554672 SH3RF1Q7Z6J0 888 aa7.46□□□□□ -1.22
ATXN3-229ENST00000554672 DDX17Q92841 729 aaKnown RBP7.46□□□□□ -1.22
ATXN3-229ENST00000554672 PNPLA6Q8IY17 1366 aa7.46□□□□□ -1.22
ATXN3-229ENST00000554672 TERTO14746 1132 aaKnown RBP7.45□□□□□ -1.22
ATXN3-229ENST00000554672 ADH1CP00326 375 aa7.45□□□□□ -1.22
ATXN3-229ENST00000554672 NR3C2P08235 984 aa7.45□□□□□ -1.22
ATXN3-229ENST00000554672 SKIV2LQ15477 1246 aaKnown RBP7.45□□□□□ -1.22
ATXN3-229ENST00000554672 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.45□□□□□ -1.22
ATXN3-229ENST00000554672 C1QTNF2Q9BXJ5 285 aa7.45□□□□□ -1.22
ATXN3-229ENST00000554672 PTPRUQ92729 1446 aa7.44□□□□□ -1.22
ATXN3-229ENST00000554672 ARID5BQ14865 1188 aa7.44□□□□□ -1.22
ATXN3-229ENST00000554672 SH3BP5LQ7L8J4 393 aa7.44□□□□□ -1.22
ATXN3-229ENST00000554672 HELBQ8NG08 1087 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-229ENST00000554672 ZFP42Q96MM3 310 aa7.44□□□□□ -1.22
ATXN3-229ENST00000554672 SOS2Q07890 1332 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-229ENST00000554672 SHPRHQ149N8 1683 aa7.44□□□□□ -1.22
ATXN3-229ENST00000554672 MST1RQ04912 1400 aa7.44□□□□□ -1.22
ATXN3-229ENST00000554672 ANKRD50Q9ULJ7 1429 aa7.44□□□□□ -1.22
ATXN3-229ENST00000554672 DIP2AQ14689 1571 aa7.43□□□□□ -1.22
ATXN3-229ENST00000554672 WDR4P57081 412 aaKnown RBP7.43□□□□□ -1.22
ATXN3-229ENST00000554672 AGERQ15109 404 aa7.43□□□□□ -1.22
ATXN3-229ENST00000554672 SH3D19Q5HYK7 790 aa7.43□□□□□ -1.22
ATXN3-229ENST00000554672 BPHLQ86WA6 291 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-229ENST00000554672 LRRN4Q8WUT4 740 aa7.43□□□□□ -1.22
ATXN3-229ENST00000554672 ASXL1Q8IXJ9 1541 aa7.42□□□□□ -1.22
ATXN3-229ENST00000554672 SRCAPQ6ZRS2 3230 aa7.42□□□□□ -1.22
ATXN3-229ENST00000554672 LOC105371045A0A1W2PR82 267 aa7.42□□□□□ -1.22
ATXN3-229ENST00000554672 FAM50AQ14320 339 aaKnown RBP7.42□□□□□ -1.22
ATXN3-229ENST00000554672 PPP2R2DQ66LE6 453 aa7.42□□□□□ -1.22
ATXN3-229ENST00000554672 ARMC2Q8NEN0 867 aa7.42□□□□□ -1.22
ATXN3-229ENST00000554672 ITPKCQ96DU7 683 aa7.42□□□□□ -1.22
ATXN3-229ENST00000554672 GJD4Q96KN9 370 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-229ENST00000554672 ORAI2Q96SN7 254 aa7.42□□□□□ -1.22
ATXN3-229ENST00000554672 ZFAND3Q9H8U3 227 aa7.42□□□□□ -1.22
ATXN3-229ENST00000554672 CHD2O14647 1828 aaKnown RBP7.42□□□□□ -1.22
ATXN3-229ENST00000554672 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-229ENST00000554672 SF3B2Q13435 895 aaKnown RBP7.41□□□□□ -1.22
ATXN3-229ENST00000554672 ZNF326Q5BKZ1 582 aaKnown RBP7.41□□□□□ -1.22
ATXN3-229ENST00000554672 MRPL14Q6P1L8 145 aaKnown RBP7.41□□□□□ -1.22
ATXN3-229ENST00000554672 METP08581 1390 aa7.41□□□□□ -1.22
ATXN3-229ENST00000554672 ATRNO75882 1429 aa7.41□□□□□ -1.22
ATXN3-229ENST00000554672 PTCH1Q13635 1447 aa7.41□□□□□ -1.22
ATXN3-229ENST00000554672 WIPF1O43516 503 aa7.4□□□□□ -1.22
ATXN3-229ENST00000554672 ZIC2O95409 532 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-229ENST00000554672 NR5A1Q13285 461 aa7.4□□□□□ -1.22
ATXN3-229ENST00000554672 DDRGK1Q96HY6 314 aa7.4□□□□□ -1.22
ATXN3-229ENST00000554672 TRPM2O94759 1503 aa7.4□□□□□ -1.22
ATXN3-229ENST00000554672 TMEM131LA2VDJ0 1609 aa7.39□□□□□ -1.23
ATXN3-229ENST00000554672 SETBP1Q9Y6X0 1596 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms