RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 DDX39AO00148 427 aaKnown RBP3.86□□□□□ -1.79
SYNE2-212ENST00000554584 PRPF40AO75400 957 aaKnown RBP3.86□□□□□ -1.79
SYNE2-212ENST00000554584 SCHIP1Q9P0W5 487 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-212ENST00000554584 MXRA7P84157 204 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 AFAP1Q8N556 730 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 CAMK4Q16566 473 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 ADRA2BP18089 450 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 TPD52P55327 224 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-212ENST00000554584 POLR3GO15318 223 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-212ENST00000554584 ZRSR2Q15696 482 aaKnown RBP3.86□□□□□ -1.79
SYNE2-212ENST00000554584 ARHGAP27Q6ZUM4 889 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 MCM2P49736 904 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 SYNCQ9H7C4 482 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 SSX2IPQ9Y2D8 614 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 CEP83Q9Y592 693 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 GABPAQ06546 454 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 LARP1Q6PKG0 1096 aaKnown RBP3.86□□□□□ -1.79
SYNE2-212ENST00000554584 ZSWIM4Q9H7M6 989 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 POLR3EQ9NVU0 708 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 INPP5FQ9Y2H2 1132 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 MAEAQ7L5Y9 396 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 MPHOSPH9Q99550 1183 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 RASA3Q14644 834 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 LRSAM1Q6UWE0 723 aa3.86□□□□□ -1.79
SYNE2-212ENST00000554584 TSR3Q9UJK0 312 aaKnown RBP3.86□□□□□ -1.79
SYNE2-212ENST00000554584 KIAA1328Q86T90 577 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 CCDC89Q8N998 374 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 PPP1R14CQ8TAE6 165 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 RAB3IL1Q8TBN0 382 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 DDX11L8A8MPP1 907 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 GTPBP6O43824 516 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-212ENST00000554584 EIF5P55010 431 aaKnown RBP3.85□□□□□ -1.79
SYNE2-212ENST00000554584 ERC1Q8IUD2 1116 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 MAFGO15525 162 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 SDF4Q9BRK5 362 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 SPDYE16A6NNV3 312 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-212ENST00000554584 ST18O60284 1047 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 ARPP19P56211 112 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 SPDYE2Q495Y8 402 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 MPHOSPH8Q99549 860 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 TRIM6Q9C030 488 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-212ENST00000554584 NME9Q86XW9 330 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 DYDC1Q8WWB3 177 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 SMAD5Q99717 465 aaKnown RBP3.85□□□□□ -1.79
SYNE2-212ENST00000554584 MOSPD1Q9UJG1 213 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 TCERG1LQ5VWI1 586 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 SWAP70Q9UH65 585 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 FANCIQ9NVI1 1328 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 RXRAP19793 462 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 CCDC69A6NI79 296 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 BIN1O00499 593 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 BMS1Q14692 1282 aaKnown RBP3.85□□□□□ -1.79
SYNE2-212ENST00000554584 SMAD1Q15797 465 aaKnown RBP3.85□□□□□ -1.79
SYNE2-212ENST00000554584 SESTD1Q86VW0 696 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 WDHD1O75717 1129 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-212ENST00000554584 CCDC175P0C221 793 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 NBPF1Q3BBV0 1214 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 TMEM259Q4ZIN3 620 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 CFAP58Q5T655 872 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 ANO1Q5XXA6 986 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 GPATCH11Q8N954 259 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 KIF5CO60282 957 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 MORC4Q8TE76 937 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 ZNF692Q9BU19 519 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-212ENST00000554584 APOL6Q9BWW8 343 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 INCENPQ9NQS7 918 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 CCDC102AQ96A19 550 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 TNNQ9UQP3 1299 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 BCS1LQ9Y276 419 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 hCG_1642624A0A1W2PR95 340 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 PHACTR2O75167 634 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 HDGFP51858 240 aaKnown RBP3.85□□□□□ -1.79
SYNE2-212ENST00000554584 AACSQ86V21 672 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 RUSC2Q8N2Y8 1516 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 NLRP5P59047 1200 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 BEGAINQ9BUH8 593 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 EXOC6BQ9Y2D4 811 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 CEP162Q5TB80 1403 aa3.85□□□□□ -1.79
SYNE2-212ENST00000554584 ALKBH8Q96BT7 664 aaKnown RBP3.85□□□□□ -1.79
SYNE2-212ENST00000554584 FAM83GA6ND36 823 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 TTLL3Q9Y4R7 772 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 PDE4AP27815 886 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 LRRFIP1Q32MZ4 808 aaKnown RBP3.84□□□□□ -1.79
SYNE2-212ENST00000554584 FAM200AQ8TCP9 573 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 SEPT14Q6ZU15 432 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 SUFUQ9UMX1 484 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 DDAH1O94760 285 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 SEMA3FQ13275 785 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 EEF2P13639 858 aaKnown RBP3.84□□□□□ -1.79
SYNE2-212ENST00000554584 METTL24Q5JXM2 366 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 PDZRN3Q9UPQ7 1066 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 MAP2K1Q02750 393 aaPredicted RBP3.84□□□□□ -1.79
SYNE2-212ENST00000554584 BRMS1Q9HCU9 246 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 AFG3L2Q9Y4W6 797 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 CWC15Q9P013 229 aaKnown RBP3.84□□□□□ -1.79
SYNE2-212ENST00000554584 AAMPQ13685 434 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 CCDC174Q6PII3 467 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 GANCQ8TET4 914 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 BNIP3LO60238 219 aa3.84□□□□□ -1.79
SYNE2-212ENST00000554584 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms